Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6293
Gene name
LocationContig_320:16458..18132
Strand-
Gene length (bp)1674
Transcript length (bp)1674
Coding sequence length (bp)1674
Protein length (aa) 558

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 47 69 22
2 119 141 22
3 494 516 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6293
MVITAAWQGPGTYSLWKIFSYPAEGGPRAAFAVPTSVGHTLTSAYTVMLTLLMVNFWTIVISLVAYGLWKYRSQK
PHPLLPALWNKRASLFDSIIETYQYSKGSGPAQKDNGDEEPKKAWRLLLLLLVLLAYLGQTAMTVVVPPKLILGG
AAPVKPEAIYVPVVRELEDNFTTATRYGLEIPPALRALGSVDLANVELRNKVSVSQAISDGQWNGSEPIQRVDYE
YRVTGADLGLQRYPDLALTVTGSCRTEYNWHNRTEKRRIGRVSVSVDFYQAFGGEYDVSVFDGAETLAKFVLGRE
PSKGTLERSNASWAAFVSSVDRTSFSPGSDPWYRTTSTGSTSTGTAYTVNPARPALSCWQDDVWSYRGRTSTAVN
LDQIPELQLSQGMRIVLARLMASPMIQHIGSRLGPSSLKSSTTAIGQIFDAQHSSFQADLERLVLASYIATSNIL
TDSTLYPPGADSVVPNLVKASNGQVSDSVADFIVWSPEVSALDLTVVVVIPCFLTVLWLAALVLLCCRPLNIVGA
LDSKKMFQVLMTEYPDATLKQGTESGKPEWDL*
Coding >Hirsu2|6293
ATGGTCATCACGGCGGCCTGGCAAGGGCCGGGAACGTACTCACTGTGGAAGATCTTCTCCTACCCGGCCGAAGGC
GGGCCCAGAGCTGCCTTTGCCGTGCCCACGTCCGTTGGCCACACCCTCACGTCGGCCTACACTGTGATGCTCACC
CTCCTGATGGTCAATTTCTGGACCATTGTCATCAGCCTCGTGGCCTACGGTCTTTGGAAGTATCGCAGCCAGAAA
CCGCACCCATTGTTGCCGGCACTGTGGAACAAGAGGGCTAGCCTCTTCGATTCCATCATCGAGACGTACCAGTAC
AGTAAGGGCTCCGGGCCGGCTCAGAAGGACAACGGGGATGAAGAGCCGAAGAAAGCCTGGCGTCTTCTCTTGCTG
CTCCTGGTCCTCCTGGCGTATCTCGGCCAGACGGCCATGACTGTCGTGGTTCCGCCGAAGCTCATCCTCGGCGGC
GCGGCGCCCGTCAAGCCGGAGGCTATCTACGTCCCGGTCGTCAGAGAGCTCGAGGACAACTTCACGACTGCGACC
CGATACGGGTTGGAGATACCGCCTGCCCTCCGCGCACTGGGCAGCGTGGACCTGGCAAACGTCGAGCTCCGGAAC
AAGGTCAGCGTGAGCCAGGCGATCTCGGACGGGCAATGGAACGGCAGCGAGCCGATCCAGCGGGTCGATTACGAG
TATCGAGTCACCGGCGCGGACCTCGGGCTGCAGCGATATCCAGACCTCGCTCTCACAGTGACCGGCTCGTGCAGG
ACCGAGTACAACTGGCACAACAGAACGGAAAAGAGGAGAATCGGCCGTGTTTCCGTTTCGGTGGATTTCTATCAA
GCGTTCGGCGGGGAATACGACGTGTCCGTCTTCGACGGTGCCGAGACTCTGGCCAAGTTCGTCCTGGGGAGAGAG
CCGAGCAAAGGCACGCTCGAAAGAAGCAACGCCAGCTGGGCGGCGTTCGTTTCGTCAGTCGACCGAACGAGCTTC
AGCCCAGGCAGTGACCCTTGGTATCGCACCACGTCGACCGGGTCCACCAGCACGGGCACCGCTTACACCGTCAAC
CCGGCCCGGCCGGCTCTCTCGTGCTGGCAGGACGATGTCTGGTCGTACAGGGGCCGCACCAGCACCGCCGTGAAT
