Protein ID | Hirsu2|6284 |
Gene name | |
Location | Contig_32:44012..45032 |
Strand | + |
Gene length (bp) | 1020 |
Transcript length (bp) | 1020 |
Coding sequence length (bp) | 1020 |
Protein length (aa) | 340 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01375 | Enterotoxin_a | Heat-labile enterotoxin alpha chain | 9.2E-15 | 179 | 323 |
GO Term | Description | Terminal node |
---|---|---|
GO:0090729 | toxin activity | Yes |
GO:0005615 | extracellular space | Yes |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0110165 | cellular anatomical entity | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1732 | 0.1109 | 0.8269 | 0.2001 | 0.0925 | 0.0404 | 0.575 | 0.4014 | 0.3294 | 0.0021 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 27 | 0.999785 |
Orthofinder run ID | 4 |
Orthogroup | 302 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6284 MTFYTRWATLVLSLALCVLQWPHHSFGLDPTPSSSPDSEPQPFGIPPPIEELEGYQSIDFENDLSSKDLGYSPKD HIQLAPPPKIVFRSGKLSPDEMRSRGGMYEGTLVPPTNANGGFSIFYHHCERLTHMTDPKRSRCSPPRHLERTIH LSEYRTATAYTATSRSFGVSLSFATREGPGWVYMIQATPNMIDVDGTLRNYRQYRNEQEFVALGGVHWGQVLRYI PVPGKLTAADFGKESPHEVTYTDFIKKFPNHTLTANPDYDPRFDNLTASPGEPQLAGWADRPAKVNKLEPWSRYQ NKTLGEYARDFMDSMSNEAKAALGWNGTFPLEFRSYPKH* |
Coding | >Hirsu2|6284 ATGACTTTCTACACGCGCTGGGCTACGCTGGTCCTTTCTCTGGCACTCTGCGTGCTACAATGGCCGCACCACAGT TTTGGTCTTGACCCAACGCCCTCCTCATCACCAGACTCTGAGCCACAGCCTTTCGGTATCCCTCCTCCGATCGAA GAGCTCGAAGGTTATCAGTCGATCGACTTCGAGAATGACCTGAGCTCGAAAGATCTGGGATACTCCCCGAAAGAC CACATCCAACTGGCACCGCCTCCAAAAATCGTCTTTCGCAGCGGCAAACTATCTCCAGACGAGATGAGATCTCGA GGTGGAATGTACGAGGGCACGCTCGTGCCTCCGACGAATGCGAACGGCGGATTCAGCATATTTTATCATCATTGT GAGCGACTGACTCACATGACAGACCCGAAAAGAAGCAGGTGTAGCCCTCCGCGTCACCTAGAAAGGACGATACAT CTGTCAGAGTATAGGACCGCTACGGCGTATACCGCAACCTCGAGATCTTTCGGTGTATCGTTATCATTCGCGACT CGTGAGGGTCCAGGCTGGGTCTACATGATCCAGGCTACGCCGAACATGATTGATGTCGACGGAACACTTCGCAAC TACCGGCAATACAGAAATGAACAAGAATTCGTGGCCCTTGGGGGGGTACATTGGGGCCAAGTTCTTCGTTACATC CCTGTCCCCGGCAAGTTGACTGCAGCCGACTTTGGGAAGGAATCCCCTCACGAGGTGACTTACACGGATTTCATC AAAAAGTTTCCCAATCATACTTTGACTGCCAACCCGGACTACGATCCAAGGTTCGACAACCTTACAGCCAGCCCG GGAGAGCCGCAGCTGGCCGGTTGGGCGGACAGGCCGGCAAAGGTCAACAAGCTGGAGCCATGGAGCAGGTATCAG AACAAGACACTGGGAGAATACGCCAGGGACTTTATGGACAGTATGAGCAACGAGGCCAAGGCGGCTTTGGGTTGG AACGGTACTTTTCCACTCGAATTCCGGTCGTACCCGAAACACTGA |
