Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|63
Gene name
LocationContig_1006:8350..9004
Strand+
Gene length (bp)654
Transcript length (bp)507
Coding sequence length (bp)507
Protein length (aa) 169

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04419 4F5 4F5 protein related disordered region 5.1E-09 107 142

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5657 0.4549 0.1339 0.1001 0.2337 0.0828 0.2591 0.0644 0.092 0.041

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7081
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-rufipedis Ophun1|1520
Ophiocordyceps subramaniannii Hirsu2|63 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|63
MPVLPQRVGSEGTGTFSPTSPAAPLIEILSTLYFSTAPHPSCRALIGSPSAAPPPLRHGPGQGFGFESFDHLSIW
HQRKRLSLSVHLRLRLPPAARSPPRPSRPIAMARGNQREKSREANLKKQAALKKGNNLSGTEMQRAKEQAADIMR
QKQAAAEAKKAAATSSGK*
Coding >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC
CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA
Transcript >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC
CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA
Gene >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGGTCCGTCCTCTCCACCCCTCCCCCCCCCATCGTCGCTCGGCTGGCTGACCGGACCGCTCGCACCGGGCG
GCTACAGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCG
CCAGAAGCAGGCTGCTGGTAAACGCCGCACCACACCCCGGGAAAATCTCCCTTGCTTGTGCATGCCCGCTGACGC
TCGGGGGGAACAGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail