© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6223 |
| Gene name | |
| Location | Contig_317:10542..11525 |
| Strand | + |
| Gene length (bp) | 983 |
| Transcript length (bp) | 801 |
| Coding sequence length (bp) | 801 |
| Protein length (aa) | 267 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 8.6E-48 | 38 | 252 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 31 | 53 | 22 |
| 2 | 82 | 101 | 19 |
| 3 | 116 | 138 | 22 |
| 4 | 213 | 230 | 17 |
| 5 | 240 | 257 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6223 MENTSQPDSENGGPLKERQGLVRRVLEDVDITLAYLPLLVCCFVSGLTDGTIYNAYGTFVSMQTGNTIFVALGTS GQNNRPYGWARSLCSIAFFVIGSFAFSRFYQLLGGIRRGSLILSFLSQAIIVILAAAIVQSGVVDGTYPSRRAPS DVDFKELIMIALLSFQAAGQIVSSRSLKVGEVPTVVVTSMLCDLVSDPALFALARNDKRTRRFVAFVLTLVGAIC GGWISKSTSAVHPSLWLVAGIKLALALVWVFWRSKERHGGG* |
| Coding | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA |
| Transcript | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGCTTATGGGACATTTGTTTCCATGCAAACAGGCAATACCATTTTCGTTGCACTCGGAACTTCG GGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCTCCATCGCCTTCTTTGTCATCGGCTCATTTGCC TTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAAGCCTGATTCTGTCCTTCCTCTCTCAGGCCATA ATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCGACGGCACCTACCCCTCGCGCCGGGCGCCGTCG GACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCTTCCAGGCTGCCGGCCAGATTGTCAGCAGCCGC AGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCATGCTCTGCGATCTGGTTTCGGATCCGGCCTTG TTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGGCCTTTGTCCTCACCCTCGTCGGCGCCATCTGC GGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGCTCTGGCTTGTGGCCGGTATCAAGCTCGCTCTC GCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGGGAGGTTGA |
| Gene | >Hirsu2|6223 ATGGAGAACACATCGCAGCCAGACTCCGAGAATGGCGGCCCGCTCAAGGAGAGGCAGGGTCTCGTGAGGAGGGTG CTCGAGGACGTCGACATCACTCTGGCCTACCTGCCCCTTCTGGTCTGCTGTTTCGTCTCCGGCCTGACCGATGGC ACGATATACAACGGTAAATCACACCGGCTCAAGACTCCTCGCTGGCCGTCCAACGGGCCCATTGGCCTCACTCTA ACATATGCTGTCCAATTGCTAGCTTATGGGACATTTGTTTCCATGCAAACAGGTACCTCCTCATCCGCCCTGCGT CCCCGCACGAGGCTTTGCCCCTGGCCGCAAGATCGACGGCATTAGACGTCGAGCTCACATGTACCGTCACGACAG GCAATACCATTTTCGTTGCACTCGGAACTTCGGGCCAGAACAACCGGCCGTACGGCTGGGCTCGCTCTCTCTGCT CCATCGCCTTCTTTGTCATCGGCTCATTTGCCTTCTCACGCTTCTACCAGCTGCTTGGTGGGATCCGCCGTGGAA GCCTGATTCTGTCCTTCCTCTCTCAGGCCATAATCGTCATCCTGGCCGCCGCTATAGTGCAGAGTGGCGTCGTCG ACGGCACCTACCCCTCGCGCCGGGCGCCGTCGGACGTTGACTTCAAGGAGCTCATCATGATCGCCCTGCTCAGCT TCCAGGCTGCCGGCCAGATTGTCAGCAGCCGCAGCCTCAAGGTGGGCGAGGTGCCCACTGTCGTTGTCACGAGCA TGCTCTGCGATCTGGTTTCGGATCCGGCCTTGTTCGCCCTGGCCAGGAATGATAAGCGTACGCGCCGCTTCGTGG CCTTTGTCCTCACCCTCGTCGGCGCCATCTGCGGCGGCTGGATCTCCAAGTCGACAAGCGCAGTCCACCCCTCGC TCTGGCTTGTGGCCGGTATCAAGCTCGCTCTCGCCCTCGTCTGGGTGTTTTGGAGGTCGAAAGAGAGACATGGGG GAGGTTGA |