Protein ID | Hirsu2|6223 |
Gene name | |
Location | Contig_317:10542..11525 |
Strand | + |
Gene length (bp) | 983 |
Transcript length (bp) | 801 |
Coding sequence length (bp) | 801 |
Protein length (aa) | 267 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 8.6E-48 | 38 | 252 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 51 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 31 | 53 | 22 |
2 | 82 | 101 | 19 |
3 | 116 | 138 | 22 |
4 | 213 | 230 | 17 |
5 | 240 | 257 | 17 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6223 MENTSQPDSENGGPLKERQGLVRRVLEDVDITLAYLPLLVCCFVSGLTDGTIYNAYGTFVSMQTGNTIFVALGTS GQNNRPYGWARSLCSIAFFVIGSFAFSRFYQLLGGIRRGSLILSFLSQAIIVILAAAIVQSGVVDGTYPSRRAPS DVDFKELIMIALLSFQAAGQIVSSRSLKVGEVPTVVVTSMLCDLVSDPALFALARNDKRTRRFVAFVLTLVGAIC GGWISKSTSAVHPSLWLVAGIKLALALVWVFWRSKERHGGG* |
Coding | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA |
Transcript | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA |
Gene | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGGTAAATCACACCGGCTCAAGACTCCTCGCTGGCCGTCCAACGGGCCCATTGGCCTCACTCTA ACATATGCTGTCCAATTGCTAGCTTATGGGACATTTGTTTCCATGCAAACAGGTACCTCCTCATCCGCCCTGCGT CCCCGCACGAGGCTTTGCCCCTGGCCGCAAGATCGACGGCATTAGACGTCGAGCTCACATGTACCGTCACGACAG GCAATACCATTTTCGTTGCACTCGGAACTTCGGGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCT CCATCGCCTTCTTTGTCATCGGCTCATTTGCCTTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAA GCCTGATTCTGTCCTTCCTCTCTCAGGCCATAATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCG ACGGCACCTACCCCTCGCGCCGGGCGCCGTCGGACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCT TCCAGGCTGCCGGCCAGATTGTCAGCAGCCGCAGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCA TGCTCTGCGATCTGGTTTCGGATCCGGCCTTGTTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGG CCTTTGTCCTCACCCTCGTCGGCGCCATCTGCGGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGC TCTGGCTTGTGGCCGGTATCAAGCTCGCTCTCGCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGG GAGGTTGA |