Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6256
Gene name
LocationContig_319:19600..20218
Strand-
Gene length (bp)618
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide 0.0684 0.0908 0.4153 0.267 0.1387 0.0208 0.6349 0.3175 0.2755 0.0099

SignalP

SignalP signal predicted Location Score
Yes 1 - 21 0.999769

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 133 155 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3365
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7528
Ophiocordyceps australis map64 (Brazil) OphauB2|6968
Ophiocordyceps camponoti-floridani Ophcf2|01105
Ophiocordyceps camponoti-rufipedis Ophun1|259
Ophiocordyceps kimflemingae Ophio5|6844
Ophiocordyceps subramaniannii Hirsu2|6256 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6256
MARSQLLALVLAALMVAIAAASAPTFCKCTCFKNSTIIPLGPASQLKESSSSPSSFLVKRNVHPDSPVPSPSDGF
RPQAAVMGNSYGRRSASTSCSECTKAFCLGQGMDFCKEAKEENVMTHCFQRDSNKDKIIVWAFILGTVALLGWAA
FKRIVEWREGRAMGHQAINYTPVAAAQ*
Coding >Hirsu2|6256
ATGGCGAGGTCGCAGCTGCTGGCGCTCGTGCTTGCAGCGCTCATGGTGGCCATAGCAGCAGCCTCCGCACCGACC
TTTTGCAAATGCACTTGCTTCAAGAACAGCACAATCATCCCTCTCGGTCCGGCCAGCCAGCTCAAAGAGTCGTCC
TCTTCGCCATCGTCATTCCTCGTCAAGCGGAATGTCCATCCCGATTCCCCCGTCCCGAGCCCGTCAGACGGCTTC
CGTCCCCAGGCGGCGGTGATGGGCAACAGCTACGGCCGCCGGTCGGCTTCGACGTCTTGCTCCGAGTGCACCAAG
GCCTTCTGCCTCGGCCAGGGCATGGACTTCTGCAAGGAGGCAAAGGAGGAGAACGTCATGACCCACTGCTTCCAG
CGCGACAGCAACAAGGATAAGATTATTGTTTGGGCCTTCATTCTGGGCACGGTAGCGCTGCTTGGCTGGGCGGCC
TTCAAGCGTATCGTCGAGTGGCGCGAGGGCCGAGCCATGGGTCATCAGGCCATCAACTACACGCCTGTAGCGGCT
GCCCAGTAG
Transcript >Hirsu2|6256
ATGGCGAGGTCGCAGCTGCTGGCGCTCGTGCTTGCAGCGCTCATGGTGGCCATAGCAGCAGCCTCCGCACCGACC
TTTTGCAAATGCACTTGCTTCAAGAACAGCACAATCATCCCTCTCGGTCCGGCCAGCCAGCTCAAAGAGTCGTCC
TCTTCGCCATCGTCATTCCTCGTCAAGCGGAATGTCCATCCCGATTCCCCCGTCCCGAGCCCGTCAGACGGCTTC
CGTCCCCAGGCGGCGGTGATGGGCAACAGCTACGGCCGCCGGTCGGCTTCGACGTCTTGCTCCGAGTGCACCAAG
GCCTTCTGCCTCGGCCAGGGCATGGACTTCTGCAAGGAGGCAAAGGAGGAGAACGTCATGACCCACTGCTTCCAG
CGCGACAGCAACAAGGATAAGATTATTGTTTGGGCCTTCATTCTGGGCACGGTAGCGCTGCTTGGCTGGGCGGCC
TTCAAGCGTATCGTCGAGTGGCGCGAGGGCCGAGCCATGGGTCATCAGGCCATCAACTACACGCCTGTAGCGGCT
GCCCAGTAG
Gene >Hirsu2|6256
ATGGCGAGGTCGCAGCTGCTGGCGCTCGTGCTTGCAGCGCTCATGGTGGCCATAGCAGCAGCCTGTACGTGCCCG
GCTTCCATTTCACTGCTGTCGCGTGCCCATCGAGCTGGGGCGAACGGCTGACTGACCCGAGTTCAACCTGCAGCC
GCACCGACCTTTTGCAAATGCACTTGCTTCAAGAACAGCACAATCATCCCTCTCGGTCCGGCCAGCCAGCTCAAA
GAGTCGTCCTCTTCGCCATCGTCATTCCTCGTCAAGCGGAATGTCCATCCCGATTCCCCCGTCCCGAGCCCGTCA
GACGGCTTCCGTCCCCAGGCGGCGGTGATGGGCAACAGCTACGGCCGCCGGTCGGCTTCGACGTCTTGCTCCGAG
TGCACCAAGGCCTTCTGCCTCGGCCAGGGCATGGACTTCTGCAAGGAGGCAAAGGAGGAGAACGTCATGACCCAC
TGCTTCCAGCGCGACAGCAACAAGGATAAGATTATTGTTTGGGCCTTCATTCTGGGCACGGTAGCGCTGCTTGGC
TGGGCGGCCTTCAAGCGTATCGTCGAGTGGCGCGAGGGCCGAGCCATGGGTCATCAGGCCATCAACTACACGCCT
GTAGCGGCTGCCCAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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