© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|6055 |
| Gene name | |
| Location | Contig_306:21754..22560 |
| Strand | - |
| Gene length (bp) | 806 |
| Transcript length (bp) | 684 |
| Coding sequence length (bp) | 684 |
| Protein length (aa) | 228 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02015 | Glyco_hydro_45 | Glycosyl hydrolase family 45 | 1.2E-67 | 22 | 223 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P45699|GUNK_FUSOX | Putative endoglucanase type K OS=Fusarium oxysporum PE=2 SV=1 | 4 | 225 | 2.0E-75 |
| sp|P43316|GUN5_HUMIN | Endoglucanase-5 OS=Humicola insolens PE=1 SV=1 | 23 | 225 | 5.0E-68 |
| sp|O97401|GUN_PHACE | Endoglucanase OS=Phaedon cochleariae PE=2 SV=1 | 19 | 224 | 4.0E-51 |
| sp|P54424|GUN1_USTMA | Endoglucanase 1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=EGL1 PE=2 SV=1 | 22 | 225 | 7.0E-32 |
| sp|P18126|GUNB_CELJU | Endoglucanase B OS=Cellvibrio japonicus (strain Ueda107) GN=celB PE=1 SV=1 | 23 | 225 | 8.0E-30 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008810 | cellulase activity | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6055 MNPHSARLVILSLVVAVVLADSGVTTRYWDCCKPSCAWPGKAQVSEPVRTCGKNDLWPEPLDSNAQSACNGADAY ACSNNGPWAVNDNLAYGFAAAKLAGQSEGNWCCACYELTFTSTSIAGKQMIVQVTNTGSDLGNNHFDLAFRGAGV GIFPQGCQSQFDGTWMGDPYGGYRNRNDCYNLPSGMFRDGCFFRFDWFQNAQNPTVEFHEVSCPQAMIDRTHCAR WS* |
| Coding | >Hirsu2|6055 ATGAATCCACATTCAGCCCGTTTGGTTATTCTCTCGCTCGTGGTGGCTGTTGTCCTTGCCGACTCTGGTGTCACT ACGCGATACTGGGACTGCTGCAAGCCCTCGTGCGCTTGGCCCGGTAAAGCGCAGGTATCGGAACCCGTGCGGACA TGCGGAAAGAACGATCTTTGGCCGGAGCCGCTTGACTCCAATGCACAGTCGGCTTGCAATGGCGCCGACGCGTAC GCATGCAGTAACAACGGACCATGGGCTGTCAACGATAACCTGGCGTACGGATTCGCGGCGGCCAAACTTGCTGGT CAGTCCGAGGGTAATTGGTGCTGTGCTTGTTACGAACTCACATTCACTTCGACGTCGATTGCTGGGAAGCAAATG ATCGTCCAGGTGACTAACACTGGTAGCGACCTAGGAAACAACCACTTCGATCTCGCCTTTCGCGGCGCCGGCGTG GGCATATTTCCGCAAGGATGTCAATCGCAATTTGATGGCACGTGGATGGGTGACCCATACGGTGGTTACCGGAAC AGGAATGATTGTTATAATCTTCCGTCGGGCATGTTCCGTGATGGCTGCTTCTTTCGTTTTGACTGGTTCCAGAAC GCCCAGAACCCAACTGTCGAGTTTCATGAGGTGTCTTGTCCGCAGGCCATGATTGACAGGACGCACTGTGCTCGT TGGAGTTGA |
| Transcript | >Hirsu2|6055 ATGAATCCACATTCAGCCCGTTTGGTTATTCTCTCGCTCGTGGTGGCTGTTGTCCTTGCCGACTCTGGTGTCACT ACGCGATACTGGGACTGCTGCAAGCCCTCGTGCGCTTGGCCCGGTAAAGCGCAGGTATCGGAACCCGTGCGGACA TGCGGAAAGAACGATCTTTGGCCGGAGCCGCTTGACTCCAATGCACAGTCGGCTTGCAATGGCGCCGACGCGTAC GCATGCAGTAACAACGGACCATGGGCTGTCAACGATAACCTGGCGTACGGATTCGCGGCGGCCAAACTTGCTGGT CAGTCCGAGGGTAATTGGTGCTGTGCTTGTTACGAACTCACATTCACTTCGACGTCGATTGCTGGGAAGCAAATG ATCGTCCAGGTGACTAACACTGGTAGCGACCTAGGAAACAACCACTTCGATCTCGCCTTTCGCGGCGCCGGCGTG GGCATATTTCCGCAAGGATGTCAATCGCAATTTGATGGCACGTGGATGGGTGACCCATACGGTGGTTACCGGAAC AGGAATGATTGTTATAATCTTCCGTCGGGCATGTTCCGTGATGGCTGCTTCTTTCGTTTTGACTGGTTCCAGAAC GCCCAGAACCCAACTGTCGAGTTTCATGAGGTGTCTTGTCCGCAGGCCATGATTGACAGGACGCACTGTGCTCGT TGGAGTTGA |
| Gene | >Hirsu2|6055 ATGAATCCACATTCAGCCCGTTTGGTTATTCTCTCGCTCGTGGTGGCTGTTGTCCTTGCCGACTCTGGTGTCACT ACGCGATACTGGGACTGCTGCAAGCCCTCGTGCGCTTGGCCCGGTAAAGCGCAGGTATCGGAACCCGTGCGGACA TGCGGAAAGAACGATCTTTGGCCGGAGCCGCTTGACTCCAATGCACAGTCGGCTTGCAATGGCGCCGACGCGTAC GCATGCAGTAACAACGGACCATGGGCTGTCAACGATAACCTGGCGTACGGATTCGCGGCGGCCAAACTTGCTGGT CAGTCCGAGGGTAATTGGTGCTGTGCTTGTTACGAGTAAGTCTGAACCGTTTCTGAGATTTTTGACGAATAATCA TACATTCCCACGGATCGCGAGGGCAGGTACAGCGATTGATTTGACTTGGTCTGACTGACATCCGGCAATGCCCAT TTGATAGACTCACATTCACTTCGACGTCGATTGCTGGGAAGCAAATGATCGTCCAGGTGACTAACACTGGTAGCG ACCTAGGAAACAACCACTTCGATCTCGCCTTTCGCGGCGCCGGCGTGGGCATATTTCCGCAAGGATGTCAATCGC AATTTGATGGCACGTGGATGGGTGACCCATACGGTGGTTACCGGAACAGGAATGATTGTTATAATCTTCCGTCGG GCATGTTCCGTGATGGCTGCTTCTTTCGTTTTGACTGGTTCCAGAACGCCCAGAACCCAACTGTCGAGTTTCATG AGGTGTCTTGTCCGCAGGCCATGATTGACAGGACGCACTGTGCTCGTTGGAGTTGA |