Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6268
Gene name
LocationContig_32:1593..3012
Strand-
Gene length (bp)1419
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 33 52 19
2 67 86 19
3 151 173 22
4 198 220 22
5 233 254 21
6 269 291 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6268
MRDPRIAELEAAGKLPPDLPIAAVEANHDARGYIGISVVMALTCFVVVSRLLARALFVKQFGVDDKITLASLLCF
IPFASLCLHLISIRAARNQVYIEFALNVEEWYSVQAYDTISHLFYGTALVLCRIAGLAFYHRICSQCKRFLRAIK
IVLAVLILGYVVQTGLIVFHCWPLSLLWAFDDRPGTQMPRCLDWMDVYATNSAISLVCDLLLFGIPVAMLRAMDM
SRKKKIQLGCILLPGIAVVAISICRIFMVVWFGYGFDPGDGLRFAFLNLLIVEVAEVGATLIALSAPGIKPLVDR
YILRRANPRDSNQSYESYGDTVEAGSSRAGLASLKRSPSQMSSPGFDGRSLYGTEVSVGARHGNEKKDEIRVTVD
VHVKDEHDRRPWSGAPARAESRYE*
Coding >Hirsu2|6268
ATGCGCGACCCCCGGATCGCCGAGCTCGAGGCGGCGGGCAAGCTCCCTCCCGACCTCCCGATCGCGGCGGTCGAG
GCCAACCACGACGCGCGTGGCTACATCGGCATCTCCGTCGTCATGGCCCTGACGTGCTTCGTCGTCGTCAGCCGG
CTGCTCGCGCGCGCGCTGTTCGTCAAGCAGTTCGGCGTCGACGACAAGATCACGCTGGCGTCCCTGCTGTGCTTC
ATCCCCTTCGCCTCGCTGTGCCTCCACCTCATCTCGATCCGAGCGGCGAGAAACCAGGTGTACATCGAGTTCGCG
CTCAACGTGGAAGAGTGGTACAGCGTCCAGGCCTACGACACCATCTCCCACCTCTTCTACGGCACCGCCCTGGTG
CTGTGCCGCATCGCCGGCCTGGCCTTCTACCACCGCATCTGCAGCCAGTGCAAGAGGTTCCTGCGGGCCATCAAG
ATCGTCTTGGCCGTCCTCATCCTCGGCTACGTCGTCCAGACCGGCCTCATCGTCTTCCACTGCTGGCCGCTGTCC
CTGCTCTGGGCCTTCGACGACCGGCCGGGCACGCAGATGCCGCGCTGCCTGGACTGGATGGACGTGTACGCCACC
AACTCGGCCATCTCGCTCGTCTGCGACCTGCTGCTCTTCGGCATCCCCGTCGCCATGCTGCGGGCCATGGACATG
AGCCGGAAGAAGAAGATACAGTTGGGCTGTATTCTCCTGCCGGGCATCGCTGTCGTCGCCATTTCCATCTGCAGG
ATCTTCATGGTCGTCTGGTTCGGCTACGGATTCGACCCGGGCGACGGCCTCCGCTTCGCCTTTCTCAACCTGCTG
ATCGTCGAGGTGGCCGAGGTCGGGGCGACGCTGATCGCCCTGTCGGCACCGGGCATCAAGCCGCTCGTGGACCGG
TACATCCTGCGCCGGGCGAACCCGCGCGATTCCAACCAGTCGTACGAGAGCTACGGGGACACGGTCGAGGCCGGC
TCTTCGCGGGCCGGGCTGGCCTCGCTCAAGCGGTCGCCGTCCCAGATGAGCTCGCCCGGCTTCGACGGCCGGAGC
CTGTACGGGACCGAGGTGAGCGTCGGCGCCCGCCACGGCAACGAGAAGAAGGACGAGATCCGCGTCACGGTCGAC
GTCCACGTCAAGGACGAGCACGACCGGCGGCCGTGGAGCGGCGCGCCGGCGCGGGCGGAGAGTCGCTACGAATAG
Transcript >Hirsu2|6268
ATGCGCGACCCCCGGATCGCCGAGCTCGAGGCGGCGGGCAAGCTCCCTCCCGACCTCCCGATCGCGGCGGTCGAG
GCCAACCACGACGCGCGTGGCTACATCGGCATCTCCGTCGTCATGGCCCTGACGTGCTTCGTCGTCGTCAGCCGG
CTGCTCGCGCGCGCGCTGTTCGTCAAGCAGTTCGGCGTCGACGACAAGATCACGCTGGCGTCCCTGCTGTGCTTC
ATCCCCTTCGCCTCGCTGTGCCTCCACCTCATCTCGATCCGAGCGGCGAGAAACCAGGTGTACATCGAGTTCGCG
CTCAACGTGGAAGAGTGGTACAGCGTCCAGGCCTACGACACCATCTCCCACCTCTTCTACGGCACCGCCCTGGTG