CTGGATCAGATCCCCGAGCTGCAGCTGTCCCAGGGAATGCGGATCGTCCTGGCTCGCCTCATGGCCTCGCCCATG
ATACAGCACATAGGCAGCCGCCTTGGGCCCTCTTCGCTCAAGTCTTCGACGACGGCCATTGGCCAGATCTTCGAC
GCCCAGCATAGCAGTTTCCAGGCCGACCTGGAGCGTCTGGTGCTGGCGTCTTACATCGCCACGAGCAACATCCTC
ACGGATTCAACACTGTACCCTCCCGGCGCGGACAGCGTGGTGCCCAATCTCGTCAAGGCCAGCAACGGCCAGGTC
AGCGATAGTGTCGCCGACTTTATCGTCTGGAGCCCAGAGGTTTCTGCCTTGGACCTCACCGTCGTCGTCGTCATC
CCGTGCTTCCTTACCGTTCTCTGGCTGGCAGCCCTCGTATTACTATGCTGCAGACCACTGAATATTGTCGGCGCC
CTCGACTCGAAGAAAATGTTCCAGGTCTTGATGACTGAATATCCAGACGCGACCCTGAAGCAAGGAACGGAAAGT
GGCAAGCCAGAATGGGACCTGTAA
Transcript >Hirsu2|6293
ATGGTCATCACGGCGGCCTGGCAAGGGCCGGGAACGTACTCACTGTGGAAGATCTTCTCCTACCCGGCCGAAGGC
GGGCCCAGAGCTGCCTTTGCCGTGCCCACGTCCGTTGGCCACACCCTCACGTCGGCCTACACTGTGATGCTCACC
CTCCTGATGGTCAATTTCTGGACCATTGTCATCAGCCTCGTGGCCTACGGTCTTTGGAAGTATCGCAGCCAGAAA
CCGCACCCATTGTTGCCGGCACTGTGGAACAAGAGGGCTAGCCTCTTCGATTCCATCATCGAGACGTACCAGTAC
AGTAAGGGCTCCGGGCCGGCTCAGAAGGACAACGGGGATGAAGAGCCGAAGAAAGCCTGGCGTCTTCTCTTGCTG
CTCCTGGTCCTCCTGGCGTATCTCGGCCAGACGGCCATGACTGTCGTGGTTCCGCCGAAGCTCATCCTCGGCGGC
GCGGCGCCCGTCAAGCCGGAGGCTATCTACGTCCCGGTCGTCAGAGAGCTCGAGGACAACTTCACGACTGCGACC
CGATACGGGTTGGAGATACCGCCTGCCCTCCGCGCACTGGGCAGCGTGGACCTGGCAAACGTCGAGCTCCGGAAC
AAGGTCAGCGTGAGCCAGGCGATCTCGGACGGGCAATGGAACGGCAGCGAGCCGATCCAGCGGGTCGATTACGAG
TATCGAGTCACCGGCGCGGACCTCGGGCTGCAGCGATATCCAGACCTCGCTCTCACAGTGACCGGCTCGTGCAGG
ACCGAGTACAACTGGCACAACAGAACGGAAAAGAGGAGAATCGGCCGTGTTTCCGTTTCGGTGGATTTCTATCAA
GCGTTCGGCGGGGAATACGACGTGTCCGTCTTCGACGGTGCCGAGACTCTGGCCAAGTTCGTCCTGGGGAGAGAG
CCGAGCAAAGGCACGCTCGAAAGAAGCAACGCCAGCTGGGCGGCGTTCGTTTCGTCAGTCGACCGAACGAGCTTC
AGCCCAGGCAGTGACCCTTGGTATCGCACCACGTCGACCGGGTCCACCAGCACGGGCACCGCTTACACCGTCAAC
CCGGCCCGGCCGGCTCTCTCGTGCTGGCAGGACGATGTCTGGTCGTACAGGGGCCGCACCAGCACCGCCGTGAAT
CTGGATCAGATCCCCGAGCTGCAGCTGTCCCAGGGAATGCGGATCGTCCTGGCTCGCCTCATGGCCTCGCCCATG
ATACAGCACATAGGCAGCCGCCTTGGGCCCTCTTCGCTCAAGTCTTCGACGACGGCCATTGGCCAGATCTTCGAC
GCCCAGCATAGCAGTTTCCAGGCCGACCTGGAGCGTCTGGTGCTGGCGTCTTACATCGCCACGAGCAACATCCTC
ACGGATTCAACACTGTACCCTCCCGGCGCGGACAGCGTGGTGCCCAATCTCGTCAAGGCCAGCAACGGCCAGGTC
