Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|62
Gene name
Location	Contig_1006:5401..6256
Strand	-
Gene length (bp)	855
Transcript length (bp)	855
Coding sequence length (bp)	855
Protein length (aa)	285

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	18	40	22
2	47	69	22
3	129	151	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|62 MSNIDMSSFRGIGMVVLQVLRAFTVITLAAVGASCWVLIIKVDKERGYFVFECAVHFFRSLLCLALIVSEFPVLE SVKGYFRRNWPVVSDQRGLSWLGVAMLALGCDMLGNLNRPAYDADKLGPHFSRLTLASSVLAITFGTVNIVCSLV WRDRGEGITCRDIRDNGSLADARRQSLPDYSSATYSNNPSSAATATTEKMRSRFASVFWKKAGGDKEKMKHNISG PFPVRQQDVERQATPPCDNDRLSPIVPGLKRPDTALHPMNTNTNGGRSSVYSEAHMSRF*
Coding	>Hirsu2\|62 ATGTCCAACATCGACATGAGCTCCTTTCGGGGCATCGGCATGGTGGTCCTCCAGGTCCTCCGAGCCTTCACCGTC ATCACGCTGGCCGCCGTCGGTGCCTCGTGCTGGGTCCTGATCATCAAGGTCGACAAGGAGCGCGGCTACTTCGTC TTCGAATGCGCCGTCCACTTCTTCCGATCGCTGCTGTGCCTCGCCCTCATCGTCTCCGAGTTCCCCGTGCTCGAG TCCGTCAAAGGCTACTTCCGCCGCAACTGGCCCGTCGTCTCGGACCAGCGCGGCCTCAGCTGGCTCGGCGTCGCC ATGCTGGCCCTCGGCTGCGACATGCTCGGCAACCTGAACCGCCCCGCCTACGACGCCGACAAGCTCGGCCCGCAC TTCTCCCGCCTCACGCTGGCCTCGTCCGTCCTGGCCATCACCTTCGGCACCGTCAACATCGTCTGCTCCCTCGTC TGGCGCGACCGCGGCGAGGGCATCACCTGCCGCGACATCCGCGACAACGGCTCGCTCGCCGACGCCCGCCGCCAG TCGCTGCCCGACTACTCCTCCGCCACCTACTCCAACAACCCGTCGTCGGCGGCGACGGCGACGACCGAGAAGATG CGGAGCCGGTTCGCCTCCGTGTTCTGGAAGAAGGCCGGCGGCGACAAGGAGAAGATGAAGCACAACATCAGCGGG CCCTTCCCCGTCCGCCAGCAGGACGTCGAGCGCCAGGCCACGCCGCCCTGCGACAACGACCGGCTGAGCCCCATC GTCCCGGGGCTCAAGCGGCCGGACACGGCCCTGCACCCCATGAACACGAACACGAACGGGGGCCGGAGCAGCGTC TACTCGGAGGCGCACATGTCTCGATTCTAA
Transcript	>Hirsu2\|62 ATGTCCAACATCGACATGAGCTCCTTTCGGGGCATCGGCATGGTGGTCCTCCAGGTCCTCCGAGCCTTCACCGTC ATCACGCTGGCCGCCGTCGGTGCCTCGTGCTGGGTCCTGATCATCAAGGTCGACAAGGAGCGCGGCTACTTCGTC TTCGAATGCGCCGTCCACTTCTTCCGATCGCTGCTGTGCCTCGCCCTCATCGTCTCCGAGTTCCCCGTGCTCGAG TCCGTCAAAGGCTACTTCCGCCGCAACTGGCCCGTCGTCTCGGACCAGCGCGGCCTCAGCTGGCTCGGCGTCGCC ATGCTGGCCCTCGGCTGCGACATGCTCGGCAACCTGAACCGCCCCGCCTACGACGCCGACAAGCTCGGCCCGCAC TTCTCCCGCCTCACGCTGGCCTCGTCCGTCCTGGCCATCACCTTCGGCACCGTCAACATCGTCTGCTCCCTCGTC TGGCGCGACCGCGGCGAGGGCATCACCTGCCGCGACATCCGCGACAACGGCTCGCTCGCCGACGCCCGCCGCCAG TCGCTGCCCGACTACTCCTCCGCCACCTACTCCAACAACCCGTCGTCGGCGGCGACGGCGACGACCGAGAAGATG CGGAGCCGGTTCGCCTCCGTGTTCTGGAAGAAGGCCGGCGGCGACAAGGAGAAGATGAAGCACAACATCAGCGGG CCCTTCCCCGTCCGCCAGCAGGACGTCGAGCGCCAGGCCACGCCGCCCTGCGACAACGACCGGCTGAGCCCCATC GTCCCGGGGCTCAAGCGGCCGGACACGGCCCTGCACCCCATGAACACGAACACGAACGGGGGCCGGAGCAGCGTC TACTCGGAGGCGCACATGTCTCGATTCTAA
Gene	>Hirsu2\|62 ATGTCCAACATCGACATGAGCTCCTTTCGGGGCATCGGCATGGTGGTCCTCCAGGTCCTCCGAGCCTTCACCGTC ATCACGCTGGCCGCCGTCGGTGCCTCGTGCTGGGTCCTGATCATCAAGGTCGACAAGGAGCGCGGCTACTTCGTC TTCGAATGCGCCGTCCACTTCTTCCGATCGCTGCTGTGCCTCGCCCTCATCGTCTCCGAGTTCCCCGTGCTCGAG TCCGTCAAAGGCTACTTCCGCCGCAACTGGCCCGTCGTCTCGGACCAGCGCGGCCTCAGCTGGCTCGGCGTCGCC ATGCTGGCCCTCGGCTGCGACATGCTCGGCAACCTGAACCGCCCCGCCTACGACGCCGACAAGCTCGGCCCGCAC TTCTCCCGCCTCACGCTGGCCTCGTCCGTCCTGGCCATCACCTTCGGCACCGTCAACATCGTCTGCTCCCTCGTC TGGCGCGACCGCGGCGAGGGCATCACCTGCCGCGACATCCGCGACAACGGCTCGCTCGCCGACGCCCGCCGCCAG TCGCTGCCCGACTACTCCTCCGCCACCTACTCCAACAACCCGTCGTCGGCGGCGACGGCGACGACCGAGAAGATG CGGAGCCGGTTCGCCTCCGTGTTCTGGAAGAAGGCCGGCGGCGACAAGGAGAAGATGAAGCACAACATCAGCGGG CCCTTCCCCGTCCGCCAGCAGGACGTCGAGCGCCAGGCCACGCCGCCCTGCGACAACGACCGGCTGAGCCCCATC GTCCCGGGGCTCAAGCGGCCGGACACGGCCCTGCACCCCATGAACACGAACACGAACGGGGGCCGGAGCAGCGTC TACTCGGAGGCGCACATGTCTCGATTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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