Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6272
Gene name
LocationContig_32:17069..18142
Strand+
Gene length (bp)1073
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 1.5E-36 6 249
PF13460 NAD_binding_10 NAD(P)H-binding 1.9E-16 10 163
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 4.2E-06 8 116
PF01118 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain 2.4E-04 6 103

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5ZID0|NMRL1_CHICK NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 2 268 3.0E-18
sp|Q0VCN1|NMRL1_BOVIN NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 4 268 9.0E-18
sp|Q8K2T1|NMRL1_MOUSE NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 4 268 1.0E-14
sp|Q9HBL8|NMRL1_HUMAN NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 4 268 7.0E-14
sp|Q54LJ8|NMRL1_DICDI NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 3 145 2.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|Q5ZID0|NMRL1_CHICK NmrA-like family domain-containing protein 1 OS=Gallus gallus GN=NMRAL1 PE=2 SV=1 2 268 3.0E-18
sp|Q0VCN1|NMRL1_BOVIN NmrA-like family domain-containing protein 1 OS=Bos taurus GN=NMRAL1 PE=2 SV=1 4 268 9.0E-18
sp|Q8K2T1|NMRL1_MOUSE NmrA-like family domain-containing protein 1 OS=Mus musculus GN=Nmral1 PE=1 SV=1 4 268 1.0E-14
sp|Q9HBL8|NMRL1_HUMAN NmrA-like family domain-containing protein 1 OS=Homo sapiens GN=NMRAL1 PE=1 SV=1 4 268 7.0E-14
sp|Q54LJ8|NMRL1_DICDI NmrA-like family domain-containing protein DDB_G0286605 OS=Dictyostelium discoideum GN=DDB_G0286605 PE=2 SV=1 3 145 2.0E-11
sp|P39315|QOR2_ECOLI Quinone oxidoreductase 2 OS=Escherichia coli (strain K12) GN=qorB PE=1 SV=1 6 165 4.0E-08
sp|P23762|NMR1_NEUCR Nitrogen metabolite repression protein nmr OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nmr PE=1 SV=2 67 265 3.0E-07
sp|Q1RIM4|CAPD_RICBR UDP-glucose 4-epimerase OS=Rickettsia bellii (strain RML369-C) GN=capD PE=3 SV=1 4 82 1.0E-06
sp|Q4UM33|CAPD_RICFE UDP-glucose 4-epimerase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=capD PE=3 SV=1 4 82 7.0E-06
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GO

GO Term Description Terminal node
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0006694 steroid biosynthetic process Yes
GO:0055114 oxidation-reduction process Yes
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Yes
GO:0051287 NAD binding Yes
GO:0008610 lipid biosynthetic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0005488 binding No
GO:1901265 nucleoside phosphate binding No
GO:0036094 small molecule binding No
GO:0044238 primary metabolic process No
GO:0003674 molecular_function No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0006629 lipid metabolic process No
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors No
GO:0071704 organic substance metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0048037 cofactor binding No
GO:0016491 oxidoreductase activity No
GO:0050662 coenzyme binding No
GO:0016229 steroid dehydrogenase activity No
GO:1901360 organic cyclic compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008202 steroid metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0003824 catalytic activity No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0000166 nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6272
MSAKTIAIVGATGNQGKVVIDRLLQNATTKDQLKIRALTRDSKSSKSKTLEARGAGRIGIVDADVNNKASLEAAL
AGADYVFANLNSYLDMDGEVQQGKNVVDAAKGNNVKLFIWSTLPSFAAFTKGRYTNVRHAENKIQVQEYLATSGV
AWVGASTSFFSDNFLWPNYVSLGEGGSYSVSSGTMEPDVKLPMTWLEKDLGPFVAALIEAHLKGDKSAPQNKAVV
VAGFHASLRDVAAELSEQTGRPAKAVAGTDAGSVELAEMFSSYNDFGFYEGEEIPSSFVRENGIEHSTLREFVKG
ALVPALESRSHIEGSLSEPKTVSSSTTWQKL*
Coding >Hirsu2|6272
ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA
AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT
GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG
GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT
GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA
AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG
GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT
GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCTGCCCATGACCTGGCTCGAAAAGGACCTT
GGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTGTG
GTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGGCC
GTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACGAA
GGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGGGA
GCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCTCG
ACCACTTGGCAAAAGCTATAG
Transcript >Hirsu2|6272
ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA
AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT
GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG
GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT
GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA
AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG
GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT
GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCTGCCCATGACCTGGCTCGAAAAGGACCTT
GGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTGTG
GTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGGCC
GTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACGAA
GGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGGGA
GCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCTCG
ACCACTTGGCAAAAGCTATAG
Gene >Hirsu2|6272
ATGTCGGCCAAAACGATTGCCATCGTCGGTGCCACGGGCAACCAGGGCAAGGTGGTCATCGATCGGCTACTGCAA
AATGCCACCACGAAGGACCAGCTCAAGATCCGTGCCTTGACACGCGACTCCAAGTCGAGCAAGTCCAAGACGCTT
GAAGCTAGGGGGGCAGGTCGTATCGGAATCGTCGATGCTGATGTCAACAACAAGGCCAGCCTGGAAGCGGCTTTG
GCCGGCGCAGACTACGTCTTTGCCAACTTGAACTCGTACCTTGACATGGACGGCGAAGTACAACAGGGGAAGAAT
GTCGTCGACGCAGCAAAGGGGAACAATGTGAAGCTCTTCATCTGGTCCACCTTGCCCTCCTTCGCCGCTTTTACA
AAGGGGAGATACACCAACGTCCGCCACGCCGAAAACAAGATCCAGGTGCAAGAGTACCTGGCCACCTCCGGTGTG
GCCTGGGTCGGCGCATCGACGTCCTTCTTTTCTGATAACTTCCTCTGGCCAAACTACGTATCCCTGGGTGAGGGT
GGGTCGTATAGCGTCTCGTCAGGCACCATGGAGCCCGACGTCAAGCGTGAGTCTTGGCTTCATGCTGCCCACGTC
TTCTACGTATCCTATTTGGTGCTAACTTTGTTTGTCCTCCTCTGCCAGTGCCCATGACCTGGCTCGAAAAGGACC
TTGGTCCTTTTGTCGCTGCCCTCATCGAGGCCCATCTGAAGGGCGACAAGTCTGCGCCCCAGAACAAGGCAGTTG
TGGTAGCTGGTTTCCACGCCAGCCTGCGTGACGTTGCCGCCGAACTCTCGGAACAAACGGGAAGACCGGCCAAGG
CCGTCGCTGGAACAGACGCTGGGTCTGTTGAGTTGGCCGAAATGTTCAGCAGCTACAATGATTTTGGCTTTTACG
AAGGTGAAGAGATACCGAGTAGCTTTGTCCGCGAGAATGGTATTGAGCACTCTACACTCCGAGAATTTGTCAAGG
GAGCTCTAGTCCCTGCCCTTGAGTCTCGAAGCCACATTGAGGGATCTTTGTCTGAGCCGAAGACTGTGAGCTCCT
CGACCACTTGGCAAAAGCTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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