Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6149
Gene name
LocationContig_3116:193..898
Strand+
Gene length (bp)705
Transcript length (bp)546
Coding sequence length (bp)546
Protein length (aa) 182

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Endoplasmic reticulum Signal peptide 0.1692 0.1218 0.814 0.1558 0.1607 0.1347 0.6811 0.2343 0.3614 0.0225

SignalP

SignalP signal predicted Location Score
Yes 1 - 31 0.999719

Transmembrane Domains

Domain # Start End Length
1 10 32 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3325
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|126
Ophiocordyceps australis map64 (Brazil) OphauB2|3238
Ophiocordyceps camponoti-floridani Ophcf2|06628
Ophiocordyceps camponoti-rufipedis Ophun1|6818
Ophiocordyceps kimflemingae Ophio5|7617
Ophiocordyceps subramaniannii Hirsu2|6149 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6149
MASLAGLLPASRALALLLLLLLLLAPAPALSADGGATTSAEKDVPDWASNNALQLTLSTKPGLQFTTIPLTENLG
LNESERTRGVVSIDGFLRPANVSNYNQIGAPDDVVYLSCDKPGGDNFITPDKMLNDLMARRPKAILLFSTSRNWC
SLSSEDPLATPPRTRPSTTRAAAAATTRPSP*
Coding >Hirsu2|6149
ATGGCCTCGCTGGCCGGCCTGCTCCCGGCCTCCCGCGCCCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTCGCG
CCCGCGCCCGCGCTGTCGGCCGATGGCGGCGCGACCACGTCGGCCGAGAAGGACGTGCCCGATTGGGCTTCCAAC
AACGCCCTGCAGCTCACCCTCTCCACCAAGCCCGGCCTCCAGTTCACGACGATCCCGCTGACCGAGAACCTCGGC
CTCAACGAGTCGGAGCGGACCCGTGGCGTCGTCAGCATCGACGGCTTCCTGCGGCCCGCCAACGTCTCCAACTAC
AACCAGATCGGCGCCCCGGACGATGTCGTCTACCTCTCGTGCGACAAGCCGGGCGGCGACAACTTCATCACCCCC
GACAAGATGCTCAACGACCTCATGGCCCGCCGCCCCAAGGCCATCCTGCTCTTCTCGACCAGCCGCAACTGGTGC
TCGCTCAGCAGCGAGGACCCGCTGGCAACACCACCGAGGACCAGGCCGTCAACGACCCGGGCGGCGGCGGCGGCA
ACAACTCGGCCGTCGCCATGA
Transcript >Hirsu2|6149
ATGGCCTCGCTGGCCGGCCTGCTCCCGGCCTCCCGCGCCCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTCGCG
CCCGCGCCCGCGCTGTCGGCCGATGGCGGCGCGACCACGTCGGCCGAGAAGGACGTGCCCGATTGGGCTTCCAAC
AACGCCCTGCAGCTCACCCTCTCCACCAAGCCCGGCCTCCAGTTCACGACGATCCCGCTGACCGAGAACCTCGGC
CTCAACGAGTCGGAGCGGACCCGTGGCGTCGTCAGCATCGACGGCTTCCTGCGGCCCGCCAACGTCTCCAACTAC
AACCAGATCGGCGCCCCGGACGATGTCGTCTACCTCTCGTGCGACAAGCCGGGCGGCGACAACTTCATCACCCCC
GACAAGATGCTCAACGACCTCATGGCCCGCCGCCCCAAGGCCATCCTGCTCTTCTCGACCAGCCGCAACTGGTGC
TCGCTCAGCAGCGAGGACCCGCTGGCAACACCACCGAGGACCAGGCCGTCAACGACCCGGGCGGCGGCGGCGGCA
ACAACTCGGCCGTCGCCATGA
Gene >Hirsu2|6149
ATGGCCTCGCTGGCCGGCCTGCTCCCGGCCTCCCGCGCCCTCGCCCTGCTGCTGCTGCTGCTGCTGCTGCTCGCG
CCCGCGCCCGCGCTGTCGGCCGATGGCGGCGCGACCACGTCGGCCGAGAAGGACGTGCCCGATTGGGCTTCCAAC
AACGCCCTGCAGCTCACCCTCTCCACCAAGCCCGGCCTCCAGTTCACGACGATCCCGCTGACCGAGAACCTCGGC
CTCAACGAGTCGGAGCGGACCCGTGGCGTGAGTCGTCCCCCCGTCCTTGGCCGTTCTCCGTTGCTAATTCGCCCT
CTGTCCAGGTCGTCAGCATCGACGGCTTCCTGCGGCCCGCCAACGTCTCCAACTACAACCAGATCGGCGCCCCGG
ACGATGTCGTCTACCTCTCGTGCGACAAGCCGGGCGGCGACAACTTCATCACCCCCGACAAGATGCTCAACGACC
TCATGGCCCGCCGCCCCAAGGCCATCCTGCTCTTCTCGACCAGCCGCAACTGGTGCTCGCTCAGCAGCGAGGACC
CGCTGTCCTTCACCAGCATCCTGACCATGGCCGACGCCGGCGAGGCCAGCAACGTCCTCAGCTACCTCGGCGGCA
ACGGCGGCAACAACGTCCGCGCCCTGATCCAGGGCAACACCACCGAGGACCAGGCCGTCAACGACCCGGGCGGCG
GCGGCGGCAACAACTCGGCCGTCGCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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