Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6124
Gene name
Location	Contig_310:387..1970
Strand	+
Gene length (bp)	1583
Transcript length (bp)	1404
Coding sequence length (bp)	1404
Protein length (aa)	468

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01494	FAD_binding_3	FAD binding domain	7.6E-07	314	349
PF00890	FAD_binding_2	FAD binding domain	2.3E-06	13	43

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9F131\|3HBH1_PSEAC	3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1	12	381	6.0E-21
sp\|Q3S4B7\|3HBH_POLNA	3-hydroxybenzoate 6-hydroxylase OS=Polaromonas naphthalenivorans (strain CJ2) GN=nagX PE=1 SV=1	32	384	4.0E-15
sp\|P86491\|6HN3M_PSEFL	6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1	114	413	4.0E-13
sp\|Q88FY2\|6HN3M_PSEPK	6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1	114	413	5.0E-13
sp\|Q5EXK1\|3HBH_KLEOX	3-hydroxybenzoate 6-hydroxylase OS=Klebsiella oxytoca GN=mhbM PE=1 SV=1	159	384	3.0E-12

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9F131\|3HBH1_PSEAC	3-hydroxybenzoate 6-hydroxylase 1 OS=Pseudomonas alcaligenes GN=xlnD PE=1 SV=1	12	381	6.0E-21
sp\|Q3S4B7\|3HBH_POLNA	3-hydroxybenzoate 6-hydroxylase OS=Polaromonas naphthalenivorans (strain CJ2) GN=nagX PE=1 SV=1	32	384	4.0E-15
sp\|P86491\|6HN3M_PSEFL	6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas fluorescens PE=1 SV=1	114	413	4.0E-13
sp\|Q88FY2\|6HN3M_PSEPK	6-hydroxynicotinate 3-monooxygenase OS=Pseudomonas putida (strain KT2440) GN=nicC PE=1 SV=1	114	413	5.0E-13
sp\|Q5EXK1\|3HBH_KLEOX	3-hydroxybenzoate 6-hydroxylase OS=Klebsiella oxytoca GN=mhbM PE=1 SV=1	159	384	3.0E-12
sp\|O81360\|ABA2_PRUAR	Zeaxanthin epoxidase, chloroplastic OS=Prunus armeniaca PE=2 SV=1	2	373	1.0E-11
sp\|Q53552\|NHG2_PSEPU	Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=4 SV=1	1	416	6.0E-10
sp\|Q0JCU7\|ZEP_ORYSJ	Zeaxanthin epoxidase, chloroplastic OS=Oryza sativa subsp. japonica GN=ZEP PE=2 SV=1	13	378	8.0E-09
sp\|Q0QFQ1\|3HBH2_PSEAC	3-hydroxybenzoate 6-hydroxylase 2 OS=Pseudomonas alcaligenes GN=hbzD PE=2 SV=1	114	384	2.0E-08
sp\|C3VEQ2\|ZEP_ONCHC	Zeaxanthin epoxidase, chloroplastic OS=Oncidium hybrid cultivar GN=ZEP PE=2 SV=1	126	378	3.0E-08
sp\|P23262\|NHG1_PSEPU	Salicylate hydroxylase OS=Pseudomonas putida GN=nahG PE=1 SV=4	29	416	3.0E-07

