Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6008
Gene name
Location	Contig_303:11904..12456
Strand	-
Gene length (bp)	552
Transcript length (bp)	492
Coding sequence length (bp)	492
Protein length (aa)	164

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 28	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	12	30	18
2	45	67	22
3	74	96	22
4	116	138	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6008 MDFRVVGAGHAVLALLLLVELGLISHAVRIQSSSAELEPLSSINFMLFNTVWSILALAFVAVIPLVVSYAYHNII ALFVLAATAAFWLAGSIAVAAVLGTIGQQRKNIYSFTQPIVAFSFFIWALFTVLTSMEVLGLLKTAYYQHELSNP IELQRQRGSQADE*
Coding	>Hirsu2\|6008 ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Transcript	>Hirsu2\|6008 ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Gene	>Hirsu2\|6008 ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC CATGGTAAGTGAGGATGCGCTCTCGATCGCCCTGTTCCTCGGCCTTGACGTCTGTGGATCCTAGCCGTCCGCATT CAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACCGTCTGGTCCATTCTG GCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATCGCCCTCTTCGTCCTC GCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACCATCGGTCAGCAGCGA AAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTGTTCACAGTCTTGACG TCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCCATAGAACTACAACGC CAACGCGGCTCGCAGGCTGACGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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