Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6088
Gene name
LocationContig_3083:26..895
Strand-
Gene length (bp)869
Transcript length (bp)666
Coding sequence length (bp)666
Protein length (aa) 222

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03619 Solute_trans_a Organic solute transporter Ostalpha 4.8E-47 35 209

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 36 200 4.0E-18
sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 35 121 1.0E-17
sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 32 209 5.0E-17
sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 27 209 9.0E-16
sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 27 209 9.0E-16
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Swissprot ID Swissprot Description Start End E-value
sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium discoideum GN=tmem184A PE=3 SV=1 36 200 4.0E-18
sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium discoideum GN=tmem184C PE=3 SV=1 35 121 1.0E-17
sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1 32 209 5.0E-17
sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1 27 209 9.0E-16
sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2 27 209 9.0E-16
sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1 25 209 9.0E-16
sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1 30 202 2.0E-15
sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2 SV=1 30 202 2.0E-15
sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1 44 209 3.0E-15
sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2 44 209 7.0E-15
sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1 44 209 8.0E-15
sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1 32 196 2.0E-14
sp|Q17QL9|T184C_BOVIN Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1 27 209 3.0E-14
sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2 SV=1 32 196 3.0E-14
sp|Q75JN3|T1842_DICDI Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium discoideum GN=tmem184B PE=3 SV=1 36 209 5.0E-14
sp|Q94CA0|LAZH1_ARATH Protein LAZ1 homolog 1 OS=Arabidopsis thaliana GN=At1g77220 PE=2 SV=1 37 200 5.0E-14
sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1 27 209 1.0E-13
sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1 36 200 2.0E-13
sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2 SV=1 36 209 2.0E-13
sp|F4JTN2|LAZ1_ARATH Protein LAZ1 OS=Arabidopsis thaliana GN=LAZ1 PE=1 SV=1 36 200 7.0E-13
sp|Q5BPZ5|LAZH2_ARATH Protein LAZ1 homolog 2 OS=Arabidopsis thaliana GN=At1g23070 PE=2 SV=1 28 114 4.0E-12
sp|Q09906|TM184_SCHPO Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1 SV=1 43 206 2.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 32 54 22
2 67 89 22
