© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6227 |
| Gene name | |
| Location | Contig_317:23065..23514 |
| Strand | + |
| Gene length (bp) | 449 |
| Transcript length (bp) | 288 |
| Coding sequence length (bp) | 288 |
| Protein length (aa) | 96 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 1.7E-07 | 20 | 58 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9F131|3HBH1_PSEAC | 3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1 | 17 | 72 | 3.0E-08 |
| sp|Q53552|NHG2_PSEPU | Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1 | 16 | 72 | 1.0E-07 |
| sp|B6D1N4|HPXO_KLEPN | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae GN=hpxO PE=3 SV=1 | 16 | 72 | 2.0E-06 |
| sp|A6T923|HPXO_KLEP7 | FAD-dependent urate hydroxylase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hpxO PE=1 SV=1 | 16 | 72 | 2.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 32 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 34 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6227 MGSRDDTAAAGDPRGLRVAIIGAGMGGLASALALAKKGFRDIDVYESASGLGFVGAGIQLAPNLARILARLGCWD GIAAEATEVLETSIRGTRPE* |
| Coding | >Hirsu2|6227 ATGGGCTCTCGCGATGACACCGCGGCAGCGGGGGACCCGAGGGGGCTGCGCGTCGCCATCATCGGAGCGGGCATG GGCGGCCTCGCGAGCGCGCTGGCACTGGCCAAGAAGGGCTTCCGCGACATCGACGTCTACGAGAGCGCCTCGGGC CTGGGCTTCGTCGGGGCCGGCATCCAGCTGGCGCCCAACCTGGCGCGGATCCTGGCGCGGCTGGGCTGCTGGGAC GGCATCGCGGCGGAGGCGACGGAGGTGCTGGAGACAAGCATCAGGGGTACGAGGCCCGAGTGA |
| Transcript | >Hirsu2|6227 ATGGGCTCTCGCGATGACACCGCGGCAGCGGGGGACCCGAGGGGGCTGCGCGTCGCCATCATCGGAGCGGGCATG GGCGGCCTCGCGAGCGCGCTGGCACTGGCCAAGAAGGGCTTCCGCGACATCGACGTCTACGAGAGCGCCTCGGGC CTGGGCTTCGTCGGGGCCGGCATCCAGCTGGCGCCCAACCTGGCGCGGATCCTGGCGCGGCTGGGCTGCTGGGAC GGCATCGCGGCGGAGGCGACGGAGGTGCTGGAGACAAGCATCAGGGGTACGAGGCCCGAGTGA |
| Gene | >Hirsu2|6227 ATGGGCTCTCGCGATGACACCGCGGCAGCGGGGGACCCGAGGGGGCTGCGCGTCGCCATCATCGGAGCGGGTAAG CGAAGTCCGAGTGAGGGTAGAGGGAGGAGGCGGAGGCGGAGGGCAGCGATATATAGAGAAGAAGAGAGAAGAGAC TTGCCCCCCCCCCCCCCTTTTCCTCCTCCTGTGGAATCCGAAGTGGGCTGGCCGTGGGCTGACGACGAGGCTTGG CGACAGGCATGGGCGGCCTCGCGAGCGCGCTGGCACTGGCCAAGAAGGGCTTCCGCGACATCGACGTCTACGAGA GCGCCTCGGGCCTGGGCTTCGTCGGGGCCGGCATCCAGCTGGCGCCCAACCTGGCGCGGATCCTGGCGCGGCTGG GCTGCTGGGACGGCATCGCGGCGGAGGCGACGGAGGTGCTGGAGACAAGCATCAGGGGTACGAGGCCCGAGTGA |