CTGTGCCGCATCGCCGGCCTGGCCTTCTACCACCGCATCTGCAGCCAGTGCAAGAGGTTCCTGCGGGCCATCAAG
ATCGTCTTGGCCGTCCTCATCCTCGGCTACGTCGTCCAGACCGGCCTCATCGTCTTCCACTGCTGGCCGCTGTCC
CTGCTCTGGGCCTTCGACGACCGGCCGGGCACGCAGATGCCGCGCTGCCTGGACTGGATGGACGTGTACGCCACC
AACTCGGCCATCTCGCTCGTCTGCGACCTGCTGCTCTTCGGCATCCCCGTCGCCATGCTGCGGGCCATGGACATG
AGCCGGAAGAAGAAGATACAGTTGGGCTGTATTCTCCTGCCGGGCATCGCTGTCGTCGCCATTTCCATCTGCAGG
ATCTTCATGGTCGTCTGGTTCGGCTACGGATTCGACCCGGGCGACGGCCTCCGCTTCGCCTTTCTCAACCTGCTG
ATCGTCGAGGTGGCCGAGGTCGGGGCGACGCTGATCGCCCTGTCGGCACCGGGCATCAAGCCGCTCGTGGACCGG
TACATCCTGCGCCGGGCGAACCCGCGCGATTCCAACCAGTCGTACGAGAGCTACGGGGACACGGTCGAGGCCGGC
TCTTCGCGGGCCGGGCTGGCCTCGCTCAAGCGGTCGCCGTCCCAGATGAGCTCGCCCGGCTTCGACGGCCGGAGC
CTGTACGGGACCGAGGTGAGCGTCGGCGCCCGCCACGGCAACGAGAAGAAGGACGAGATCCGCGTCACGGTCGAC
GTCCACGTCAAGGACGAGCACGACCGGCGGCCGTGGAGCGGCGCGCCGGCGCGGGCGGAGAGTCGCTACGAATAG
Gene >Hirsu2|6268
ATGCGCGACCCCCGGATCGCCGAGCTCGAGGCGGCGGGCAAGCTCCCTCCCGACCTCCCGATCGCGGCGGTCGAG
GCCAACCACGACGCGCGTGGCTACATCGGCATCTCCGTCGTCATGGCCCTGACGTGCTTCGTCGTCGTCAGCCGG
CTGCTCGCGCGCGCGCTGTTCGTCAAGCAGTTCGGCGTCGACGACAAGATCACGCTGGCGTCCCTGGTGAGGACA
CGATCAACATGCCGATCGGACCGGAGCGCCCTTGGCTGACCCGGTCCCTCTCTCTTCACCCAGCTGTGCTTCATC
CCCTTCGCCTCGCTGTGCCTCCACCTCATCTCGATCCGAGCGGCGAGAAACCAGGTGTACATCGAGTTCGCGCTC
AACGTGGAAGAGTGGTACAGCGTCCAGGCCTACGACACCATCTCCCACCTCTTCTACGGCACCGCCCTGGTGCTG
TGCCGCATCGCCGGCCTGGCCTTCTACCACCGCATCTGCAGCCAGTGCAAGAGGTTCCTGCGGGCCATCAAGATC
GTCTTGGCCGTCCTCATCCTCGGCTACGTCGTCCAGACCGGCCTCATCGTCTTCCACTGCTGGCCGCTGTCCCTG
CTCTGGGCCTTCGACGACCGGCCGGGCACGCAGATGCCGCGCTGCCTGGACTGGATGGACGTGTACGCCACCAAC
TCGGCCATCTCGCTCGTCTGCGACCTGCTGCTCTTCGGCATCCCCGTCGCCATGCTGCGGGCCATGGACATGAGC
CGGAAGAAGAAGATACAGTTGGGCTGTATTCTCCTGCCGGGCATCGCGTGAGTCAACGACACGAGACGAAGACGA
GGCTGGCCATCATCTTCGTGACTGACCCGGCCCCGAAAATGCAGTGTCGTCGCCATTTCCATCTGCAGGATCTTC
ATGGTCGTCTGGTTCGGCTGTAAGTGACAAGACTCCATGTCCCGACGAAGCGGTCCCGAAGGCCGAGGCTTTGCT
GACGTGCGAGTTCCGGAAGACGGATTCGACCCGGGCGACGGCCTCCGCTTCGCCTTTCTCAACCTGCTGATCGTC
GAGGTGGCCGAGGTCGGGGCGACGCTGATCGCCCTGTCGGCACCGGGCATCAAGCCGCTCGTGGACCGGTACATC
CTGCGCCGGGCGAACCCGCGCGATTCCAACCAGTCGTACGAGAGCTACGGGGACACGGTCGAGGCCGGCTCTTCG
CGGGCCGGGCTGGCCTCGCTCAAGCGGTCGCCGTCCCAGATGAGCTCGCCCGGCTTCGACGGCCGGAGCCTGTAC
GGGACCGAGGTGAGCGTCGGCGCCCGCCACGGCAACGAGAAGAAGGACGAGATCCGCGTCACGGTCGACGTCCAC
GTCAAGGACGAGCACGACCGGCGGCCGTGGAGCGGCGCGCCGGCGCGGGCGGAGAGTCGCTACGAATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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