Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6008
Gene name
LocationContig_303:11904..12456
Strand-
Gene length (bp)552
Transcript length (bp)492
Coding sequence length (bp)492
Protein length (aa) 164

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.5

Transmembrane Domains

Domain # Start End Length
1 12 30 18
2 45 67 22
3 74 96 22
4 116 138 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6008
MDFRVVGAGHAVLALLLLVELGLISHAVRIQSSSAELEPLSSINFMLFNTVWSILALAFVAVIPLVVSYAYHNII
ALFVLAATAAFWLAGSIAVAAVLGTIGQQRKNIYSFTQPIVAFSFFIWALFTVLTSMEVLGLLKTAYYQHELSNP
IELQRQRGSQADE*
Coding >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC
GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC
GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC
ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG
TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC
ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Transcript >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC
GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC
GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC
ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG
TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC
ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Gene >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGGTAAGTGAGGATGCGCTCTCGATCGCCCTGTTCCTCGGCCTTGACGTCTGTGGATCCTAGCCGTCCGCATT
CAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACCGTCTGGTCCATTCTG
GCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATCGCCCTCTTCGTCCTC
GCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACCATCGGTCAGCAGCGA
AAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTGTTCACAGTCTTGACG
TCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCCATAGAACTACAACGC
CAACGCGGCTCGCAGGCTGACGAATAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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