Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6008
Gene name
LocationContig_303:11904..12456
Strand-
Gene length (bp)552
Transcript length (bp)492
Coding sequence length (bp)492
Protein length (aa) 164

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.1565 0.127 0.2025 0.5301 0.0577 0.0031 0.2519 0.82 0.4616 0.0023

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 12 30 18
2 45 67 22
3 74 96 22
4 116 138 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup559
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3026
Ophiocordyceps australis map64 (Brazil) OphauB2|6824
Ophiocordyceps australis map64 (Brazil) OphauB2|8046
Ophiocordyceps camponoti-floridani Ophcf2|00047
Ophiocordyceps camponoti-rufipedis Ophun1|5212
Ophiocordyceps kimflemingae Ophio5|2553
Ophiocordyceps subramaniannii Hirsu2|4687
Ophiocordyceps subramaniannii Hirsu2|6008 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6008
MDFRVVGAGHAVLALLLLVELGLISHAVRIQSSSAELEPLSSINFMLFNTVWSILALAFVAVIPLVVSYAYHNII
ALFVLAATAAFWLAGSIAVAAVLGTIGQQRKNIYSFTQPIVAFSFFIWALFTVLTSMEVLGLLKTAYYQHELSNP
IELQRQRGSQADE*
Coding >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC
GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC
GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC
ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG
TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC
ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Transcript >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGCCGTCCGCATTCAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACC
GTCTGGTCCATTCTGGCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATC
GCCCTCTTCGTCCTCGCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACC
ATCGGTCAGCAGCGAAAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTG
TTCACAGTCTTGACGTCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCC
ATAGAACTACAACGCCAACGCGGCTCGCAGGCTGACGAATAA
Gene >Hirsu2|6008
ATGGATTTTCGCGTCGTCGGCGCCGGCCACGCCGTCCTCGCCCTACTGCTCCTGGTTGAGCTGGGCCTTATCAGC
CATGGTAAGTGAGGATGCGCTCTCGATCGCCCTGTTCCTCGGCCTTGACGTCTGTGGATCCTAGCCGTCCGCATT
CAAAGCTCAAGTGCCGAACTCGAGCCCTTGTCCTCGATCAACTTCATGCTCTTCAACACCGTCTGGTCCATTCTG
GCTCTGGCCTTCGTCGCCGTCATTCCTCTCGTCGTTTCCTACGCCTACCATAACATCATCGCCCTCTTCGTCCTC
GCCGCCACGGCCGCCTTCTGGCTTGCCGGGTCCATCGCGGTCGCCGCCGTCCTCGGCACCATCGGTCAGCAGCGA
AAGAACATCTACTCCTTCACGCAGCCAATAGTCGCCTTTAGCTTCTTCATCTGGGCCTTGTTCACAGTCTTGACG
TCCATGGAGGTGCTTGGCCTGCTGAAGACGGCCTACTATCAACACGAATTGTCCAACCCCATAGAACTACAACGC
CAACGCGGCTCGCAGGCTGACGAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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