Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6303
Gene name
LocationContig_321:9779..10147
Strand-
Gene length (bp)368
Transcript length (bp)240
Coding sequence length (bp)240
Protein length (aa) 80

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05251 Ost5 Oligosaccharyltransferase subunit 5 1.2E-17 15 79

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006487 protein N-linked glycosylation Yes
GO:0034998 oligosaccharyltransferase I complex Yes
GO:0044446 intracellular organelle part No
GO:0006464 cellular protein modification process No
GO:0009987 cellular process No
GO:1901564 organonitrogen compound metabolic process No
GO:0032991 protein-containing complex No
GO:0006486 protein glycosylation No
GO:1990234 transferase complex No
GO:0044424 intracellular part No
GO:0044432 endoplasmic reticulum part No
GO:0019538 protein metabolic process No
GO:0044444 cytoplasmic part No
GO:0044464 cell part No
GO:0044425 membrane part No
GO:0043412 macromolecule modification No
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1902494 catalytic complex No
GO:0043413 macromolecule glycosylation No
GO:0071704 organic substance metabolic process No
GO:0070085 glycosylation No
GO:0006807 nitrogen compound metabolic process No
GO:0044238 primary metabolic process No
GO:0044267 cellular protein metabolic process No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0044260 cellular macromolecule metabolic process No
GO:0008250 oligosaccharyltransferase complex No
GO:0036211 protein modification process No
GO:0044422 organelle part No
GO:0098796 membrane protein complex No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 24 46 22
2 53 75 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6303
MDSSLHEVWQAAAGSPFLPVVGKGTQFLVGFVLLLSGLAATGVFALNRSLVNLAVIGVPASLAFAFGVVYMFCAV
GVYV*
Coding >Hirsu2|6303
ATGGATTCTTCGCTGCATGAGGTCTGGCAAGCCGCTGCGGGCAGCCCGTTCCTCCCCGTCGTCGGCAAGGGGACT
CAGTTCCTCGTGGGATTCGTGCTTCTATTGTCGGGTCTCGCAGCCACGGGCGTCTTCGCCCTGAACCGTTCCCTC
GTCAACCTCGCCGTCATCGGCGTCCCGGCTTCGCTGGCGTTTGCATTTGGAGTCGTCTATATGTTCTGCGCCGTC
GGGGTATACGTTTGA
Transcript >Hirsu2|6303
ATGGATTCTTCGCTGCATGAGGTCTGGCAAGCCGCTGCGGGCAGCCCGTTCCTCCCCGTCGTCGGCAAGGGGACT
CAGTTCCTCGTGGGATTCGTGCTTCTATTGTCGGGTCTCGCAGCCACGGGCGTCTTCGCCCTGAACCGTTCCCTC
GTCAACCTCGCCGTCATCGGCGTCCCGGCTTCGCTGGCGTTTGCATTTGGAGTCGTCTATATGTTCTGCGCCGTC
GGGGTATACGTTTGA
Gene >Hirsu2|6303
ATGGATTCTTCGCTGCATGAGGTCTGGCAAGCCGCTGCGGGCAGCCCGTTCCTCCCCGTCGTCGGCAAGGGGACT
CAGTTCCTCGTGGGATTCGTGCTTCTATTGTCGGGTCTCGCAGCCACGGGCGTCTTCGCCCTGAGTGCGTTTCCC
CCGCCTAAGGGACCCGCAGCAGACATCTGAGGTCTCGCATCTAACCCCTGGAAATGCAGACCGTTCCCTCGTCAA
CCTCGCCGTCATCGGCGTCCCGGCTTCGCTGGCGTTTGCGTATGTGGCTCCCCGAGGACGTCGTCGTCCCCGTGG
CCGGCAGCTGACCCGTGCGTAGATTTGGAGTCGTCTATATGTTCTGCGCCGTCGGGGTATACGTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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