Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6252
Gene name
LocationContig_319:9333..10289
Strand+
Gene length (bp)956
Transcript length (bp)873
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14880 COX14 Cytochrome oxidase c assembly 2.1E-19 75 130

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 87 109 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6252
MASRIGPRSVKDATRFTSTVPHAASKPPSSATPKTRPAASSSPLPAETPEQRVRRLRQAHLAAQRAQISRTDRLV
DASRRFLDVAHRWTVGGIVMFTAVAGVVSVYSVWDMLQYNRARRAEWVEAQKKLEADALSAARVAYVKGEATEEQ
IALVEEASRAAEETGTKLPPLLSPPEHRTHFEERVKPAFQSEGPSQGKGVLGLFSGLFGGSQSDGGGNETDQAAT
PEPRPQSGSTAGGVVQSIGASAKTAWEAEKENQRKGGSLDRLGLDVAAPDQASSGPSGKKRWWPW*
Coding >Hirsu2|6252
ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC
AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG
CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG
GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGCCGTTGCC
GGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGGTCGAGGCC
CAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCGAGGAGCAG
ATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGTCCCCGCCC
GAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCAAGGGCGTC
CTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAGCAGCCACG
CCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGAAGACGGCC
TGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCGCCCCAGAC
CAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA
Transcript >Hirsu2|6252
ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC
AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG
CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG
GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGCCGTTGCC
GGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGGTCGAGGCC
CAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCGAGGAGCAG
ATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGTCCCCGCCC
GAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCAAGGGCGTC
CTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAGCAGCCACG
CCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGAAGACGGCC
TGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCGCCCCAGAC
CAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA
Gene >Hirsu2|6252
ATGGCCTCGAGAATCGGGCCCCGGAGCGTCAAGGACGCCACGCGCTTCACCTCGACGGTCCCCCACGCCGCCTCC
AAGCCGCCCAGCAGCGCGACGCCCAAGACAAGGCCGGCGGCCTCCTCCTCCCCGCTGCCCGCCGAGACGCCAGAG
CAGCGGGTCAGGCGACTGCGGCAGGCACACCTCGCGGCGCAGAGAGCCCAGATCAGCCGGACGGACCGGCTGGTG
GACGCGTCGAGACGGTTTCTGGATGTGGCGCACAGGTGGACCGTCGGCGGCATCGTCATGTTCACAGGTAAAGCA
AGCCCGTCGTCTCGCGGCCGCCCGGGCTCTCCTCCCTGCGGCCGGCGCGAAAGGGAGCTAACGGGGGAGAGGTAG
CCGTTGCCGGCGTCGTCAGCGTATATTCCGTATGGGACATGCTGCAGTACAACCGAGCCCGTCGAGCCGAGTGGG
TCGAGGCCCAGAAGAAGCTCGAGGCCGATGCCCTGTCGGCCGCCCGCGTCGCCTACGTCAAGGGCGAGGCCACCG
AGGAGCAGATCGCGCTGGTCGAGGAGGCCAGCCGCGCGGCCGAGGAGACGGGCACGAAACTACCTCCGCTGCTGT
CCCCGCCCGAGCACCGAACACACTTCGAAGAGCGCGTCAAGCCCGCCTTCCAGAGCGAGGGCCCAAGCCAAGGCA
AGGGCGTCCTCGGCCTCTTTTCAGGCCTTTTCGGTGGGAGTCAGAGCGACGGCGGCGGTAACGAAACCGACCAAG
CAGCCACGCCCGAACCCCGGCCACAGTCGGGCAGCACGGCCGGCGGCGTAGTGCAGTCCATCGGAGCGAGCGCGA
AGACGGCCTGGGAGGCAGAGAAGGAGAACCAGCGCAAGGGCGGCAGTCTGGATCGGCTGGGGCTGGACGTCGCCG
CCCCAGACCAAGCTTCCTCCGGGCCGTCGGGCAAGAAGCGCTGGTGGCCATGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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