Protein ID | Hirsu2|6270 |
Gene name | |
Location | Contig_32:7527..9255 |
Strand | + |
Gene length (bp) | 1728 |
Transcript length (bp) | 1509 |
Coding sequence length (bp) | 1509 |
Protein length (aa) | 503 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06863 | DUF1254 | Protein of unknown function (DUF1254) | 9.7E-30 | 66 | 203 |
PF06742 | DUF1214 | Protein of unknown function (DUF1214) | 4.0E-24 | 350 | 471 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6270 MAARLFRSALVLGAALGCVTASRPPLSSRPGASRSTEATAFSIIYGYPLTQFALTFDSVLTSTGTNVLISQETTP TSNDTLVVRPNVDTLYSRAVLDLSQVDVAVTVPEVDEGRFYVFAFYDLWSNNFANLGSLNGTKPGRYLARMAPDL AEIGFEPAAANESDYLGYINFPTAYGLVCPRILLENNTTDVDAVHDIQAAIQIDEVPRPVDGTAIPALTFELLGN GTLEALAARQPGSWDDTAVRTLFRVMAGIAPFNMPYDPQQAGLVARSFAEAGIVNGRYFPPSDVDFSQVGKLVNA SLSEVAKQAESLGNHWFDMPAALSGDFSSHYSARCLLGYFEYLLLASYEALYPSYSGHGVPGLYLEPNESYILSF SGKPPVRGFWSLTAYNSANYLVDNPIDRYSLGDRSNITYPDGSPVYGGESSGHSASFSLLLQPGDVTPPDNWTSN WLPAPVGGGNFSVNLRFYGPTKLLAAGGRYEYPTVTKQAAITAKPRPERGEL* |
Coding | >Hirsu2|6270 ATGGCGGCCCGTCTCTTTCGATCGGCCCTGGTTCTCGGCGCGGCCCTCGGCTGCGTGACGGCGTCTCGGCCTCCG CTCTCTTCGCGGCCCGGCGCCAGTCGTTCGACCGAGGCAACGGCCTTCTCCATCATCTACGGCTACCCACTGACC CAGTTCGCCCTGACGTTTGATTCTGTCCTCACCTCCACGGGCACCAACGTGCTGATCAGCCAGGAAACTACACCG ACATCCAACGATACCTTGGTCGTGCGGCCCAACGTCGATACGCTCTATTCGAGAGCCGTTCTCGATCTCTCGCAA GTAGACGTCGCCGTGACCGTGCCGGAGGTGGACGAGGGCCGCTTCTACGTCTTCGCCTTCTATGACTTATGGTCC AACAACTTCGCCAACCTGGGGAGCCTGAACGGCACCAAGCCCGGCCGATACCTGGCCCGGATGGCGCCGGATCTG GCCGAGATCGGGTTCGAGCCGGCGGCGGCCAACGAGTCGGACTATCTCGGCTACATCAACTTCCCGACGGCGTAC GGCCTCGTGTGCCCGCGCATCCTGCTCGAAAACAACACGACGGATGTCGACGCCGTGCACGACATCCAGGCCGCC ATCCAGATCGACGAGGTCCCCCGGCCGGTCGACGGCACGGCCATCCCCGCCCTGACGTTCGAGCTGCTGGGCAAC GGAACGCTGGAGGCGCTGGCGGCGCGCCAGCCCGGGTCCTGGGACGACACCGCGGTCCGGACGCTCTTCCGGGTC ATGGCCGGCATTGCGCCCTTCAACATGCCCTACGATCCGCAGCAGGCCGGCCTCGTCGCCCGGAGCTTCGCCGAG GCCGGCATCGTCAACGGCCGATATTTCCCGCCGTCCGACGTCGACTTTTCTCAGGTCGGCAAGCTCGTGAATGCC