© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|6005 |
| Gene name | |
| Location | Contig_303:1235..1879 |
| Strand | + |
| Gene length (bp) | 644 |
| Transcript length (bp) | 435 |
| Coding sequence length (bp) | 435 |
| Protein length (aa) | 145 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.0772 | 0.0525 | 0.9515 | 0.0485 | 0.0857 | 0.0076 | 0.099 | 0.1879 | 0.0722 | 0.0052 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.999758 |
| Orthofinder run ID | 4 |
| Orthogroup | 7076 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps camponoti-floridani | Ophcf2|06556 |
| Ophiocordyceps kimflemingae | Ophio5|809 |
| Ophiocordyceps subramaniannii | Hirsu2|6005 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|6005 MVRLTAFVTLGLATLAASQKKGETHYHGQITCETLRNNQQPLPNFSGILYSETNYRGEARNITIDDRGQCLNLFE PVREGFNNRASRSIRIGCPAYDHCTVYQHENCIGSERTYERDTPEVKAKRGIVSIKCRWFHRVKLSHST* |
| Coding | >Hirsu2|6005 ATGGTGCGCTTGACTGCATTTGTTACTCTTGGCCTGGCCACCCTGGCGGCCAGTCAGAAGAAGGGCGAGACGCAT TACCATGGACAGATCACGTGCGAGACGCTGAGAAACAATCAGCAGCCTTTGCCCAACTTTTCGGGCATCCTCTAC AGCGAGACCAACTACAGGGGCGAGGCCAGAAACATTACCATCGATGACCGGGGACAGTGCCTCAACCTGTTTGAG CCCGTCCGTGAGGGCTTTAACAACCGCGCGAGCCGCTCCATCCGCATCGGATGTCCCGCCTACGACCATTGCACC GTTTACCAGCATGAAAACTGCATTGGCTCTGAGCGAACCTACGAGCGCGACACACCCGAGGTGAAGGCTAAAAGA GGAATCGTGTCCATCAAGTGCCGGTGGTTCCACAGAGTCAAGTTGTCGCATTCTACATAA |
| Transcript | >Hirsu2|6005 ATGGTGCGCTTGACTGCATTTGTTACTCTTGGCCTGGCCACCCTGGCGGCCAGTCAGAAGAAGGGCGAGACGCAT TACCATGGACAGATCACGTGCGAGACGCTGAGAAACAATCAGCAGCCTTTGCCCAACTTTTCGGGCATCCTCTAC AGCGAGACCAACTACAGGGGCGAGGCCAGAAACATTACCATCGATGACCGGGGACAGTGCCTCAACCTGTTTGAG CCCGTCCGTGAGGGCTTTAACAACCGCGCGAGCCGCTCCATCCGCATCGGATGTCCCGCCTACGACCATTGCACC GTTTACCAGCATGAAAACTGCATTGGCTCTGAGCGAACCTACGAGCGCGACACACCCGAGGTGAAGGCTAAAAGA GGAATCGTGTCCATCAAGTGCCGGTGGTTCCACAGAGTCAAGTTGTCGCATTCTACATAA |
| Gene | >Hirsu2|6005 ATGGTGCGCTTGACTGCATTTGTTACTCTTGGCCTGGCCACCCTGGCGGCCAGTCAGAAGAAGGGCGAGACGCAT TACCATGGACAGATCACGTGCGAGACGCTGAGAAACAATCAGCAGCCTTTGCCCAACTTTTCGGTATACCCAATC TTCATCGCAAGTCCAGTCCCAGCGCACCACCTAATGACAGGAAACAGGGCATCCTCTACAGCGAGACCAACTACA GGGGCGAGGCCAGAAACATTACCATCGATGACCGGGGACAGTGCCTCAACCTGTTTGAGCCCGTGTAAGTTTTGA CTTGAGCGTACTAGTGAATACTGGACCAGACTTTGGAACTCTTGCGCCCAAGACGCTGACAAGAATCCAAGCCGT GAGGGCTTTAACAACCGCGCGAGCCGCTCCATCCGCATCGGATGTCCCGCCTACGACCATTGCACCGTTTACCAG TGCGTCTTTCTCTCCCCCTTTTCTCTGTATTAGGCACGGAAATGGCTGCTGACCTGAAGCTTAACAGGCATGAAA ACTGCATTGGCTCTGAGCGAACCTACGAGCGCGACACACCCGAGGTGAAGGCTAAAAGAGGAATCGTGTCCATCA AGTGCCGGTGGTTCCACAGAGTCAAGTTGTCGCATTCTACATAA |