Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|61
Gene name
LocationContig_1006:3378..3955
Strand+
Gene length (bp)577
Transcript length (bp)465
Coding sequence length (bp)465
Protein length (aa) 155

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12770 CHAT CHAT domain 3.4E-06 52 109

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.7119 0.5838 0.3353 0.1831 0.254 0.0419 0.1041 0.0791 0.0795 0.0262

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup531
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4184
Ophiocordyceps camponoti-rufipedis Ophun1|5383
Ophiocordyceps kimflemingae Ophio5|7314
Ophiocordyceps subramaniannii Hirsu2|3302
Ophiocordyceps subramaniannii Hirsu2|61 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9455

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|61
MKSPARGCPGLDEAVAPSKQLVTARGIRNVDPIVAGNLAAMVMKRFDRCGSTAELDLAVVLAGMAVGAPPFLAFL
SACSTGAGDTARLADGAVHLVNALQLAGFRHVVGVVDAHWVAIITTITTMTQINAQAPPSKSKDRTHGSLVFVVG
SGDT*
Coding >Hirsu2|61
ATGAAGTCTCCGGCGCGCGGCTGCCCGGGTCTGGACGAGGCCGTCGCGCCGTCCAAGCAGCTGGTCACCGCACGC
GGGATCAGAAACGTCGATCCGATCGTGGCGGGCAACCTGGCGGCCATGGTGATGAAGCGCTTCGACCGATGCGGC
TCCACGGCTGAGCTGGACCTGGCCGTCGTCCTGGCCGGCATGGCCGTCGGCGCGCCGCCCTTCCTCGCCTTTCTG
TCGGCCTGCTCGACGGGCGCCGGCGACACGGCCCGCCTGGCCGACGGGGCCGTCCACCTCGTCAACGCACTCCAG
CTCGCCGGCTTCCGCCACGTCGTCGGTGTCGTCGACGCCCACTGGGTCGCCATCATCACCACCATCACCACCATG
ACCCAAATCAACGCGCAGGCTCCGCCGTCCAAGTCGAAGGACAGAACACACGGGAGTCTTGTCTTCGTCGTCGGC
AGTGGCGACACCTGA
Transcript >Hirsu2|61
ATGAAGTCTCCGGCGCGCGGCTGCCCGGGTCTGGACGAGGCCGTCGCGCCGTCCAAGCAGCTGGTCACCGCACGC
GGGATCAGAAACGTCGATCCGATCGTGGCGGGCAACCTGGCGGCCATGGTGATGAAGCGCTTCGACCGATGCGGC
TCCACGGCTGAGCTGGACCTGGCCGTCGTCCTGGCCGGCATGGCCGTCGGCGCGCCGCCCTTCCTCGCCTTTCTG
TCGGCCTGCTCGACGGGCGCCGGCGACACGGCCCGCCTGGCCGACGGGGCCGTCCACCTCGTCAACGCACTCCAG
CTCGCCGGCTTCCGCCACGTCGTCGGTGTCGTCGACGCCCACTGGGTCGCCATCATCACCACCATCACCACCATG
ACCCAAATCAACGCGCAGGCTCCGCCGTCCAAGTCGAAGGACAGAACACACGGGAGTCTTGTCTTCGTCGTCGGC
AGTGGCGACACCTGA
Gene >Hirsu2|61
ATGAAGTCTCCGGCGCGCGGCTGCCGTAAGACTCGGAGCGGGAGCTGGCGCTGGCGCGGGATCACGAGAATACCG
GCAACCCAGCGGGTCTGGACGAGGCCGTCGCGCCGTCCAAGCAGCTGGTCACCGCACGCGGGATCAGAAACGTCG
ATCCGATCGTGGCGGGCAACCTGGCGGCCATGGTGATGAAGCGCTTCGACCGATGCGGCTCCACGGCTGAGCTGG
ACCTGGCCGTCGTCCTGGCCGGCATGGCCGTCGGCGCGCCGCCCTTCCTCGCCTTTCTGTCGGCCTGCTCGACGG
GCGCCGGCGACACGGCCCGCCTGGCCGACGGGGCCGTCCACCTCGTCAACGCACTCCAGCTCGCCGGCTTCCGCC
ACGTCGTCGGTGTCGTCGACGCCCACTGGGTCGCGTAAGTCCACTTCGGCATTTAGGCTTCGTTGGGGGGGCGGC
AGGGGCATGAAGCATCATCACCACCATCACCACCATGACCCAAATCAACGCGCAGGCTCCGCCGTCCAAGTCGAA
GGACAGAACACACGGGAGTCTTGTCTTCGTCGTCGGCAGTGGCGACACCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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