Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6186
Gene name
LocationContig_314:21739..22876
Strand+
Gene length (bp)1137
Transcript length (bp)978
Coding sequence length (bp)978
Protein length (aa) 326

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

Domain # Start End Length
1 174 196 22
2 209 231 22
3 243 265 22
4 275 297 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6186
MADSDQTGALRRPLLGAAPSSSRTFASQSVPRAAALPSTPAAAAWGGGIMSPEARLRSAPTSPPDDFWRLLPVAE
SSRRNSAAAAEGPRAPDRKTPSWAASTPSPTETVKRSPLTPFPSWEMESGGRGTRVTERQPQQAREAQQHREPDA
AHFLLPIGGGFLERRANLNTVMHGVALVGQAIVALAVSGALLAMTVWEKGGSQSYFWKVLWTYVQPCVGLVFAAC
AAALVLHETRVLSAVAMLYVEAAILTMTMATSLALGLCVATHNSSQGVKGVVAACVTLMMGTAVLAFFRVVLVWW
LVEDGDELGGQTSDGGGERHASNEH*
Coding >Hirsu2|6186
ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGCGGCCCCGTCGTCGTCGAGGACCTTC
GCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGCGGCGGCATCATG
TCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTCCCCGTGGCCGAG
AGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCGAGCTGGGCCGCG
TCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAGATGGAGTCTGGC
GGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGGGAGCCGGACGCG
GCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTCATGCACGGCGTC
GCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTCTGGGAAAAGGGC
GGCTCGCAGTCCTACTTTTGGAAAGTGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTCGCCGCGTGC
GCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCCGCGATTCTC
ACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGGGTCAAGGGC
GTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTGGTCTGGTGG
CTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGCAACGAGCAC
TAG
Transcript >Hirsu2|6186
ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGCGGCCCCGTCGTCGTCGAGGACCTTC
GCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGCGGCGGCATCATG
TCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTCCCCGTGGCCGAG
AGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCGAGCTGGGCCGCG
TCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAGATGGAGTCTGGC
GGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGGGAGCCGGACGCG
GCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTCATGCACGGCGTC
GCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTCTGGGAAAAGGGC
GGCTCGCAGTCCTACTTTTGGAAAGTGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTCGCCGCGTGC
GCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCCGCGATTCTC
ACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGGGTCAAGGGC
GTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTGGTCTGGTGG
CTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGCAACGAGCAC
TAG
Gene >Hirsu2|6186
ATGGCCGACAGCGACCAGACGGGCGCGCTGCGCCGCCCTCTGCTAGGTGGTAGGACGACGCCGAGCACGCCTCGT
AGACCAGCCCATCTCGCACCCCGGGGATCTCAGTCGTTGACAAGCTCGCCCACGCGCCCAGCGGCCCCGTCGTCG
TCGAGGACCTTCGCATCGCAGTCCGTCCCGCGGGCCGCCGCGTTGCCGTCCACGCCGGCGGCGGCGGCATGGGGC
GGCGGCATCATGTCGCCCGAGGCCCGCCTCCGATCCGCGCCCACGTCGCCGCCCGACGACTTCTGGCGCCTGCTC
CCCGTGGCCGAGAGCTCCCGGCGCAACTCGGCCGCCGCCGCGGAGGGGCCGCGCGCCCCGGACAGGAAGACGCCG
AGCTGGGCCGCGTCGACGCCGTCGCCTACGGAGACGGTTAAGAGGTCGCCGCTGACGCCCTTCCCGTCCTGGGAG
ATGGAGTCTGGCGGGAGGGGGACGCGTGTGACGGAACGGCAGCCACAGCAGGCCAGGGAGGCACAGCAGCATCGG
GAGCCGGACGCGGCGCACTTTCTCCTCCCCATCGGAGGCGGATTCCTCGAGCGCCGAGCGAACCTCAACACGGTC
ATGCACGGCGTCGCTCTGGTCGGGCAGGCCATCGTCGCCCTGGCCGTGTCGGGCGCGCTCTTGGCGATGACCGTC
TGGGAAAAGGGCGGCTCGCAGTCCTACTTTTGGAAAGTGTACGGCGAACACCGCACCGCGTGGGGAGAGAGCAGC
CGGGCATTCTGAATCCTGACACCCTCTCGTTACAGGCTCTGGACCTACGTCCAGCCGTGCGTCGGCCTCGTCTTC
GCCGCGTGCGCCGCCGCGCTCGTCCTCCACGAGACGCGCGTCCTCTCGGCCGTCGCGATGCTCTACGTCGAGGCC
GCGATTCTCACGATGACGATGGCGACGTCGCTCGCCCTAGGACTCTGCGTCGCCACCCACAACTCGAGCCAGGGG
GTCAAGGGCGTCGTCGCCGCCTGCGTGACGCTGATGATGGGCACGGCCGTCTTGGCCTTCTTCCGGGTCGTGCTG
GTCTGGTGGCTGGTCGAGGACGGCGACGAGCTCGGCGGCCAGACGAGCGATGGCGGCGGCGAGCGTCACGCGAGC
AACGAGCACTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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