Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6111
Gene name
LocationContig_31:29335..29653
Strand+
Gene length (bp)318
Transcript length (bp)318
Coding sequence length (bp)318
Protein length (aa) 106

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16541 AltA1 Alternaria alternata allergen 1 9.7E-08 27 103

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0821 0.0514 0.9673 0.0772 0.0967 0.0199 0.0525 0.0869 0.0408 0.0067

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.998986

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup910
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6247
Ophiocordyceps australis map64 (Brazil) OphauB2|1392
Ophiocordyceps australis map64 (Brazil) OphauB2|6862
Ophiocordyceps camponoti-floridani Ophcf2|02510
Ophiocordyceps camponoti-rufipedis Ophun1|5985
Ophiocordyceps kimflemingae Ophio5|7685
Ophiocordyceps subramaniannii Hirsu2|6111 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6111
MRAIAIASSLAALAAAAAAERTENIRISKFLVRKNAAPDGTTIRVVDFKLDGDDAHGLGCTVQAPAYYPKPSEVS
TCGSSKYRFALHPGNDTEFSLRIYHETGLA*
Coding >Hirsu2|6111
ATGCGCGCCATCGCCATCGCCAGCAGCCTCGCCGCCCTCGCCGCCGCCGCCGCGGCCGAGCGGACGGAGAACATC
CGGATCAGCAAGTTCCTGGTCCGCAAGAACGCCGCGCCCGACGGTACCACCATCCGCGTCGTCGACTTCAAGCTC
GACGGTGACGATGCCCACGGCCTTGGCTGCACGGTCCAGGCCCCGGCCTACTACCCCAAGCCGTCCGAGGTCAGC
ACGTGCGGCAGCTCCAAGTACAGGTTCGCCCTTCATCCCGGCAACGACACCGAGTTCAGCTTGCGCATCTATCAT
GAGACGGGCTTAGCGTAA
Transcript >Hirsu2|6111
ATGCGCGCCATCGCCATCGCCAGCAGCCTCGCCGCCCTCGCCGCCGCCGCCGCGGCCGAGCGGACGGAGAACATC
CGGATCAGCAAGTTCCTGGTCCGCAAGAACGCCGCGCCCGACGGTACCACCATCCGCGTCGTCGACTTCAAGCTC
GACGGTGACGATGCCCACGGCCTTGGCTGCACGGTCCAGGCCCCGGCCTACTACCCCAAGCCGTCCGAGGTCAGC
ACGTGCGGCAGCTCCAAGTACAGGTTCGCCCTTCATCCCGGCAACGACACCGAGTTCAGCTTGCGCATCTATCAT
GAGACGGGCTTAGCGTAA
Gene >Hirsu2|6111
ATGCGCGCCATCGCCATCGCCAGCAGCCTCGCCGCCCTCGCCGCCGCCGCCGCGGCCGAGCGGACGGAGAACATC
CGGATCAGCAAGTTCCTGGTCCGCAAGAACGCCGCGCCCGACGGTACCACCATCCGCGTCGTCGACTTCAAGCTC
GACGGTGACGATGCCCACGGCCTTGGCTGCACGGTCCAGGCCCCGGCCTACTACCCCAAGCCGTCCGAGGTCAGC
ACGTGCGGCAGCTCCAAGTACAGGTTCGCCCTTCATCCCGGCAACGACACCGAGTTCAGCTTGCGCATCTATCAT
GAGACGGGCTTAGCGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail