Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6052
Gene name
Location	Contig_306:11314..11917
Strand	-
Gene length (bp)	603
Transcript length (bp)	603
Coding sequence length (bp)	603
Protein length (aa)	201

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00011	HSP20	Hsp20/alpha crystallin family	7.4E-09	139	199

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P19752\|HSP30_NEUCR	30 kDa heat shock protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=hsp30 PE=3 SV=1	6	192	5.0E-40
sp\|P40920\|HSP30_EMENI	30 kDa heat shock protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp30 PE=2 SV=1	34	187	2.0E-27

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6052 MASSPGSVTSNPSVAHLVHLLQGINKYVHELGGLNDKQGHRHPEAAHGTFYPKFDVRELKDAFELYGELAGVQKK DIIIEFSEPQTLVVRGFIERCYSTAKPAEQTAPGSSATPSTKDTDQGKQTPLTTAEKIPSPGARERDRARYWASE RSIGEFSRIFIFPERVQQSGVTALLDGGILRVHIPKATKDETHGHRIEVD*
Coding	>Hirsu2\|6052 ATGGCGTCTTCTCCGGGGTCTGTTACCTCAAACCCCAGCGTTGCCCATCTTGTGCATCTCCTCCAAGGCATCAAT AAGTATGTTCATGAACTAGGCGGCTTAAACGACAAACAAGGCCATCGTCACCCTGAGGCCGCACATGGCACATTT TACCCTAAATTCGATGTGCGCGAATTGAAAGACGCGTTTGAGCTGTATGGGGAGCTTGCCGGTGTGCAAAAAAAG GATATTATCATTGAGTTTTCCGAGCCCCAGACTCTGGTCGTCCGTGGGTTCATCGAGCGATGTTATTCCACAGCA AAGCCGGCTGAACAAACGGCCCCCGGCAGCTCAGCTACACCGAGCACCAAGGATACTGATCAGGGTAAACAGACG CCACTGACTACTGCCGAAAAGATTCCGAGTCCTGGAGCGCGGGAGCGTGATCGAGCCAGATACTGGGCATCTGAA CGCAGCATCGGCGAGTTTTCACGGATATTTATATTTCCGGAGCGTGTTCAGCAGAGTGGTGTCACGGCCTTGCTC GATGGCGGGATCCTCCGTGTCCATATTCCCAAGGCCACGAAGGATGAGACTCATGGGCATAGAATCGAAGTTGAC TAG
Transcript	>Hirsu2\|6052 ATGGCGTCTTCTCCGGGGTCTGTTACCTCAAACCCCAGCGTTGCCCATCTTGTGCATCTCCTCCAAGGCATCAAT AAGTATGTTCATGAACTAGGCGGCTTAAACGACAAACAAGGCCATCGTCACCCTGAGGCCGCACATGGCACATTT TACCCTAAATTCGATGTGCGCGAATTGAAAGACGCGTTTGAGCTGTATGGGGAGCTTGCCGGTGTGCAAAAAAAG GATATTATCATTGAGTTTTCCGAGCCCCAGACTCTGGTCGTCCGTGGGTTCATCGAGCGATGTTATTCCACAGCA AAGCCGGCTGAACAAACGGCCCCCGGCAGCTCAGCTACACCGAGCACCAAGGATACTGATCAGGGTAAACAGACG CCACTGACTACTGCCGAAAAGATTCCGAGTCCTGGAGCGCGGGAGCGTGATCGAGCCAGATACTGGGCATCTGAA CGCAGCATCGGCGAGTTTTCACGGATATTTATATTTCCGGAGCGTGTTCAGCAGAGTGGTGTCACGGCCTTGCTC GATGGCGGGATCCTCCGTGTCCATATTCCCAAGGCCACGAAGGATGAGACTCATGGGCATAGAATCGAAGTTGAC TAG
Gene	>Hirsu2\|6052 ATGGCGTCTTCTCCGGGGTCTGTTACCTCAAACCCCAGCGTTGCCCATCTTGTGCATCTCCTCCAAGGCATCAAT AAGTATGTTCATGAACTAGGCGGCTTAAACGACAAACAAGGCCATCGTCACCCTGAGGCCGCACATGGCACATTT TACCCTAAATTCGATGTGCGCGAATTGAAAGACGCGTTTGAGCTGTATGGGGAGCTTGCCGGTGTGCAAAAAAAG GATATTATCATTGAGTTTTCCGAGCCCCAGACTCTGGTCGTCCGTGGGTTCATCGAGCGATGTTATTCCACAGCA AAGCCGGCTGAACAAACGGCCCCCGGCAGCTCAGCTACACCGAGCACCAAGGATACTGATCAGGGTAAACAGACG CCACTGACTACTGCCGAAAAGATTCCGAGTCCTGGAGCGCGGGAGCGTGATCGAGCCAGATACTGGGCATCTGAA CGCAGCATCGGCGAGTTTTCACGGATATTTATATTTCCGGAGCGTGTTCAGCAGAGTGGTGTCACGGCCTTGCTC GATGGCGGGATCCTCCGTGTCCATATTCCCAAGGCCACGAAGGATGAGACTCATGGGCATAGAATCGAAGTTGAC TAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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