© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6173 |
| Gene name | |
| Location | Contig_3134:228..989 |
| Strand | - |
| Gene length (bp) | 761 |
| Transcript length (bp) | 594 |
| Coding sequence length (bp) | 594 |
| Protein length (aa) | 198 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04603 | Mog1 | Ran-interacting Mog1 protein | 1.3E-39 | 7 | 150 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54ML6|MOG1_DICDI | Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum GN=mog1 PE=3 SV=1 | 3 | 148 | 7.0E-17 |
| sp|O75002|MOG1_SCHPO | Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mog1 PE=3 SV=1 | 9 | 150 | 5.0E-10 |
| sp|P47123|MOG1_YEAST | Nuclear import protein MOG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOG1 PE=1 SV=1 | 9 | 155 | 8.0E-10 |
| sp|Q32PE2|MOG1_BOVIN | Ran guanine nucleotide release factor OS=Bos taurus GN=RANGRF PE=2 SV=1 | 1 | 150 | 2.0E-08 |
| sp|Q9HD47|MOG1_HUMAN | Ran guanine nucleotide release factor OS=Homo sapiens GN=RANGRF PE=1 SV=1 | 8 | 150 | 3.0E-07 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q54ML6|MOG1_DICDI | Probable ran guanine nucleotide release factor OS=Dictyostelium discoideum GN=mog1 PE=3 SV=1 | 3 | 148 | 7.0E-17 |
| sp|O75002|MOG1_SCHPO | Nuclear import protein mog1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mog1 PE=3 SV=1 | 9 | 150 | 5.0E-10 |
| sp|P47123|MOG1_YEAST | Nuclear import protein MOG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOG1 PE=1 SV=1 | 9 | 155 | 8.0E-10 |
| sp|Q32PE2|MOG1_BOVIN | Ran guanine nucleotide release factor OS=Bos taurus GN=RANGRF PE=2 SV=1 | 1 | 150 | 2.0E-08 |
| sp|Q9HD47|MOG1_HUMAN | Ran guanine nucleotide release factor OS=Homo sapiens GN=RANGRF PE=1 SV=1 | 8 | 150 | 3.0E-07 |
| sp|Q9JIB0|MOG1_MOUSE | Ran guanine nucleotide release factor OS=Mus musculus GN=Rangrf PE=1 SV=1 | 1 | 150 | 5.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6173 MSSYSATPLYGGAIVCDLPDNFADVSKLRQVPDNQEVWIDKNGFTSIIFDITERVGGPGCGPEIDGRAMTTHLED MIGTESEKVRIWNTAETKFTRLESKLPAYTLIATQTPKVGRPREQASAPDFTAIIMTLVRLERCKTDVLITINVP HIKGEYDEEDVDLELGKQGKHIGDAVMYADRIWKTLKIKDCSLFGEP* |
| Coding | >Hirsu2|6173 ATGTCTTCCTATAGTGCCACGCCACTCTACGGTGGCGCTATAGTCTGCGACCTCCCGGACAATTTCGCCGATGTA AGCAAACTCCGGCAAGTACCCGATAATCAGGAAGTATGGATCGACAAGAACGGCTTTACCAGCATCATTTTTGAT ATCACTGAGCGGGTCGGCGGACCCGGCTGCGGCCCCGAGATCGATGGCCGTGCAATGACCACTCACCTAGAGGAC ATGATCGGCACCGAGAGTGAGAAGGTCAGAATCTGGAACACGGCCGAGACCAAGTTTACTCGTCTGGAATCCAAA CTCCCAGCCTACACACTTATTGCTACCCAGACGCCGAAGGTCGGACGGCCGCGGGAACAGGCTTCCGCTCCCGAT TTCACTGCCATTATTATGACCCTCGTTCGTCTCGAGCGCTGCAAAACAGATGTTCTCATCACCATTAACGTGCCA CATATAAAAGGCGAATATGACGAGGAGGATGTCGATCTCGAGCTCGGCAAACAAGGAAAGCATATTGGCGATGCC GTCATGTACGCGGACCGCATCTGGAAGACACTCAAAATCAAGGACTGCAGTCTATTCGGCGAGCCGTAA |
| Transcript | >Hirsu2|6173 ATGTCTTCCTATAGTGCCACGCCACTCTACGGTGGCGCTATAGTCTGCGACCTCCCGGACAATTTCGCCGATGTA AGCAAACTCCGGCAAGTACCCGATAATCAGGAAGTATGGATCGACAAGAACGGCTTTACCAGCATCATTTTTGAT ATCACTGAGCGGGTCGGCGGACCCGGCTGCGGCCCCGAGATCGATGGCCGTGCAATGACCACTCACCTAGAGGAC ATGATCGGCACCGAGAGTGAGAAGGTCAGAATCTGGAACACGGCCGAGACCAAGTTTACTCGTCTGGAATCCAAA CTCCCAGCCTACACACTTATTGCTACCCAGACGCCGAAGGTCGGACGGCCGCGGGAACAGGCTTCCGCTCCCGAT TTCACTGCCATTATTATGACCCTCGTTCGTCTCGAGCGCTGCAAAACAGATGTTCTCATCACCATTAACGTGCCA CATATAAAAGGCGAATATGACGAGGAGGATGTCGATCTCGAGCTCGGCAAACAAGGAAAGCATATTGGCGATGCC GTCATGTACGCGGACCGCATCTGGAAGACACTCAAAATCAAGGACTGCAGTCTATTCGGCGAGCCGTAA |
| Gene | >Hirsu2|6173 ATGTCTTCCTATAGTGCCACGCCACTCTACGGTGGCGCTATAGTCTGCGACCTCCCGGACAATTTCGCCGATGTA AGGTAACAGCGGGCTTCCCCCCCTCCGTCCTCTTCAACGACCGTCGCAATGGTCACGACATCTCTAATTCGAAGC TCCACCTCTACATTCAGCAAACTCCGGCAAGTACCCGATAATCAGGAAGTATGGATCGACAAGAACGGCTTTACC AGCATCATTTTTGATATCACTGAGCGGGTCGGCGGACCCGGCTGCGGCCCCGAGATCGATGGCCGTGCAATGACC ACTCACCTAGAGGACATGATCGGCACCGAGAGTGAGAAGGTCAGAATCTGGAACACGGCCGAGACCAAGTTTACT CGTCTGGAGTAAGGCCGCTTCCTCACCCCTTATTACTTTTGAGCGAACAGATCAGTACCGGCTGAAGCGCGTCCA CGGTGCCCAGATCCAAACTCCCAGCCTACACACTTATTGCTACCCAGACGCCGAAGGTCGGACGGCCGCGGGAAC AGGCTTCCGCTCCCGATTTCACTGCCATTATTATGACCCTCGTTCGTCTCGAGCGCTGCAAAACAGATGTTCTCA TCACCATTAACGTGCCACATATAAAAGGCGAATATGACGAGGAGGATGTCGATCTCGAGCTCGGCAAACAAGGAA AGCATATTGGCGATGCCGTCATGTACGCGGACCGCATCTGGAAGACACTCAAAATCAAGGACTGCAGTCTATTCG GCGAGCCGTAA |