Transcript | >Hirsu2|6284 ATGACTTTCTACACGCGCTGGGCTACGCTGGTCCTTTCTCTGGCACTCTGCGTGCTACAATGGCCGCACCACAGT TTTGGTCTTGACCCAACGCCCTCCTCATCACCAGACTCTGAGCCACAGCCTTTCGGTATCCCTCCTCCGATCGAA GAGCTCGAAGGTTATCAGTCGATCGACTTCGAGAATGACCTGAGCTCGAAAGATCTGGGATACTCCCCGAAAGAC CACATCCAACTGGCACCGCCTCCAAAAATCGTCTTTCGCAGCGGCAAACTATCTCCAGACGAGATGAGATCTCGA GGTGGAATGTACGAGGGCACGCTCGTGCCTCCGACGAATGCGAACGGCGGATTCAGCATATTTTATCATCATTGT GAGCGACTGACTCACATGACAGACCCGAAAAGAAGCAGGTGTAGCCCTCCGCGTCACCTAGAAAGGACGATACAT CTGTCAGAGTATAGGACCGCTACGGCGTATACCGCAACCTCGAGATCTTTCGGTGTATCGTTATCATTCGCGACT CGTGAGGGTCCAGGCTGGGTCTACATGATCCAGGCTACGCCGAACATGATTGATGTCGACGGAACACTTCGCAAC TACCGGCAATACAGAAATGAACAAGAATTCGTGGCCCTTGGGGGGGTACATTGGGGCCAAGTTCTTCGTTACATC CCTGTCCCCGGCAAGTTGACTGCAGCCGACTTTGGGAAGGAATCCCCTCACGAGGTGACTTACACGGATTTCATC AAAAAGTTTCCCAATCATACTTTGACTGCCAACCCGGACTACGATCCAAGGTTCGACAACCTTACAGCCAGCCCG GGAGAGCCGCAGCTGGCCGGTTGGGCGGACAGGCCGGCAAAGGTCAACAAGCTGGAGCCATGGAGCAGGTATCAG AACAAGACACTGGGAGAATACGCCAGGGACTTTATGGACAGTATGAGCAACGAGGCCAAGGCGGCTTTGGGTTGG AACGGTACTTTTCCACTCGAATTCCGGTCGTACCCGAAACACTGA |
Gene | >Hirsu2|6284 ATGACTTTCTACACGCGCTGGGCTACGCTGGTCCTTTCTCTGGCACTCTGCGTGCTACAATGGCCGCACCACAGT TTTGGTCTTGACCCAACGCCCTCCTCATCACCAGACTCTGAGCCACAGCCTTTCGGTATCCCTCCTCCGATCGAA GAGCTCGAAGGTTATCAGTCGATCGACTTCGAGAATGACCTGAGCTCGAAAGATCTGGGATACTCCCCGAAAGAC CACATCCAACTGGCACCGCCTCCAAAAATCGTCTTTCGCAGCGGCAAACTATCTCCAGACGAGATGAGATCTCGA GGTGGAATGTACGAGGGCACGCTCGTGCCTCCGACGAATGCGAACGGCGGATTCAGCATATTTTATCATCATTGT GAGCGACTGACTCACATGACAGACCCGAAAAGAAGCAGGTGTAGCCCTCCGCGTCACCTAGAAAGGACGATACAT CTGTCAGAGTATAGGACCGCTACGGCGTATACCGCAACCTCGAGATCTTTCGGTGTATCGTTATCATTCGCGACT CGTGAGGGTCCAGGCTGGGTCTACATGATCCAGGCTACGCCGAACATGATTGATGTCGACGGAACACTTCGCAAC TACCGGCAATACAGAAATGAACAAGAATTCGTGGCCCTTGGGGGGGTACATTGGGGCCAAGTTCTTCGTTACATC CCTGTCCCCGGCAAGTTGACTGCAGCCGACTTTGGGAAGGAATCCCCTCACGAGGTGACTTACACGGATTTCATC AAAAAGTTTCCCAATCATACTTTGACTGCCAACCCGGACTACGATCCAAGGTTCGACAACCTTACAGCCAGCCCG GGAGAGCCGCAGCTGGCCGGTTGGGCGGACAGGCCGGCAAAGGTCAACAAGCTGGAGCCATGGAGCAGGTATCAG AACAAGACACTGGGAGAATACGCCAGGGACTTTATGGACAGTATGAGCAACGAGGCCAAGGCGGCTTTGGGTTGG AACGGTACTTTTCCACTCGAATTCCGGTCGTACCCGAAACACTGA |