AGCCTGTCCGAGGTGGCGAAACAGGCCGAGTCGCTAGGAAACCACTGGTTCGATATGCCGGCCGCGCTGAGCGGA GACTTCAGCAGCCACTATAGCGCCCGCTGCCTCCTTGGCTACTTTGAGTATCTGCTCCTGGCTTCGTACGAGGCC CTGTACCCTTCGTACAGCGGCCACGGGGTCCCGGGGCTCTATCTCGAGCCGAACGAGAGCTACATCCTCAGCTTC TCCGGCAAGCCCCCCGTTCGGGGATTCTGGAGCCTGACCGCGTACAACAGCGCCAACTACCTGGTCGACAACCCC ATCGACCGCTACTCGCTGGGAGATCGGAGCAACATCACCTACCCGGACGGAAGCCCGGTCTACGGAGGCGAGAGC AGCGGCCACAGCGCCTCCTTCTCCCTCCTGCTGCAGCCGGGCGACGTCACGCCGCCGGACAACTGGACGAGCAAC TGGCTGCCGGCGCCGGTGGGCGGAGGCAACTTCAGCGTGAATCTGCGCTTTTACGGTCCGACCAAGCTGCTCGCG GCTGGTGGGAGATATGAGTATCCAACAGTGACCAAGCAAGCTGCCATTACGGCGAAGCCTCGACCTGAAAGGGGT GAGCTGTAG |
Transcript | >Hirsu2|6270 ATGGCGGCCCGTCTCTTTCGATCGGCCCTGGTTCTCGGCGCGGCCCTCGGCTGCGTGACGGCGTCTCGGCCTCCG CTCTCTTCGCGGCCCGGCGCCAGTCGTTCGACCGAGGCAACGGCCTTCTCCATCATCTACGGCTACCCACTGACC CAGTTCGCCCTGACGTTTGATTCTGTCCTCACCTCCACGGGCACCAACGTGCTGATCAGCCAGGAAACTACACCG ACATCCAACGATACCTTGGTCGTGCGGCCCAACGTCGATACGCTCTATTCGAGAGCCGTTCTCGATCTCTCGCAA GTAGACGTCGCCGTGACCGTGCCGGAGGTGGACGAGGGCCGCTTCTACGTCTTCGCCTTCTATGACTTATGGTCC AACAACTTCGCCAACCTGGGGAGCCTGAACGGCACCAAGCCCGGCCGATACCTGGCCCGGATGGCGCCGGATCTG GCCGAGATCGGGTTCGAGCCGGCGGCGGCCAACGAGTCGGACTATCTCGGCTACATCAACTTCCCGACGGCGTAC GGCCTCGTGTGCCCGCGCATCCTGCTCGAAAACAACACGACGGATGTCGACGCCGTGCACGACATCCAGGCCGCC ATCCAGATCGACGAGGTCCCCCGGCCGGTCGACGGCACGGCCATCCCCGCCCTGACGTTCGAGCTGCTGGGCAAC GGAACGCTGGAGGCGCTGGCGGCGCGCCAGCCCGGGTCCTGGGACGACACCGCGGTCCGGACGCTCTTCCGGGTC ATGGCCGGCATTGCGCCCTTCAACATGCCCTACGATCCGCAGCAGGCCGGCCTCGTCGCCCGGAGCTTCGCCGAG GCCGGCATCGTCAACGGCCGATATTTCCCGCCGTCCGACGTCGACTTTTCTCAGGTCGGCAAGCTCGTGAATGCC AGCCTGTCCGAGGTGGCGAAACAGGCCGAGTCGCTAGGAAACCACTGGTTCGATATGCCGGCCGCGCTGAGCGGA GACTTCAGCAGCCACTATAGCGCCCGCTGCCTCCTTGGCTACTTTGAGTATCTGCTCCTGGCTTCGTACGAGGCC CTGTACCCTTCGTACAGCGGCCACGGGGTCCCGGGGCTCTATCTCGAGCCGAACGAGAGCTACATCCTCAGCTTC TCCGGCAAGCCCCCCGTTCGGGGATTCTGGAGCCTGACCGCGTACAACAGCGCCAACTACCTGGTCGACAACCCC ATCGACCGCTACTCGCTGGGAGATCGGAGCAACATCACCTACCCGGACGGAAGCCCGGTCTACGGAGGCGAGAGC AGCGGCCACAGCGCCTCCTTCTCCCTCCTGCTGCAGCCGGGCGACGTCACGCCGCCGGACAACTGGACGAGCAAC TGGCTGCCGGCGCCGGTGGGCGGAGGCAACTTCAGCGTGAATCTGCGCTTTTACGGTCCGACCAAGCTGCTCGCG GCTGGTGGGAGATATGAGTATCCAACAGTGACCAAGCAAGCTGCCATTACGGCGAAGCCTCGACCTGAAAGGGGT GAGCTGTAG |
