Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|6001
Gene name
LocationContig_3022:62..1450
Strand+
Gene length (bp)1388
Transcript length (bp)1260
Coding sequence length (bp)1260
Protein length (aa) 420

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00999 Na_H_Exchanger Sodium/hydrogen exchanger family 2.3E-16 135 304

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O42701|NAH2_ZYGRO Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 133 316 2.0E-31
sp|Q99173|NAH1_ZYGRO Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 133 380 2.0E-30
sp|Q99271|NAH1_YEAST Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 133 309 1.0E-28
sp|O14123|NAH2_SCHPO Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 130 309 7.0E-27
sp|P36606|NAH_SCHPO Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 133 337 1.0E-21

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0006812 cation transport Yes
GO:0055085 transmembrane transport Yes
GO:0015299 solute:proton antiporter activity Yes
GO:0008324 cation transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0015298 solute:cation antiporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0051234 establishment of localization No
GO:0022804 active transmembrane transporter activity No
GO:0015077 monovalent inorganic cation transmembrane transporter activity No
GO:0015078 proton transmembrane transporter activity No
GO:0051179 localization No
GO:0044425 membrane part No
GO:0031224 intrinsic component of membrane No
GO:0006811 ion transport No
GO:0015291 secondary active transmembrane transporter activity No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0015297 antiporter activity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 174 191 17
2 206 225 19
3 238 260 22
4 284 306 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|6001
MAAMWLATSGLVWAVARPAGGLLHALAVGACVTPTDPVLSAVIVKGKFADGNIPRDLQDLIVADSRRPLTAPAPA
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLVGTCGLLGTDDVLACFIAG
NTFTWDDWFRLRTKDDSLQPTIDMLLNVAIFLWYGASLPWADFARNDVPRLDTGRLVLLGLLVLLLRRLPWVFAM
HRWIHQIRQVRQAVFVGFFGPIGVSAVFYLFLSLRFIDDHLTGDDGVPRPDVEHLGDTIRVIVWFLVVCSIVVHG
LSIPLGKLGYLAPRTFGLVRADSLSEEPLTGRSRTRSIFGRWLGRKSNGHGPALPAHLGRDGVPPGAWDVGSEAS
ASCPAPDGILPPSSVGHGDVGPTTGTPPRREIRLPDESHVAGRL*
Coding >Hirsu2|6001
ATGGCCGCCATGTGGCTGGCGACGAGCGGGCTGGTGTGGGCCGTGGCCCGGCCGGCCGGCGGGCTGCTGCATGCG
CTGGCCGTCGGCGCCTGCGTCACGCCGACGGACCCGGTGCTGTCGGCCGTCATCGTCAAGGGCAAGTTCGCCGAC
GGCAACATCCCGCGCGACCTGCAGGACCTCATCGTGGCCGATTCACGGCGGCCGCTGACGGCGCCGGCGCCGGCG
GCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTCCTCGTCGGCACCTGCGGCCTGCTCGGCACCGACGACGTCCTCGCCTGCTTCATCGCCGGC
AACACCTTCACCTGGGACGACTGGTTCCGCCTGCGCACCAAGGACGACTCGCTGCAGCCCACCATCGACATGCTG
CTCAACGTCGCCATCTTCCTCTGGTATGGCGCCTCCCTGCCCTGGGCCGACTTCGCCCGCAACGACGTCCCGCGC
CTCGACACCGGCCGCCTCGTCCTCCTCGGCCTGCTCGTCCTGCTGCTGCGCCGCCTGCCCTGGGTCTTCGCCATG
CACCGCTGGATTCACCAGATCCGCCAGGTCCGCCAGGCCGTCTTCGTCGGCTTCTTCGGCCCCATCGGCGTCTCC
GCCGTCTTCTACCTCTTCCTCAGCCTCCGCTTCATCGACGACCACCTGACCGGCGACGACGGCGTCCCCAGGCCC
