© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6179 |
| Gene name | |
| Location | Contig_314:965..2657 |
| Strand | + |
| Gene length (bp) | 1692 |
| Transcript length (bp) | 1056 |
| Coding sequence length (bp) | 1056 |
| Protein length (aa) | 352 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 7.0E-19 | 99 | 216 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.8E-12 | 120 | 208 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.1E-11 | 121 | 211 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 4.2E-08 | 121 | 210 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 107 | 269 | 3.0E-07 |
| sp|Q9RX93|TAM_DEIRA | Trans-aconitate 2-methyltransferase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=tam PE=3 SV=1 | 119 | 214 | 3.0E-07 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 107 | 269 | 5.0E-07 |
| sp|C5CSI6|TAM_VARPS | Trans-aconitate 2-methyltransferase OS=Variovorax paradoxus (strain S110) GN=tam PE=3 SV=1 | 115 | 214 | 1.0E-06 |
| sp|Q9C6B9|PEAM3_ARATH | Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 | 102 | 269 | 1.0E-06 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 107 | 269 | 3.0E-07 |
| sp|Q9RX93|TAM_DEIRA | Trans-aconitate 2-methyltransferase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=tam PE=3 SV=1 | 119 | 214 | 3.0E-07 |
| sp|Q944H0|PEAM2_ARATH | Phosphomethylethanolamine N-methyltransferase OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=2 | 107 | 269 | 5.0E-07 |
| sp|C5CSI6|TAM_VARPS | Trans-aconitate 2-methyltransferase OS=Variovorax paradoxus (strain S110) GN=tam PE=3 SV=1 | 115 | 214 | 1.0E-06 |
| sp|Q9C6B9|PEAM3_ARATH | Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2 | 102 | 269 | 1.0E-06 |
| sp|Q98K73|TAM_RHILO | Trans-aconitate 2-methyltransferase OS=Rhizobium loti (strain MAFF303099) GN=tam PE=3 SV=1 | 117 | 250 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.694 | 0.3574 | 0.0351 | 0.1852 | 0.1757 | 0.0288 | 0.3298 | 0.1594 | 0.318 | 0.0041 |
| Orthofinder run ID | 4 |