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GO

GO Term	Description	Terminal node
GO:0071949	FAD binding	Yes
GO:0036094	small molecule binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0043168	anion binding	No
GO:0000166	nucleotide binding	No
GO:0050660	flavin adenine dinucleotide binding	No
GO:0097159	organic cyclic compound binding	No
GO:1901363	heterocyclic compound binding	No
GO:0005488	binding	No
GO:0043167	ion binding	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 27	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6124 MASAPTASAALHVLIVGAGFGGLTAAIECRLRGMRVTLVEAYPTSAAYGDIIDFFPNGGRIIEKWEGGRVGRELM GVCISQGDQLRYCKADGTVIWEEPWVLEPHHYWRQFGGHRGQMHAVILRYARELGVELAFGDRAVRYLGAGPGAA RPGVVLAGGAELAADVVIAADGPRSIARQQVLGLPDNKVNSGYAIFRAHLSLTDEHRANPLLADFCDPASDMTQL WVARDLHMIVYTWNKGRELGWALTHKDTDDIGESWSFPAHKDDVLACLAQGGFEPKLAELVRATPAAKMVDYKLV WREPLATWLAPSARIALIGDAAHCHLPTSAQGGSQAMEDGVALAVCLARAAGDVPLALRVFERVRFNRSHVIHMA SILIRDGYHNIDWDGDDIKKNPQILNLPRPAWVIEHDVEAEAESHFDRLAADVRAGTPGSLAELSIPAGGDYEPE SRRVGQPRQEEAAAAGP*
Coding	>Hirsu2\|6124 ATGGCATCGGCTCCCACGGCTTCTGCCGCGCTGCACGTGCTCATCGTCGGGGCCGGCTTCGGCGGGCTGACGGCG GCGATCGAGTGCCGGCTGCGCGGGATGCGGGTGACGCTGGTGGAGGCGTACCCGACCAGCGCCGCCTACGGCGAC ATCATCGACTTCTTCCCCAACGGCGGGCGCATCATCGAGAAGTGGGAGGGCGGCCGGGTCGGGCGCGAGCTGATG GGCGTGTGCATCAGCCAGGGCGACCAGCTGCGCTACTGCAAGGCCGACGGCACCGTCATCTGGGAGGAGCCTTGG GTGCTGGAGCCGCACCACTACTGGCGCCAGTTCGGCGGCCACCGCGGCCAGATGCACGCTGTCATCCTGCGCTAC GCGCGCGAGCTCGGCGTCGAGCTGGCCTTTGGCGACCGCGCCGTCCGCTACCTCGGCGCCGGCCCCGGCGCCGCC CGGCCCGGCGTCGTCCTGGCCGGTGGGGCCGAGCTGGCGGCCGATGTCGTCATCGCCGCCGACGGGCCGCGCTCC ATCGCCCGCCAGCAGGTGCTCGGCCTGCCCGACAACAAGGTCAACAGCGGCTACGCCATCTTCCGCGCCCACCTG AGCCTGACGGACGAGCACCGCGCCAACCCGCTGCTGGCCGACTTCTGCGACCCGGCCTCGGACATGACCCAGCTC TGGGTCGCCCGCGACCTGCACATGATCGTCTACACCTGGAACAAGGGCCGCGAGCTCGGCTGGGCCCTGACGCAC AAGGACACCGACGACATCGGCGAGTCGTGGTCGTTCCCCGCCCACAAGGACGACGTGCTCGCCTGCCTGGCCCAG GGCGGCTTCGAGCCCAAGCTGGCGGAGCTGGTCCGGGCCACGCCGGCGGCCAAGATGGTCGACTACAAGCTCGTC TGGCGCGAGCCGCTGGCGACCTGGCTGGCGCCCTCGGCCCGCATCGCCCTCATCGGCGACGCCGCCCACTGCCAC CTGCCGACCTCGGCCCAGGGCGGCTCGCAGGCCATGGAGGACGGCGTGGCGCTGGCCGTGTGCCTGGCCCGCGCC GCCGGCGACGTGCCGCTGGCCCTGCGCGTCTTCGAGCGCGTCCGCTTCAACCGGTCCCACGTCATCCACATGGCC TCCATCCTCATCCGCGACGGCTACCACAACATCGACTGGGACGGCGACGACATCAAGAAGAACCCGCAGATCCTC AACCTGCCCCGGCCCGCCTGGGTCATCGAGCACGACGTCGAGGCCGAGGCCGAGTCCCACTTCGACCGCCTCGCC GCCGACGTCCGCGCCGGCACGCCGGGCTCCCTCGCCGAGCTGTCCATCCCCGCCGGCGGCGATTACGAGCCGGAG AGCCGACGGGTTGGCCAGCCGCGACAGGAGGAGGCCGCCGCCGCCGGCCCTTGA
