© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6186 |
| Gene name | |
| Location | Contig_314:21739..22876 |
| Strand | + |
| Gene length (bp) | 1137 |
| Transcript length (bp) | 978 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 47 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 174 | 196 | 22 |
| 2 | 209 | 231 | 22 |
| 3 | 243 | 265 | 22 |
| 4 | 275 | 297 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6186 MADSDQTGALRRPLLGAAPSSSRTFASQSVPRAAALPSTPAAAAWGGGIMSPEARLRSAPTSPPDDFWRLLPVAE SSRRNSAAAAEGPRAPDRKTPSWAASTPSPTETVKRSPLTPFPSWEMESGGRGTRVTERQPQQAREAQQHREPDA AHFLLPIGGGFLERRANLNTVMHGVALVGQAIVALAVSGALLAMTVWEKGGSQSYFWKVLWTYVQPCVGLVFAAC AAALVLHETRVLSAVAMLYVEAAILTMTMATSLALGLCVATHNSSQGVKGVVAACVTLMMGTAVLAFFRVVLVWW LVEDGDELGGQTSDGGGERHASNEH* |
| Coding | >Hirsu2|6186 ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGCGGCCCCGTCGTCGTCGAGGACCTTC GCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGCGGCGGCATCATG TCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTCCCCGTGGCCGAG AGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCGAGCTGGGCCGCG TCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAGATGGAGTCTGGC GGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGGGAGCCGGACGCG GCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTCATGCACGGCGTC GCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTCTGGGAAAAGGGC GGCTCGCAGTCCTACTTTTGGAAAGTGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTCGCCGCGTGC GCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCCGCGATTCTC ACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGGGTCAAGGGC GTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTGGTCTGGTGG CTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGCAACGAGCAC TAG |
| Transcript | >Hirsu2|6186 ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGCGGCCCCGTCGTCGTCGAGGACCTTC GCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGCGGCGGCATCATG TCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTCCCCGTGGCCGAG AGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCGAGCTGGGCCGCG TCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAGATGGAGTCTGGC GGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGGGAGCCGGACGCG GCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTCATGCACGGCGTC GCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTCTGGGAAAAGGGC GGCTCGCAGTCCTACTTTTGGAAAGTGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTCGCCGCGTGC GCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCCGCGATTCTC ACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGGGTCAAGGGC GTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTGGTCTGGTGG CTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGCAACGAGCAC TAG |
| Gene | >Hirsu2|6186 ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGGTAGGACGACGCCGAGCACGCCTCGT AGACCAGCCCATCTCGCACCCCGGGGATCTCAGTCGTTGACAAGCTCGCCCACGCGCCCAGCGGCCCCGTCGTCG TCGAGGACCTTCGCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGC GGCGGCATCATGTCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTC CCCGTGGCCGAGAGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCG AGCTGGGCCGCGTCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAG ATGGAGTCTGGCGGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGG GAGCCGGACGCGGCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTC ATGCACGGCGTCGCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTC TGGGAAAAGGGCGGCTCGCAGTCCTACTTTTGGAAAGTGTACGGCGAACACCGCACCGCGTGGGGAGAGAGCAGC CGGGCATTCTGAATCCTGACACCCTCTCGTTACAGGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTC GCCGCGTGCGCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCC GCGATTCTCACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGG GTCAAGGGCGTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTG GTCTGGTGGCTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGC AACGAGCACTAG |