Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6040
Gene name
LocationContig_305:11135..11662
Strand-
Gene length (bp)527
Transcript length (bp)474
Coding sequence length (bp)474
Protein length (aa) 158

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1486 0.0662 0.934 0.0858 0.0659 0.0105 0.289 0.091 0.1823 0.0043

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.999401

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6198
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1205
Ophiocordyceps australis 1348a (Ghana) OphauG2|4154
Ophiocordyceps australis map64 (Brazil) OphauB2|6417
Ophiocordyceps australis map64 (Brazil) OphauB2|6586
Ophiocordyceps subramaniannii Hirsu2|6040 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6040
MYGHLRIALMALSVLLGLQLCLATPVGPFARTRRIAAVDVTARAQCMVEAERTGSIFEHETPQGKSLLTFSIDWL
LVTFADGRLAFATLQYDPAIVRGDRTPLHPKGAAPNANANIWAQKQAGPGAVQKATEKADEYANHPAVPKGKGTK
VDTGSFS*
Coding >Hirsu2|6040
ATGTATGGACACCTGCGCATCGCCTTGATGGCCCTCTCGGTCCTTCTTGGCCTCCAGCTTTGCCTTGCGACCCCC
GTGGGTCCTTTTGCGCGGACCCGGAGGATCGCCGCCGTCGACGTCACAGCAAGGGCCCAGTGCATGGTCGAAGCA
GAGCGGACCGGGAGCATCTTCGAGCACGAAACCCCCCAAGGTAAGTCACTCCTCACCTTCAGCATCGACTGGCTC
CTCGTCACTTTTGCTGACGGGCGGCTTGCGTTCGCGACTCTGCAGTACGACCCAGCAATCGTCAGGGGAGACCGT
ACTCCTCTTCACCCGAAGGGCGCCGCACCGAATGCCAATGCCAATATTTGGGCCCAGAAACAGGCCGGCCCCGGG
GCTGTGCAGAAGGCGACAGAGAAAGCCGATGAATATGCGAATCATCCTGCCGTTCCGAAAGGGAAGGGAACGAAG
GTGGACACCGGAAGCTTCAGTTAA
Transcript >Hirsu2|6040
ATGTATGGACACCTGCGCATCGCCTTGATGGCCCTCTCGGTCCTTCTTGGCCTCCAGCTTTGCCTTGCGACCCCC
GTGGGTCCTTTTGCGCGGACCCGGAGGATCGCCGCCGTCGACGTCACAGCAAGGGCCCAGTGCATGGTCGAAGCA
GAGCGGACCGGGAGCATCTTCGAGCACGAAACCCCCCAAGGTAAGTCACTCCTCACCTTCAGCATCGACTGGCTC
CTCGTCACTTTTGCTGACGGGCGGCTTGCGTTCGCGACTCTGCAGTACGACCCAGCAATCGTCAGGGGAGACCGT
ACTCCTCTTCACCCGAAGGGCGCCGCACCGAATGCCAATGCCAATATTTGGGCCCAGAAACAGGCCGGCCCCGGG
GCTGTGCAGAAGGCGACAGAGAAAGCCGATGAATATGCGAATCATCCTGCCGTTCCGAAAGGGAAGGGAACGAAG
GTGGACACCGGAAGCTTCAGTTAA
Gene >Hirsu2|6040
ATGTATGGACACCTGCGCATCGCCTTGATGGCCCTCTCGGTCCTTCTTGGCCTCCAGCTTTGCCTTGCGACCCCC
GTGGGTCCTTTTGGTAAAGGAGGATTCCCGTCGACCTCGCGGATCCCATCGACTTCGGGACCGCAGCGCGGACCC
GGAGGATCGCCGCCGTCGACGTCACAGCAAGGGCCCAGTGCATGGTCGAAGCAGAGCGGACCGGGAGCATCTTCG
AGCACGAAACCCCCCAAGGTAAGTCACTCCTCACCTTCAGCATCGACTGGCTCCTCGTCACTTTTGCTGACGGGC
GGCTTGCGTTCGCGACTCTGCAGTACGACCCAGCAATCGTCAGGGGAGACCGTACTCCTCTTCACCCGAAGGGCG
CCGCACCGAATGCCAATGCCAATATTTGGGCCCAGAAACAGGCCGGCCCCGGGGCTGTGCAGAAGGCGACAGAGA
AAGCCGATGAATATGCGAATCATCCTGCCGTTCCGAAAGGGAAGGGAACGAAGGTGGACACCGGAAGCTTCAGTT
AA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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