GACGTCGAGCACCTCGGCGACACCATCCGCGTCATCGTCTGGTTCTTGGTCGTCTGCAGCATCGTCGTCCACGGG
CTCAGCATCCCGCTCGGCAAACTCGGTTACCTTGCGCCCCGCACCTTCGGCCTCGTCAGGGCCGACAGCTTGAGC
GAGGAGCCGCTGACGGGCCGCTCGCGCACGAGGTCCATCTTCGGGAGGTGGCTCGGCCGCAAGAGCAACGGCCAC
GGACCTGCCCTGCCGGCCCACCTCGGCCGAGACGGCGTCCCGCCCGGCGCTTGGGACGTCGGCTCCGAGGCGAGC
GCCTCTTGTCCCGCGCCGGACGGCATTCTCCCGCCCAGCTCCGTCGGTCACGGGGATGTCGGTCCGACGACGGGG
ACGCCACCCCGGCGCGAGATACGGCTTCCAGATGAATCGCACGTGGCGGGCCGTCTCTGA
Transcript >Hirsu2|6001
ATGGCCGCCATGTGGCTGGCGACGAGCGGGCTGGTGTGGGCCGTGGCCCGGCCGGCCGGCGGGCTGCTGCATGCG
CTGGCCGTCGGCGCCTGCGTCACGCCGACGGACCCGGTGCTGTCGGCCGTCATCGTCAAGGGCAAGTTCGCCGAC
GGCAACATCCCGCGCGACCTGCAGGACCTCATCGTGGCCGATTCACGGCGGCCGCTGACGGCGCCGGCGCCGGCG
GCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTTCCTCGTCGGCACCTGCGGCCTGCTCGGCACCGACGACGTCCTCGCCTGCTTCATCGCCGGC
AACACCTTCACCTGGGACGACTGGTTCCGCCTGCGCACCAAGGACGACTCGCTGCAGCCCACCATCGACATGCTG
CTCAACGTCGCCATCTTCCTCTGGTATGGCGCCTCCCTGCCCTGGGCCGACTTCGCCCGCAACGACGTCCCGCGC
CTCGACACCGGCCGCCTCGTCCTCCTCGGCCTGCTCGTCCTGCTGCTGCGCCGCCTGCCCTGGGTCTTCGCCATG
CACCGCTGGATTCACCAGATCCGCCAGGTCCGCCAGGCCGTCTTCGTCGGCTTCTTCGGCCCCATCGGCGTCTCC
GCCGTCTTCTACCTCTTCCTCAGCCTCCGCTTCATCGACGACCACCTGACCGGCGACGACGGCGTCCCCAGGCCC
GACGTCGAGCACCTCGGCGACACCATCCGCGTCATCGTCTGGTTCTTGGTCGTCTGCAGCATCGTCGTCCACGGG
CTCAGCATCCCGCTCGGCAAACTCGGTTACCTTGCGCCCCGCACCTTCGGCCTCGTCAGGGCCGACAGCTTGAGC
GAGGAGCCGCTGACGGGCCGCTCGCGCACGAGGTCCATCTTCGGGAGGTGGCTCGGCCGCAAGAGCAACGGCCAC
GGACCTGCCCTGCCGGCCCACCTCGGCCGAGACGGCGTCCCGCCCGGCGCTTGGGACGTCGGCTCCGAGGCGAGC
GCCTCTTGTCCCGCGCCGGACGGCATTCTCCCGCCCAGCTCCGTCGGTCACGGGGATGTCGGTCCGACGACGGGG
ACGCCACCCCGGCGCGAGATACGGCTTCCAGATGAATCGCACGTGGCGGGCCGTCTCTGA
Gene >Hirsu2|6001
ATGGCCGCCATGTGGCTGGCGACGAGCGGGCTGGTGTGGGCCGTGGCCCGGCCGGCCGGCGGGCTGCTGCATGCG
CTGGCCGTCGGCGCCTGCGTCACGCCGACGGACCCGGTGCTGTCGGCCGTCATCGTCAAGGGCAAGTTCGCCGAC
GGCAACATCCCGCGCGACCTGCAGGACCTCATCGTGGCCGAGTCCGGCACCAACGACGGGCTCGGCTACCCCTTC
CTCTTCTTCGCCCTCTACCTCATCAAGTTCACGGCGGCCGCTGACGGCGCCGGCGCCGGCGGCGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
CCTCGTCGGCACCTGCGGCCTGCTCGGCACCGACGACGTCCTCGCCTGCTTCATCGCCGGCAACACCTTCACCTG
GGACGACTGGTTCCGCCTGCGCACCAAGGACGACTCGCTGCAGCCCACCATCGACATGCTGCTCAACGTCGCCAT
CTTCCTCTGGTATGGCGCCTCCCTGCCCTGGGCCGACTTCGCCCGCAACGACGTCCCGCGCCTCGACACCGGCCG
CCTCGTCCTCCTCGGCCTGCTCGTCCTGCTGCTGCGCCGCCTGCCCTGGGTCTTCGCCATGCACCGCTGGATTCA
CCAGATCCGCCAGGTCCGCCAGGCCGTCTTCGTCGGCTTCTTCGGCCCCATCGGCGTCTCCGCCGTCTTCTACCT
CTTCCTCAGCCTCCGCTTCATCGACGACCACCTGACCGGCGACGACGGCGTCCCCAGGCCCGACGTCGAGCACCT
CGGCGACACCATCCGCGTCATCGTCTGGTTCTTGGTCGTCTGCAGCATCGTGAGTCGGCTGCCGCCCGTTACCCT
CCTTCTGCCCAGCCGGTCCTGACCTTTCCACGCTTGCGCAGGTCGTCCACGGGCTCAGCATCCCGCTCGGCAAAC
TCGGTTACCTTGCGCCCCGCACCTTCGGCCTCGTCAGGGCCGACAGCTTGAGCGAGGAGCCGCTGACGGGCCGCT
CGCGCACGAGGTCCATCTTCGGGAGGTGGCTCGGCCGCAAGAGCAACGGCCACGGACCTGCCCTGCCGGCCCACC
TCGGCCGAGACGGCGTCCCGCCCGGCGCTTGGGACGTCGGCTCCGAGGCGAGCGCCTCTTGTCCCGCGCCGGACG
GCATTCTCCCGCCCAGCTCCGTCGGTCACGGGGATGTCGGTCCGACGACGGGGACGCCACCCCGGCGCGAGATAC
GGCTTCCAGATGAATCGCACGTGGCGGGCCGTCTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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