© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6121 |
| Gene name | |
| Location | Contig_31:49898..50413 |
| Strand | - |
| Gene length (bp) | 515 |
| Transcript length (bp) | 336 |
| Coding sequence length (bp) | 336 |
| Protein length (aa) | 112 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|C7FF04|PPO3_AGABI | Polyphenol oxidase 3 OS=Agaricus bisporus GN=PPO3 PE=1 SV=1 | 29 | 106 | 5.0E-08 |
| sp|Q8J130|TYRO_ASPFU | Tyrosinase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tyr1 PE=3 SV=2 | 23 | 107 | 3.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.16 | 0.0649 | 0.8998 | 0.0757 | 0.08 | 0.0567 | 0.1965 | 0.2312 | 0.1588 | 0.0102 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 21 | 0.999777 |
| Orthofinder run ID | 4 |
| Orthogroup | 6963 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|1657 |
| Ophiocordyceps subramaniannii | Hirsu2|6110 |
| Ophiocordyceps subramaniannii | Hirsu2|6121 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6121 MMLPNVVALNLVFGTALVVVAQNSGRPFPVVGVQSSRSVRRNVNDLFDERGPEWDLYVQALSAMQDADSDDPLSW FQIGAIHGQPRIEWNNTGRGIPGNDAGYCTHSFSRC* |
| Coding | >Hirsu2|6121 ATGATGCTCCCCAACGTGGTAGCCTTGAACCTGGTGTTCGGGACGGCCTTGGTGGTCGTGGCCCAGAACTCTGGC CGTCCCTTCCCCGTCGTCGGCGTCCAGTCCAGCCGGAGCGTCAGGCGCAACGTCAACGACCTCTTTGACGAGAGG GGGCCGGAATGGGACCTCTACGTGCAGGCGCTCAGTGCCATGCAGGATGCCGACTCGGACGATCCCCTGTCGTGG TTCCAAATCGGAGCGATCCACGGCCAGCCGCGCATCGAGTGGAACAACACTGGCCGTGGAATTCCTGGCAATGAT GCAGGCTATTGTACTCATAGCTTCTCGAGGTGTTGA |
| Transcript | >Hirsu2|6121 ATGATGCTCCCCAACGTGGTAGCCTTGAACCTGGTGTTCGGGACGGCCTTGGTGGTCGTGGCCCAGAACTCTGGC CGTCCCTTCCCCGTCGTCGGCGTCCAGTCCAGCCGGAGCGTCAGGCGCAACGTCAACGACCTCTTTGACGAGAGG GGGCCGGAATGGGACCTCTACGTGCAGGCGCTCAGTGCCATGCAGGATGCCGACTCGGACGATCCCCTGTCGTGG TTCCAAATCGGAGCGATCCACGGCCAGCCGCGCATCGAGTGGAACAACACTGGCCGTGGAATTCCTGGCAATGAT GCAGGCTATTGTACTCATAGCTTCTCGAGGTGTTGA |
| Gene | >Hirsu2|6121 ATGATGCTCCCCAACGTGGTAGCCTTGAACCTGGTGTTCGGGACGGCCTTGGTGGTCGTGGCCCAGAACTCTGGC CGTCCCTTCCCCGTCGTCGGCGTCCAGTCCAGCCGGAGCGTCAGGCGCAACGTCAACGACCTCTTTGACGAGAGG GGGCCGGAATGGTACGGAGCCTGTCCTTGAGCCGATATCCATGTCTCGACGGTGTTCTAATCCTGTACCCTTGCC GGGATGCAGGGACCTCTACGTGCAGGCGCTCAGTGCCATGCAGGATGCCGACTCGGACGATCCCCTGTCGTGGTT CCAAATCGGAGGTAACTTGCAGGCCGGTACGGACGGTGCTTCTCGCTCGATGGCTGACCTGCCCCAGCGATCCAC GGCCAGCCGCGCATCGAGTGGAACAACACTGGCCGTGGAATTCCTGGCAATGATGCAGGCTATTGTACTCATAGC GTAGGTGCTTCTCGAATCTGGTTCCCGACTACTTACGCATGTCCGCGCAGTTCTCGAGGTGTTGA |