AGCGATAGTGTCGCCGACTTTATCGTCTGGAGCCCAGAGGTTTCTGCCTTGGACCTCACCGTCGTCGTCGTCATC
CCGTGCTTCCTTACCGTTCTCTGGCTGGCAGCCCTCGTATTACTATGCTGCAGACCACTGAATATTGTCGGCGCC
CTCGACTCGAAGAAAATGTTCCAGGTCTTGATGACTGAATATCCAGACGCGACCCTGAAGCAAGGAACGGAAAGT
GGCAAGCCAGAATGGGACCTGTAA
Gene >Hirsu2|6293
ATGGTCATCACGGCGGCCTGGCAAGGGCCGGGAACGTACTCACTGTGGAAGATCTTCTCCTACCCGGCCGAAGGC
GGGCCCAGAGCTGCCTTTGCCGTGCCCACGTCCGTTGGCCACACCCTCACGTCGGCCTACACTGTGATGCTCACC
CTCCTGATGGTCAATTTCTGGACCATTGTCATCAGCCTCGTGGCCTACGGTCTTTGGAAGTATCGCAGCCAGAAA
CCGCACCCATTGTTGCCGGCACTGTGGAACAAGAGGGCTAGCCTCTTCGATTCCATCATCGAGACGTACCAGTAC
AGTAAGGGCTCCGGGCCGGCTCAGAAGGACAACGGGGATGAAGAGCCGAAGAAAGCCTGGCGTCTTCTCTTGCTG
CTCCTGGTCCTCCTGGCGTATCTCGGCCAGACGGCCATGACTGTCGTGGTTCCGCCGAAGCTCATCCTCGGCGGC
GCGGCGCCCGTCAAGCCGGAGGCTATCTACGTCCCGGTCGTCAGAGAGCTCGAGGACAACTTCACGACTGCGACC
CGATACGGGTTGGAGATACCGCCTGCCCTCCGCGCACTGGGCAGCGTGGACCTGGCAAACGTCGAGCTCCGGAAC
AAGGTCAGCGTGAGCCAGGCGATCTCGGACGGGCAATGGAACGGCAGCGAGCCGATCCAGCGGGTCGATTACGAG
TATCGAGTCACCGGCGCGGACCTCGGGCTGCAGCGATATCCAGACCTCGCTCTCACAGTGACCGGCTCGTGCAGG
ACCGAGTACAACTGGCACAACAGAACGGAAAAGAGGAGAATCGGCCGTGTTTCCGTTTCGGTGGATTTCTATCAA
GCGTTCGGCGGGGAATACGACGTGTCCGTCTTCGACGGTGCCGAGACTCTGGCCAAGTTCGTCCTGGGGAGAGAG
CCGAGCAAAGGCACGCTCGAAAGAAGCAACGCCAGCTGGGCGGCGTTCGTTTCGTCAGTCGACCGAACGAGCTTC
AGCCCAGGCAGTGACCCTTGGTATCGCACCACGTCGACCGGGTCCACCAGCACGGGCACCGCTTACACCGTCAAC
CCGGCCCGGCCGGCTCTCTCGTGCTGGCAGGACGATGTCTGGTCGTACAGGGGCCGCACCAGCACCGCCGTGAAT
CTGGATCAGATCCCCGAGCTGCAGCTGTCCCAGGGAATGCGGATCGTCCTGGCTCGCCTCATGGCCTCGCCCATG
ATACAGCACATAGGCAGCCGCCTTGGGCCCTCTTCGCTCAAGTCTTCGACGACGGCCATTGGCCAGATCTTCGAC
GCCCAGCATAGCAGTTTCCAGGCCGACCTGGAGCGTCTGGTGCTGGCGTCTTACATCGCCACGAGCAACATCCTC
ACGGATTCAACACTGTACCCTCCCGGCGCGGACAGCGTGGTGCCCAATCTCGTCAAGGCCAGCAACGGCCAGGTC
AGCGATAGTGTCGCCGACTTTATCGTCTGGAGCCCAGAGGTTTCTGCCTTGGACCTCACCGTCGTCGTCGTCATC
CCGTGCTTCCTTACCGTTCTCTGGCTGGCAGCCCTCGTATTACTATGCTGCAGACCACTGAATATTGTCGGCGCC
CTCGACTCGAAGAAAATGTTCCAGGTCTTGATGACTGAATATCCAGACGCGACCCTGAAGCAAGGAACGGAAAGT
GGCAAGCCAGAATGGGACCTGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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