Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6252
Gene name
Location	Contig_319:9333..10289
Strand	+
Gene length (bp)	956
Transcript length (bp)	873
Coding sequence length (bp)	873
Protein length (aa)	291

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14880	COX14	Cytochrome oxidase c assembly	6.1E-16	75	130

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 26	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	87	109	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6252 MASRIGPRSVKDATRFTSTVPHAASKPPSSATPKTRPAASSSPLPAETPEQRVRRLRQAHLAAQRAQISRTDRLV DASRRFLDVAHRWTVGGIVMFTAVAGVVSVYSVWDMLQYNRARRAEWVEAQKKLEADALSAARVAYVKGEATEEQ IALVEEASRAAEETGTKLPPLLSPPEHRTHFEERVKPAFQSEGPSQGKGVLGLFSGLFGGSQSDGGGNETDQAAT PEPRPQSGSTAGGVVQSIGASAKTAWEAEKENQRKGGSLDRLGLDVAAPDQASSGPSGKKRWWPW*
Coding	>Hirsu2\|6252 ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGCCGTTGCC GGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGGTCGAGGCC CAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCGAGGAGCAG ATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGTCCCCGCCC GAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCAAGGGCGTC CTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAGCAGCCACG CCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGAAGACGGCC TGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCGCCCCAGAC CAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA
Transcript	>Hirsu2\|6252 ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGCCGTTGCC GGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGGTCGAGGCC CAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCGAGGAGCAG ATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGTCCCCGCCC GAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCAAGGGCGTC CTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAGCAGCCACG CCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGAAGACGGCC TGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCGCCCCAGAC CAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA
Gene	>Hirsu2\|6252 ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGGTAAAGCA AGCCCGTCGTCTCGCGGCCGCCCGGGCTCTCCTCCCTGCGGCCGGCGCGAAAGGGAGCTAACGGGGGAGAGGTAG CCGTTGCCGGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGG TCGAGGCCCAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCG AGGAGCAGATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGT CCCCGCCCGAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCA AGGGCGTCCTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAG CAGCCACGCCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGA AGACGGCCTGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCG CCCCAGACCAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail