Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|63
Gene name
LocationContig_1006:8350..9004
Strand+
Gene length (bp)654
Transcript length (bp)507
Coding sequence length (bp)507
Protein length (aa) 169

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04419 4F5 4F5 protein family 4.7E-09 107 142

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|63
MPVLPQRVGSEGTGTFSPTSPAAPLIEILSTLYFSTAPHPSCRALIGSPSAAPPPLRHGPGQGFGFESFDHLSIW
HQRKRLSLSVHLRLRLPPAARSPPRPSRPIAMARGNQREKSREANLKKQAALKKGNNLSGTEMQRAKEQAADIMR
QKQAAAEAKKAAATSSGK*
Coding >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC
CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA
Transcript >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCGC
CAGAAGCAGGCTGCTGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA
Gene >Hirsu2|63
ATGCCCGTCTTACCGCAGCGGGTCGGAAGTGAAGGTACAGGTACTTTCTCCCCGACCTCTCCTGCTGCGCCACTC
ATCGAAATCCTCAGTACTCTCTACTTCAGCACCGCCCCTCATCCCTCGTGCCGCGCCCTCATTGGCTCTCCCTCC
GCTGCACCGCCCCCCCTCCGTCACGGCCCAGGTCAAGGCTTCGGTTTCGAGTCTTTCGACCATCTATCGATCTGG
CATCAACGGAAGCGTCTCTCTCTCTCCGTCCATCTCCGTCTCCGTCTGCCGCCTGCTGCTCGCTCGCCCCCTCGT
CCGTCCCGCCCCATCGCCATGGCCCGCGGCAACCAGCGTGAGAAGTCCCGCGAGGCCAACCTCAAGAAACAGGCC
GCCTTGGTCCGTCCTCTCCACCCCTCCCCCCCCCATCGTCGCTCGGCTGGCTGACCGGACCGCTCGCACCGGGCG
GCTACAGAAAAAGGGCAACAACCTGAGCGGCACCGAGATGCAGCGCGCCAAGGAGCAGGCCGCCGACATCATGCG
CCAGAAGCAGGCTGCTGGTAAACGCCGCACCACACCCCGGGAAAATCTCCCTTGCTTGTGCATGCCCGCTGACGC
TCGGGGGGAACAGCCGAGGCGAAGAAGGCGGCGGCAACCTCGTCCGGCAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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