Protein ID | Hirsu2|63 |
Gene name | |
Location | Contig_1006:8350..9004 |
Strand | + |
Gene length (bp) | 654 |
Transcript length (bp) | 507 |
Coding sequence length (bp) | 507 |
Protein length (aa) | 169 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04419 | 4F5 | 4F5 protein related disordered region | 5.1E-09 | 107 | 142 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5657 | 0.4549 | 0.1339 | 0.1001 | 0.2337 | 0.0828 | 0.2591 | 0.0644 | 0.092 | 0.041 |
Orthofinder run ID | 4 |
Orthogroup | 7081 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps camponoti-rufipedis | Ophun1|1520 |
Ophiocordyceps subramaniannii | Hirsu2|63 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|63 MPVLPQRVGSEGTGTFSPTSPAAPLIEILSTLYFSTAPHPSCRALIGSPSAAPPPLRHGPGQGFGFESFDHLSIW HQRKRLSLSVHLRLRLPPAARSPPRPSRPIAMARGNQREKSREANLKKQAALKKGNNLSGTEMQRAKEQAADIMR QKQAAAEAKKAAATSSGK* |
Coding | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |
Transcript | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |
Gene | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGGTCCGTCCTCTCCACCCCTCCCCCCCCCATCGTCGCTCGGCTGGCTGACCGGACCGCTCGCACCGGGCG GCTACAGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCG CCAGAAGCAGGCTGCTGGTAAACGCCGCACCACACCCCGGGAAAATCTCCCTTGCTTGTGCATGCCCGCTGACGC TCGGGGGGAACAGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |