© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|63 |
| Gene name | |
| Location | Contig_1006:8350..9004 |
| Strand | + |
| Gene length (bp) | 654 |
| Transcript length (bp) | 507 |
| Coding sequence length (bp) | 507 |
| Protein length (aa) | 169 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04419 | 4F5 | 4F5 protein related disordered region | 5.1E-09 | 107 | 142 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5657 | 0.4549 | 0.1339 | 0.1001 | 0.2337 | 0.0828 | 0.2591 | 0.0644 | 0.092 | 0.041 |
| Orthofinder run ID | 4 |
| Orthogroup | 7081 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-rufipedis | Ophun1|1520 |
| Ophiocordyceps subramaniannii | Hirsu2|63 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|63 MPVLPQRVGSEGTGTFSPTSPAAPLIEILSTLYFSTAPHPSCRALIGSPSAAPPPLRHGPGQGFGFESFDHLSIW HQRKRLSLSVHLRLRLPPAARSPPRPSRPIAMARGNQREKSREANLKKQAALKKGNNLSGTEMQRAKEQAADIMR QKQAAAEAKKAAATSSGK* |
| Coding | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |
| Transcript | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |
| Gene | >Hirsu2|63 ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC GCCTTGGTCCGTCCTCTCCACCCCTCCCCCCCCCATCGTCGCTCGGCTGGCTGACCGGACCGCTCGCACCGGGCG GCTACAGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCG CCAGAAGCAGGCTGCTGGTAAACGCCGCACCACACCCCGGGAAAATCTCCCTTGCTTGTGCATGCCCGCTGACGC TCGGGGGGAACAGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA |