Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6223
Gene name
LocationContig_317:10542..11525
Strand+
Gene length (bp)983
Transcript length (bp)801
Coding sequence length (bp)801
Protein length (aa) 267

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 1.6E-47 38 252

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.5

Transmembrane Domains

Domain # Start End Length
1 31 53 22
2 82 101 19
3 116 138 22
4 213 230 17
5 240 257 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6223
MENTSQPDSENGGPLKERQGLVRRVLEDVDITLAYLPLLVCCFVSGLTDGTIYNAYGTFVSMQTGNTIFVALGTS
GQNNRPYGWARSLCSIAFFVIGSFAFSRFYQLLGGIRRGSLILSFLSQAIIVILAAAIVQSGVVDGTYPSRRAPS
DVDFKELIMIALLSFQAAGQIVSSRSLKVGEVPTVVVTSMLCDLVSDPALFALARNDKRTRRFVAFVLTLVGAIC
GGWISKSTSAVHPSLWLVAGIKLALALVWVFWRSKERHGGG*
Coding >Hirsu2|6223
ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG
CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC
ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG
GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC
TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA
ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG
GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC
AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG
TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC
GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC
GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA
Transcript >Hirsu2|6223
ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG
CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC
ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG
GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC
TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA
ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG
GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC
AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG
TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC
GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC
GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA
Gene >Hirsu2|6223
ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG
CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC
ACGATATACAACGGTAAATCACACCGGCTCAAGACTCCTCGCTGGCCGTCCAACGGGCCCATTGGCCTCACTCTA
ACATATGCTGTCCAATTGCTAGCTTATGGGACATTTGTTTCCATGCAAACAGGTACCTCCTCATCCGCCCTGCGT
CCCCGCACGAGGCTTTGCCCCTGGCCGCAAGATCGACGGCATTAGACGTCGAGCTCACATGTACCGTCACGACAG
GCAATACCATTTTCGTTGCACTCGGAACTTCGGGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCT
CCATCGCCTTCTTTGTCATCGGCTCATTTGCCTTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAA
GCCTGATTCTGTCCTTCCTCTCTCAGGCCATAATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCG
ACGGCACCTACCCCTCGCGCCGGGCGCCGTCGGACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCT
TCCAGGCTGCCGGCCAGATTGTCAGCAGCCGCAGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCA
TGCTCTGCGATCTGGTTTCGGATCCGGCCTTGTTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGG
CCTTTGTCCTCACCCTCGTCGGCGCCATCTGCGGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGC
TCTGGCTTGTGGCCGGTATCAAGCTCGCTCTCGCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGG
GAGGTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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