| Orthogroup | 5453 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6179 MPSPSCPRLAAGDAACDAAAAAAGLSASHEPASDSAVEDDDDEADELESNASSLTSITSSVLYGVVAEGQRTYAV YGKEEYGFPMDDREMDRMDLCHSMYYALLDKKRFLAPIDPQPHRILDLGCGTGIWAVDVADEHPSAEVVGVDIAP TQPDWVPPNCSFELDDVEQPWTWKEGAADFIFGRDLFLSIRDFPKLIDQCYRHLKPGGWLEFQCVTGIVQCDDGT VPPDSAYQSMSDNVGAACRAFGTPVDDPLRWKNLLSDRGFEAVVQKVYKLPCSPWAVDKRLKLVGMWEQHHLLNN VDGMIMRLFHKGLGWTEQEILVFGALFRKDLKNLAMHAYFPYYVVYGRKPL* |
| Coding | >Hirsu2|6179 ATGCCGAGCCCGTCTTGCCCTCGTCTTGCTGCCGGCGACGCTGCCTGCGACGCTGCCGCTGCCGCTGCCGGGCTC TCGGCCTCGCACGAGCCAGCCTCGGACTCAGCCGTGGAGGACGACGACGATGAGGCCGACGAGCTCGAAAGCAAT GCCAGCTCGCTCACGTCCATCACGTCGTCTGTCCTGTACGGCGTCGTGGCCGAGGGCCAGCGAACGTATGCCGTC TACGGCAAAGAGGAATACGGCTTCCCCATGGACGATCGGGAGATGGATCGGATGGACCTCTGCCACTCGATGTAC TACGCGCTTCTCGACAAGAAGCGCTTCCTGGCCCCGATCGACCCGCAGCCTCACAGGATCCTGGACCTAGGATGC GGGACAGGCATCTGGGCCGTCGACGTGGCCGACGAGCATCCCAGCGCAGAGGTCGTGGGCGTCGACATAGCTCCG ACACAGCCTGACTGGGTGCCTCCGAACTGCTCCTTCGAGCTCGACGACGTCGAACAGCCGTGGACGTGGAAGGAG GGCGCGGCAGACTTCATCTTCGGCCGCGACCTCTTCCTCTCCATCCGCGACTTTCCGAAGCTCATCGACCAGTGC TACAGGCACCTGAAGCCCGGCGGATGGCTGGAGTTCCAGTGCGTCACGGGCATCGTCCAGTGCGACGACGGCACG GTGCCTCCGGACAGCGCCTACCAGAGCATGTCGGATAACGTGGGCGCGGCCTGCAGAGCGTTCGGGACGCCCGTG GACGACCCCCTGCGCTGGAAGAACTTGCTATCGGACCGGGGCTTCGAGGCGGTAGTCCAAAAGGTGTACAAGCTG CCCTGCTCTCCCTGGGCCGTCGATAAGCGCCTGAAGCTGGTGGGCATGTGGGAGCAGCACCACCTCCTCAACAAC GTCGACGGCATGATTATGAGGCTCTTCCACAAGGGCCTGGGCTGGACGGAACAGGAGATTCTCGTCTTCGGGGCC TTGTTCCGAAAGGACTTGAAGAACCTGGCCATGCATGCCTACTTTCCATATTACGTCGTCTACGGACGCAAACCG CTCTAG |
| Transcript | >Hirsu2|6179 ATGCCGAGCCCGTCTTGCCCTCGTCTTGCTGCCGGCGACGCTGCCTGCGACGCTGCCGCTGCCGCTGCCGGGCTC TCGGCCTCGCACGAGCCAGCCTCGGACTCAGCCGTGGAGGACGACGACGATGAGGCCGACGAGCTCGAAAGCAAT GCCAGCTCGCTCACGTCCATCACGTCGTCTGTCCTGTACGGCGTCGTGGCCGAGGGCCAGCGAACGTATGCCGTC TACGGCAAAGAGGAATACGGCTTCCCCATGGACGATCGGGAGATGGATCGGATGGACCTCTGCCACTCGATGTAC TACGCGCTTCTCGACAAGAAGCGCTTCCTGGCCCCGATCGACCCGCAGCCTCACAGGATCCTGGACCTAGGATGC GGGACAGGCATCTGGGCCGTCGACGTGGCCGACGAGCATCCCAGCGCAGAGGTCGTGGGCGTCGACATAGCTCCG ACACAGCCTGACTGGGTGCCTCCGAACTGCTCCTTCGAGCTCGACGACGTCGAACAGCCGTGGACGTGGAAGGAG GGCGCGGCAGACTTCATCTTCGGCCGCGACCTCTTCCTCTCCATCCGCGACTTTCCGAAGCTCATCGACCAGTGC TACAGGCACCTGAAGCCCGGCGGATGGCTGGAGTTCCAGTGCGTCACGGGCATCGTCCAGTGCGACGACGGCACG