3 104 123 19
4 161 183 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6088
MLNSTCNSTLEDLRISRGDEVLLVGPLDFHDLARVIAASCTLIAVAMSLYLAWMHALHYTQPREQRYIIRILFMV
PVYAVSSYLQLQWYWHAIYFQVISDCYEAFAIASFFALLCHYVAPDLHAQKAYFREMRPIKAWVWPVNWFAACCG
RHRGPWRTPASGLTWFNIIWIGIYHYCFIRVAMTISAVVSQYFGRYCESSNSPVFGHIWEETPADRVKETR*
Coding >Hirsu2|6088
ATGCTGAATTCAACATGCAATTCCACCCTCGAGGACCTTAGGATATCCCGCGGCGACGAGGTGCTCCTGGTCGGG
CCCCTCGACTTCCACGACCTGGCCCGCGTCATCGCCGCCTCGTGCACCCTCATCGCCGTCGCCATGAGCCTCTAC
CTGGCCTGGATGCACGCCCTGCACTACACCCAGCCGCGCGAGCAGCGATACATCATCCGCATCCTCTTCATGGTG
CCCGTCTACGCCGTCTCGTCGTACCTCCAGCTCCAGTGGTACTGGCACGCCATCTACTTCCAGGTCATCTCCGAC
TGCTACGAGGCCTTCGCCATCGCCTCCTTCTTCGCCCTCCTCTGCCACTACGTCGCCCCGGACCTGCACGCCCAG
AAGGCCTACTTCCGCGAGATGCGCCCCATCAAGGCCTGGGTCTGGCCCGTCAACTGGTTCGCCGCCTGCTGCGGC
CGCCACCGCGGGCCCTGGCGCACCCCGGCCTCGGGCCTGACCTGGTTCAACATCATCTGGATCGGCATCTACCAC
TACTGCTTCATCCGCGTCGCCATGACCATCTCCGCCGTCGTCTCCCAGTACTTTGGCCGCTACTGCGAGAGTTCC
AACAGCCCCGTCTTTGGCCACATCTGGGAGGAGACACCGGCGGACAGAGTGAAGGAGACAAGGTAA
Transcript >Hirsu2|6088
ATGCTGAATTCAACATGCAATTCCACCCTCGAGGACCTTAGGATATCCCGCGGCGACGAGGTGCTCCTGGTCGGG
CCCCTCGACTTCCACGACCTGGCCCGCGTCATCGCCGCCTCGTGCACCCTCATCGCCGTCGCCATGAGCCTCTAC
CTGGCCTGGATGCACGCCCTGCACTACACCCAGCCGCGCGAGCAGCGATACATCATCCGCATCCTCTTCATGGTG
CCCGTCTACGCCGTCTCGTCGTACCTCCAGCTCCAGTGGTACTGGCACGCCATCTACTTCCAGGTCATCTCCGAC
TGCTACGAGGCCTTCGCCATCGCCTCCTTCTTCGCCCTCCTCTGCCACTACGTCGCCCCGGACCTGCACGCCCAG
AAGGCCTACTTCCGCGAGATGCGCCCCATCAAGGCCTGGGTCTGGCCCGTCAACTGGTTCGCCGCCTGCTGCGGC
CGCCACCGCGGGCCCTGGCGCACCCCGGCCTCGGGCCTGACCTGGTTCAACATCATCTGGATCGGCATCTACCAC
TACTGCTTCATCCGCGTCGCCATGACCATCTCCGCCGTCGTCTCCCAGTACTTTGGCCGCTACTGCGAGAGTTCC
AACAGCCCCGTCTTTGGCCACATCTGGGAGGAGACACCGGCGGACAGAGTGAAGGAGACAAGGTAA
Gene >Hirsu2|6088
ATGCTGAATTCAACATGCAATTCCACCCTCGAGGACCTTAGGAGTCCGTCTCTTCCCCTTCTCCCGCTCCCTCGG
CGCCGCCGTCTGTCGACGCGCACCTGGCTGACCGGCTCGTCTGCAGTATCCCGCGGCGACGAGGTGCTCCTGGTC
GGGCCCCTCGACTTCCACGACCTGGCCCGCGTCATCGCCGCCTCGTGCACCCTCATCGCCGTCGCCATGAGCCTC
TACCTGGCCTGGATGCACGCCCTGCACTACACCCAGCCGCGCGAGCAGCGATAGTGAGAGATTCCTTTCCTTTCC
CGTGAGAGCCGAAAGACGCCCCGCCTGACTCGGAACAGCATCATCCGCATCCTCTTCATGGTGCCCGTCTACGCC
GTCTCGTCGTACCTCCAGCTCCAGTGGTACTGGCACGCCATCTACTTCCAGGTCATCTCCGACTGCTACGAGGCC
TTCGCCATCGCCTCCTTCTTCGCCCTCCTCTGCCACTACGTCGCCCCGGACCTGCACGCCCAGAAGGCCTACTTC
CGCGAGATGCGCCCCATCAAGGCCTGGGTCTGGCCCGTCAACTGGTTCGCCGCCTGCTGCGGCCGCCACCGCGGG
CCCTGGCGCACCCCGGCCTCGGGCCTGACCTGGTTCAACATCATCTGGATCGGCATCTACCACTACTGCTTCATC
CGCGTCGCCATGACCATCTCCGCCGTCGTCTCCCAGTACTTTGGCCGCTACTGCGAGAGTTCCAACAGCCCCGTC
TTTGGCCACATCTGGGTGCGTCTTTCTCTCTCTCTCTCTCCTCTTTTTGTCTTTTTTTTTTGGAGGAGGAGGAGG
AGCAGGAGGAGACACCGGCGGACAGAGTGAAGGAGACAAGGTAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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