Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6009
Gene name
LocationContig_303:13499..14176
Strand+
Gene length (bp)677
Transcript length (bp)513
Coding sequence length (bp)513
Protein length (aa) 171

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 53 75 22
3 88 110 22
4 125 147 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6009
MEKREQAGYAYVVPVTPRGIWSSQLYLHGTSTVFSLVLIGLGAKLVNIPGGIIILVPPAGLAFLWNLGALAALFI
RLNRRGIHPGIRVGVDLFFWLGFGAVSILMAATWSTWSLNMPKERDGSELLVFVKAAVIFAILEAVIHIALFIVD
CYQTHVENRTKKLIRLASKE*
Coding >Hirsu2|6009
ATGGAGAAGCGTGAACAGGCTGGCTACGCCTATGTCGTCCCCGTGACGCCGCGAGGCATATGGTCCTCCCAACTG
TACCTCCACGGTACCTCGACCGTCTTCTCTCTGGTCCTCATAGGGCTCGGTGCCAAACTGGTCAACATACCAGGA
GGAATCATCATACTTGTTCCCCCGGCCGGCCTCGCTTTCCTCTGGAACCTGGGTGCCTTGGCGGCCTTGTTCATT
CGACTCAACCGTCGAGGAATCCATCCCGGCATCCGCGTCGGCGTGGACCTCTTCTTCTGGCTCGGCTTCGGCGCC
GTCTCTATTCTGATGGCGGCCACGTGGTCCACGTGGAGTTTGAACATGCCGAAAGAGCGAGATGGCTCCGAGCTT
CTCGTCTTCGTCAAGGCGGCTGTCATCTTCGCAATCCTGGAAGCCGTCATACACATCGCTCTCTTTATCGTAGAC
TGTTACCAGACGCACGTCGAGAATCGAACGAAGAAGCTGATCCGGCTGGCGAGCAAAGAGTGA
Transcript >Hirsu2|6009
ATGGAGAAGCGTGAACAGGCTGGCTACGCCTATGTCGTCCCCGTGACGCCGCGAGGCATATGGTCCTCCCAACTG
TACCTCCACGGTACCTCGACCGTCTTCTCTCTGGTCCTCATAGGGCTCGGTGCCAAACTGGTCAACATACCAGGA
GGAATCATCATACTTGTTCCCCCGGCCGGCCTCGCTTTCCTCTGGAACCTGGGTGCCTTGGCGGCCTTGTTCATT
CGACTCAACCGTCGAGGAATCCATCCCGGCATCCGCGTCGGCGTGGACCTCTTCTTCTGGCTCGGCTTCGGCGCC
GTCTCTATTCTGATGGCGGCCACGTGGTCCACGTGGAGTTTGAACATGCCGAAAGAGCGAGATGGCTCCGAGCTT
CTCGTCTTCGTCAAGGCGGCTGTCATCTTCGCAATCCTGGAAGCCGTCATACACATCGCTCTCTTTATCGTAGAC
TGTTACCAGACGCACGTCGAGAATCGAACGAAGAAGCTGATCCGGCTGGCGAGCAAAGAGTGA
Gene >Hirsu2|6009
ATGGAGAAGCGTGAACAGGCTGGCTACGCCTATGTCGTCCCCGTGACGCCGCGAGGCATATGGTCCTCCCAACTG
TACCTCCACGGTACCTCGACCGTCTTCTCTCTGGTCCTCATAGGGCTCGGTGCCAAACTGGTCAACATACCAGGA
GGAATCATCATACTTGTTCCCCCGGTGAGTCAACACCTCTCTCAGTCTCAGACAGCGACAACCCTGTTCCGACCT
CACATCCGTTGGTGCTGACCACGTTGGGGCATGCATCAGGCCGGCCTCGCTTTCCTCTGGAACCTGGGTGCCTTG
GCGGCCTTGTTCATTCGACTCAACCGTCGAGGAATCCATCCCGGCATCCGCGTCGGCGTGGACCTCTTCTTCTGG
CTCGGCTTCGGCGCCGTCTCTATTCTGATGGCGGCCACGTGGTCCACGTGGAGTTTGAACATGCCGAAAGAGCGA
GATGGCTCCGAGCTTCTCGTCTTCGTCAAGGCGGCTGTCATCTTCGCAATCCTGGAAGCGTAAGCCCCTTGCATC
CCCCCCTCTCTCCTGCAAAACTCATTGACTGGACTGACCATTGACATCTTCGGCACAGCGTCATACACATCGCTC
TCTTTATCGTAGACTGTTACCAGACGCACGTCGAGAATCGAACGAAGAAGCTGATCCGGCTGGCGAGCAAAGAGT
GA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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