GTGCCTCCGGACAGCGCCTACCAGAGCATGTCGGATAACGTGGGCGCGGCCTGCAGAGCGTTCGGGACGCCCGTG GACGACCCCCTGCGCTGGAAGAACTTGCTATCGGACCGGGGCTTCGAGGCGGTAGTCCAAAAGGTGTACAAGCTG CCCTGCTCTCCCTGGGCCGTCGATAAGCGCCTGAAGCTGGTGGGCATGTGGGAGCAGCACCACCTCCTCAACAAC GTCGACGGCATGATTATGAGGCTCTTCCACAAGGGCCTGGGCTGGACGGAACAGGAGATTCTCGTCTTCGGGGCC TTGTTCCGAAAGGACTTGAAGAACCTGGCCATGCATGCCTACTTTCCATATTACGTCGTCTACGGACGCAAACCG CTCTAG |
| Gene | >Hirsu2|6179 ATGCCGAGCCCGTCTTGCCCTCGTCTTGCTGCCGGCGACGCTGCCTGCGACGCTGCCGCTGCCGCTGCCGGGCTC TCGGCCTCGCACGAGCCAGCCTCGGACTCAGCCGTGGAGGTGAGTTTGGACGGAGGAAAAGGCCGAACGCTACCA CTACGCACCCACCCTCTCGGATGGCTGACAGCCGGCCAGGACGACGACGATGAGGTTCGTGCTTCAGTGCATACG CTTGCTTTGACCCTCTGGCAGCCTCTCGAGTCTGTGTGGCGGCTGAGTCCAATCAGGCCGACGAGCTCGAAAGCA ATGCCAGCTCGCTCACGTCCATCACGTCGTCTGTCCTGTACGGCGTCGTGGCCGAGGGCCAGCGAACGTATGCCG TCTACGGCAAAGAGGGTGAGCCGCCTCGCGAGCCCATGTGTATCAGGAGGCGGCTGAGCGACGTGTCTGCCGGCA GAATACGGCTTCCCCATGGACGATCGGGAGATGGATCGGATGGACCTCTGCCACTCGATGTACTACGCGCTTCTC GACAAGAAGCGCTTCCTGGCCCCGATCGACCCGCAGCCTCACAGGATCCTGGACCTAGGATGCGGGACAGGTGAC CGGCGACTGTTCTCTCGGGCGCGCAGAGGCTGACAGGTCGGCCAGGCATCTGGGCCGTCGACGTGGCCGACGAGC ATCCCAGCGCAGAGGTAGGAACAACCTGCTTTCGCGCCACCGGGCCTCGGCAGAGCACTCATCGCCGGCACAGGT CGTGGGCGTCGACATAGCTCCGACACAGCCTGACTGGTCAGTGAGGAACGCCCGGCAGTTGCGCCGAGCACCCGT CCCCGATCCCCAACCGCTCATACGAAGCTTCGCAGGGTGCCTCCGAACTGCTCCTTCGAGCTCGACGACGTCGAA CAGCCGTGGACGTGGAAGGAGGGCGCGGCAGACTTCATCTTCGGCCGCGACCTCTTCCTCTCCATCCGCGACTTT CCGAAGCTCATCGACCAGTGCTACAGGTGCGGGCAGCCGTCCCCCTCCCCGTCCGTACCGTGCCTGTCCCGGGAA CGGCTCGCTTACGCCGTCAACGTTCAGGCACCTGAAGCCCGGCGGATGGCTGGAGTTCCAGTGCGTCACGGGCAT CGTCCAGTGCGACGACGGCACGGTGCCTCCGGACAGCGCCTACCAGAGCATGTCGGATAACGTGGGCGCGGCCTG CAGAGCGTTCGGGACGCCCGTGGACGACCCCCTGCGCTGGAAGAACTTGCTATCGGACCGGGGCTTCGAGGCGGT AGTCCAAAAGGTGTACAAGCTGCCCTGCTCTCCCTGGGCCGTCGATAAGCGCCTGAAGCTGGTGGGCATGTGGGA GCAGCACCACCTCCTCAACAACGTCGACGGCATGATTATGAGGCTCTTCCACAAGGGCCTGGGCTGGACGGAACA GGAGATTCTCGTCTTCGGGGCCTTGTTCCGAAAGGACTTGAAGAACCTGGCCATGCATGCCTACTTTCCATAGTG AGTGGCCCCCGCATGTCCAGCACGGCGGTTGATCCCGCTCGCGGCGGGGCGGCCTGCAGCACGAACAAGTCCCTG CCTCGACGAGTTCGGAGCCGGAGACCGGGGCTCTTCGGCATGAATCATGCGGACTGACCACGGCGTCAATTTCGG GGACGGGATAGTTACGTCGTCTACGGACGCAAACCGCTCTAG |