© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6272 |
| Gene name | |
| Location | Contig_32:17069..18142 |
| Strand | + |
| Gene length (bp) | 1073 |
| Transcript length (bp) | 996 |
| Coding sequence length (bp) | 996 |
| Protein length (aa) | 332 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 1.5E-36 | 6 | 249 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.9E-16 | 10 | 163 |
| PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 4.2E-06 | 8 | 116 |
| PF01118 | Semialdhyde_dh | Semialdehyde dehydrogenase, NAD binding domain | 2.4E-04 | 6 | 103 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5ZID0|NMRL1_CHICK | NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 | 2 | 268 | 3.0E-18 |
| sp|Q0VCN1|NMRL1_BOVIN | NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 | 4 | 268 | 9.0E-18 |
| sp|Q8K2T1|NMRL1_MOUSE | NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 | 4 | 268 | 1.0E-14 |
| sp|Q9HBL8|NMRL1_HUMAN | NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 | 4 | 268 | 7.0E-14 |
| sp|Q54LJ8|NMRL1_DICDI | NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 | 3 | 145 | 2.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q5ZID0|NMRL1_CHICK | NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 | 2 | 268 | 3.0E-18 |
| sp|Q0VCN1|NMRL1_BOVIN | NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 | 4 | 268 | 9.0E-18 |
| sp|Q8K2T1|NMRL1_MOUSE | NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 | 4 | 268 | 1.0E-14 |
| sp|Q9HBL8|NMRL1_HUMAN | NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 | 4 | 268 | 7.0E-14 |
| sp|Q54LJ8|NMRL1_DICDI | NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 | 3 | 145 | 2.0E-11 |
| sp|P39315|QOR2_ECOLI | Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB PE=1 SV=1 | 6 | 165 | 4.0E-08 |
| sp|P23762|NMR1_NEUCR | Nitrogen metabolite repression protein nmr OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nmr PE=1 SV=2 | 67 | 265 | 3.0E-07 |
| sp|Q1RIM4|CAPD_RICBR | UDP-glucose 4-epimerase OS=Rickettsia bellii (strain RML369-C) GN=capD PE=3 SV=1 | 4 | 82 | 1.0E-06 |
| sp|Q4UM33|CAPD_RICFE | UDP-glucose 4-epimerase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=capD PE=3 SV=1 | 4 | 82 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
| GO:0006694 | steroid biosynthetic process | Yes |
| GO:0055114 | oxidation-reduction process | Yes |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0005488 | binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0048037 | cofactor binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0050662 | coenzyme binding | No |
| GO:0016229 | steroid dehydrogenase activity | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0003824 | catalytic activity | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6272 MSAKTIAIVGATGNQGKVVIDRLLQNATTKDQLKIRALTRDSKSSKSKTLEARGAGRIGIVDADVNNKASLEAAL AGADYVFANLNSYLDMDGEVQQGKNVVDAAKGNNVKLFIWSTLPSFAAFTKGRYTNVRHAENKIQVQEYLATSGV AWVGASTSFFSDNFLWPNYVSLGEGGSYSVSSGTMEPDVKLPMTWLEKDLGPFVAALIEAHLKGDKSAPQNKAVV VAGFHASLRDVAAELSEQTGRPAKAVAGTDAGSVELAEMFSSYNDFGFYEGEEIPSSFVRENGIEHSTLREFVKG ALVPALESRSHIEGSLSEPKTVSSSTTWQKL* |
| Coding | >Hirsu2|6272 ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCTGCCCATGACCTGGCTCGAAAAGGACCTT GGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTGTG GTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGGCC GTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACGAA GGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGGGA GCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCTCG ACCACTTGGCAAAAGCTATAG |
| Transcript | >Hirsu2|6272 ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCTGCCCATGACCTGGCTCGAAAAGGACCTT GGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTGTG GTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGGCC GTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACGAA GGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGGGA GCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCTCG ACCACTTGGCAAAAGCTATAG |
| Gene | >Hirsu2|6272 ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCGTGAGTCTTGGCTTCATGCTGCCCACGTC TTCTACGTATCCTATTTGGTGCTAACTTTGTTTGTCCTCCTCTGCCAGTGCCCATGACCTGGCTCGAAAAGGACC TTGGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTG TGGTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGG CCGTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACG AAGGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGG GAGCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCT CGACCACTTGGCAAAAGCTATAG |