Gene | >Hirsu2|6270 ATGGCGGCCCGTCTCTTTCGATCGGCCCTGGTTCTCGGCGCGGCCCTCGGCTGCGTGACGGCGTCTCGGCCTCCG CTCTCTTCGCGGCCCGGCGCCAGTCGTTCGACCGAGGCAACGGCCTTCTCCATCATCGTAGGCATAGTCGCATCT CTGAGCTGGCGCGAGCCCGGCGCTGACCGCTGACCGTTCGACCAGTACGGCTACCCACTGACCCAGTTCGCCCTG ACGTTTGATTCTGTCCTCACCTCCACGGGCACCAACGTGCTGATCAGCCAGGAAACTACACCGACATCCAACGAT ACCTTGGTCGTGCGGCCCAACGTCGATACGCTCTATTCGAGAGCCGTTCTCGATCTCTCGCAAGTAGACGTCGCC GTGACCGTGCCGGAGGTGGACGAGGGCCGCTTCTACGTCTTCGCCTTCTATGACTTGTGCGTTCAGCCCCCGACT CACATGCCCTTCCGTCCTGGGAACTCGCTCACCGTGTCCGGCCTGCCTGCAGATGGTCCAACAACTTCGCCAACC TGGGGAGCCTGAACGGCACCAAGCCCGGCCGATACCTGGCCCGGATGGCGCCGGATCTGGCCGAGATCGGGTTCG AGCCGGCGGCGGCCAACGAGTCGGACTATCTCGGCTACATCAACTTCCCGACGGCGTACGGCCTCGTGTGCCCGC GCATCCTGCTCGAAAACAACACGACGGATGTCGACGCCGTGCACGACATCCAGGCCGCCATCCAGATCGACGAGG TCCCCCGGCCGGTCGACGGCACGGCCATCCCCGCCCTGACGTTCGAGCTGCTGGGCAACGGAACGCTGGAGGCGC TGGCGGCGCGCCAGCCCGGGTCCTGGGACGACACCGCGGTCCGGACGCTCTTCCGGGTCATGGCCGGCATTGCGC CCTTCAACATGCCCTACGATCCGCAGCAGGCCGGCCTCGTCGCCCGGAGCTTCGCCGAGGCCGGCATCGTCAACG GCCGATATTTCCCGCCGTCCGACGTCGACTTTTCTCAGGTCGGCAAGCTCGTGAATGCCAGCCTGTCCGAGGTGG CGAAACAGGCCGAGTCGCTAGGAAACCACTGGTTCGATATGCCGGCCGCGCTGAGCGGAGACTTCAGCAGCCACT ATAGCGCCCGCTGCCTCCTTGGCTACTTTGAGTATCTGCTCCTGGCTTCGTACGAGGCCCTGTACCCTTCGTACA GCGGCCACGGGGTCCCGGGGCTCTATCTCGAGCCGAACGAGAGCTACATCCTCAGCTTCTCCGGCAAGCCCCCCG TTCGGGGATTCTGGAGCCTGACCGCGTACAACAGCGCCAACTACCTGGTCGACAACCCCATCGACCGCTACTCGC TGGGAGATCGGAGCAACATCACCTACCCGGACGGAAGCCCGGTCTACGGAGGCGAGAGCAGCGGCCACAGCGCCT CCTTCTCCCTCCTGCTGCAGCCGGGCGACGTCACGCCGCCGGACAACTGGACGAGCAACTGGCTGCCGGCGCCGG TGGGCGGAGGCAACTTCAGCGTGAATCGTGAGTCCAGCCTGGCCCCGGACCCGTGCGCGTCGGCTGTTGATGGAG GCGTGCGCTTCCATGTCGGTTTGCTTACCAGTCGCAGTGCGCTTTTACGGTCCGACCAAGCTGCTCGCGGCTGGT GGGAGATATGAGTATCCAACAGTGACCAAGCAAGCTGCCATTACGGCGAAGCCTCGACCTGAAAGGGGTGAGCTG TAG |