Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6100
Gene name
Location	Contig_3094:37..529
Strand	+
Gene length (bp)	492
Transcript length (bp)	420
Coding sequence length (bp)	420
Protein length (aa)	140

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13921	Myb_DNA-bind_6	Myb-like DNA-binding domain	1.6E-08	15	60
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	1.6E-05	64	103

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6100 MPPPAARPRGPKLKFTAEDDQLLIELKEQKNLTWKQIADFFPGRSSGTLQVRYCTKLKAKTTLWTEDMDQKLRKA LQDYENEKWRIVAHKVGSGFTPAACRDRAGQLAGEEPEHLWQSLSPKAASLPESMEMTHSQRPW*
Coding	>Hirsu2\|6100 ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGACCAAAAACTGCGAAAGGCC CTCCAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGC CGCGACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCG CTTCCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA
Transcript	>Hirsu2\|6100 ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGACCAAAAACTGCGAAAGGCC CTCCAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGC CGCGACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCG CTTCCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA
Gene	>Hirsu2\|6100 ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGTACGCCCCTCTTTCTCTGTC TGCTTCCTCTCTTCCCCCCCGTCCCTTGGACTGACGGCAACAAAATGACAGGACCAAAAACTGCGAAAGGCCCTC CAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGCCGC GACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCGCTT CCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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