Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6100
Gene name
LocationContig_3094:37..529
Strand+
Gene length (bp)492
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13921 Myb_DNA-bind_6 Myb-like DNA-binding domain 1.5E-08 15 60
PF00249 Myb_DNA-binding Myb-like DNA-binding domain 1.4E-05 64 103

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6100
MPPPAARPRGPKLKFTAEDDQLLIELKEQKNLTWKQIADFFPGRSSGTLQVRYCTKLKAKTTLWTEDMDQKLRKA
LQDYENEKWRIVAHKVGSGFTPAACRDRAGQLAGEEPEHLWQSLSPKAASLPESMEMTHSQRPW*
Coding >Hirsu2|6100
ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG
CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG
GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGACCAAAAACTGCGAAAGGCC
CTCCAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGC
CGCGACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCG
CTTCCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA
Transcript >Hirsu2|6100
ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG
CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG
GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGACCAAAAACTGCGAAAGGCC
CTCCAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGC
CGCGACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCG
CTTCCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA
Gene >Hirsu2|6100
ATGCCGCCGCCGGCCGCCCGGCCGCGCGGGCCCAAGCTCAAGTTCACGGCCGAGGACGACCAGCTGCTGATTGAG
CTCAAGGAGCAGAAGAACTTGACGTGGAAGCAGATTGCCGACTTCTTCCCCGGCCGCTCCTCGGGCACGCTGCAG
GTGCGCTACTGCACCAAGCTCAAGGCCAAGACGACGCTGTGGACCGAGGACATGGTACGCCCCTCTTTCTCTGTC
TGCTTCCTCTCTTCCCCCCCGTCCCTTGGACTGACGGCAACAAAATGACAGGACCAAAAACTGCGAAAGGCCCTC
CAGGACTATGAAAACGAGAAGTGGCGCATCGTCGCCCACAAGGTCGGCTCCGGCTTCACCCCCGCCGCCTGCCGC
GACCGCGCCGGGCAGCTGGCCGGCGAGGAGCCCGAGCACCTCTGGCAGTCGCTGTCTCCCAAGGCGGCCTCGCTT
CCCGAGTCGATGGAGATGACGCACTCGCAGCGGCCCTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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