Transcript	>Hirsu2\|6124 ATGGCATCGGCTCCCACGGCTTCTGCCGCGCTGCACGTGCTCATCGTCGGGGCCGGCTTCGGCGGGCTGACGGCG GCGATCGAGTGCCGGCTGCGCGGGATGCGGGTGACGCTGGTGGAGGCGTACCCGACCAGCGCCGCCTACGGCGAC ATCATCGACTTCTTCCCCAACGGCGGGCGCATCATCGAGAAGTGGGAGGGCGGCCGGGTCGGGCGCGAGCTGATG GGCGTGTGCATCAGCCAGGGCGACCAGCTGCGCTACTGCAAGGCCGACGGCACCGTCATCTGGGAGGAGCCTTGG GTGCTGGAGCCGCACCACTACTGGCGCCAGTTCGGCGGCCACCGCGGCCAGATGCACGCTGTCATCCTGCGCTAC GCGCGCGAGCTCGGCGTCGAGCTGGCCTTTGGCGACCGCGCCGTCCGCTACCTCGGCGCCGGCCCCGGCGCCGCC CGGCCCGGCGTCGTCCTGGCCGGTGGGGCCGAGCTGGCGGCCGATGTCGTCATCGCCGCCGACGGGCCGCGCTCC ATCGCCCGCCAGCAGGTGCTCGGCCTGCCCGACAACAAGGTCAACAGCGGCTACGCCATCTTCCGCGCCCACCTG AGCCTGACGGACGAGCACCGCGCCAACCCGCTGCTGGCCGACTTCTGCGACCCGGCCTCGGACATGACCCAGCTC TGGGTCGCCCGCGACCTGCACATGATCGTCTACACCTGGAACAAGGGCCGCGAGCTCGGCTGGGCCCTGACGCAC AAGGACACCGACGACATCGGCGAGTCGTGGTCGTTCCCCGCCCACAAGGACGACGTGCTCGCCTGCCTGGCCCAG GGCGGCTTCGAGCCCAAGCTGGCGGAGCTGGTCCGGGCCACGCCGGCGGCCAAGATGGTCGACTACAAGCTCGTC TGGCGCGAGCCGCTGGCGACCTGGCTGGCGCCCTCGGCCCGCATCGCCCTCATCGGCGACGCCGCCCACTGCCAC CTGCCGACCTCGGCCCAGGGCGGCTCGCAGGCCATGGAGGACGGCGTGGCGCTGGCCGTGTGCCTGGCCCGCGCC GCCGGCGACGTGCCGCTGGCCCTGCGCGTCTTCGAGCGCGTCCGCTTCAACCGGTCCCACGTCATCCACATGGCC TCCATCCTCATCCGCGACGGCTACCACAACATCGACTGGGACGGCGACGACATCAAGAAGAACCCGCAGATCCTC AACCTGCCCCGGCCCGCCTGGGTCATCGAGCACGACGTCGAGGCCGAGGCCGAGTCCCACTTCGACCGCCTCGCC GCCGACGTCCGCGCCGGCACGCCGGGCTCCCTCGCCGAGCTGTCCATCCCCGCCGGCGGCGATTACGAGCCGGAG AGCCGACGGGTTGGCCAGCCGCGACAGGAGGAGGCCGCCGCCGCCGGCCCTTGA
Gene	>Hirsu2\|6124 ATGGCATCGGCTCCCACGGCTTCTGCCGCGCTGCACGTGCTCATCGTCGGGGCCGGCTTCGGCGGGCTGACGGCG GCGATCGAGTGCCGGCTGCGCGGGATGCGGGTGACGCTGGTGGAGGCGTACCCGACCAGCGCCGCCTACGGCGAC ATCATCGACTTCTTCCCCAACGGCGGGCGCATCATCGAGAAGTGGGAGGGCGGCCGGGTCGGGCGCGAGCTGATG GGCGTGTGCATCAGCCAGGGCGACCAGCTGCGCTACTGCAAGGCCGACGGCACCGTCATCTGGGAGGAGCCTTGG GTGCTGGAGCCGCACCACTACTGGCGCCAGTTCGGCGGCCACCGCGGCCAGATGCACGCTGTCATCCTGCGCTAC GCGCGCGAGCTCGGCGTCGAGCTGGCCTTTGGCGACCGCGCCGTCCGCTACCTCGGCGCCGGCCCCGGCGCCGCC CGGCCCGGCGTCGTCCTGGCCGGTGGGGCCGAGCTGGCGGCCGATGTCGTCATCGCCGCCGACGGGCCGCGCTCC ATCGCCCGCCAGCAGGTGCTCGGCCTGCCCGACAACAAGGTCAACAGCGGCTACGCCATCTTCCGCGCCCACCTG AGCCTGACGGACGAGCACCGCGCCAACCCGCTGCTGGCCGACTTCTGCGACCCGGCCTCGGACATGACCCAGCTC TGGGTCGCCCGCGACCTGCACATGATCGTCTACACCTGGAACAAGGGCCGCGAGCTCGGCTGGGCCCTGACGCAC AAGGTTGGCCTCTCTGTCTCTCTGTCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNCTCTCTCTCTGTGTGTGTGTCCGTCGTTGCTGTTGTCGTTTCTCGCTGGCTTGGCTCACC GGACACTGACGATGCCGGAACCCGTGCCGCAGGACACCGACGACATCGGCGAGTCGTGGTCGTTCCCCGCCCACA AGGACGACGTGCTCGCCTGCCTGGCCCAGGGCGGCTTCGAGCCCAAGCTGGCGGAGCTGGTCCGGGCCACGCCGG CGGCCAAGATGGTCGACTACAAGCTCGTCTGGCGCGAGCCGCTGGCGACCTGGCTGGCGCCCTCGGCCCGCATCG CCCTCATCGGCGACGCCGCCCACTGCCACCTGCCGACCTCGGCCCAGGGCGGCTCGCAGGCCATGGAGGACGGCG TGGCGCTGGCCGTGTGCCTGGCCCGCGCCGCCGGCGACGTGCCGCTGGCCCTGCGCGTCTTCGAGCGCGTCCGCT TCAACCGGTCCCACGTCATCCACATGGCCTCCATCCTCATCCGCGACGGCTACCACAACATCGACTGGGACGGCG ACGACATCAAGAAGAACCCGCAGATCCTCAACCTGCCCCGGCCCGCCTGGGTCATCGAGCACGACGTCGAGGCCG AGGCCGAGTCCCACTTCGACCGCCTCGCCGCCGACGTCCGCGCCGGCACGCCGGGCTCCCTCGCCGAGCTGTCCA TCCCCGCCGGCGGCGATTACGAGCCGGAGAGCCGACGGGTTGGCCAGCCGCGACAGGAGGAGGCCGCCGCCGCCG GCCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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