Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|6000
Gene name
Location	Contig_3020:311..877
Strand	+
Gene length (bp)	566
Transcript length (bp)	498
Coding sequence length (bp)	498
Protein length (aa)	166

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	7	26	19
2	60	82	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|6000 MDLDVSLLYLITFFGIACLALILWTLKLLIRNPAIYYARYVRYPLLVNFRWLRATRLQSVMFIVFLLINFGAILI PSFFPGWRQVQTRAASMAIVNTAPLCMGGRAPVVDALNIPRNWYLMLHSWIGVVAITEAATHSIIALSLRPRSGS LTQTGWAAHLSPLFR*
Coding	>Hirsu2\|6000 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCCAATCAGTGATGTTCATAGTCTTCCTCCTCATTAACTTTGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTCAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTGTTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGCGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCCTAAGGCCAAGATCAGGATCT TTGACCCAGACTGGCTGGGCCGCGCACCTCTCACCGCTTTTCCGCTGA
Transcript	>Hirsu2\|6000 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCCAATCAGTGATGTTCATAGTCTTCCTCCTCATTAACTTTGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTCAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTGTTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGCGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCCTAAGGCCAAGATCAGGATCT TTGACCCAGACTGGCTGGGCCGCGCACCTCTCACCGCTTTTCCGCTGA
Gene	>Hirsu2\|6000 ATGGACCTTGATGTGAGCTTGCTGTACCTCATTACCTTCTTTGGCATTGCCTGTCTAGCTCTGATCCTTTGGACA CTTAAACTTCTGATTCGCAACCCAGCAATCTACTATGCCAGATACGTTCGGTACCCTCTCCTGGTCAACTTCAGG TGGCTACGCGCGACCCGCCTCCAATCAGTGATGTTCATAGTCTTCCTCCTCATTAACTTTGGCGCTATTCTCATA CCTTCGTTCTTCCCCGGATGGAGGCAGGTTCAAACGAGAGCAGCCTCAATGGCTATCGTGAATACCGCCCCTCTC TGCATGGGTGGTCGGGCGCCTGTTGTCGACGCATTGAATATTCCACGCAACTGGTATCTTATGCTACACTCCTGG ATCGGCGTGGTTGCTATCACGGAAGCTGCCACACATTCCATTATTGCTCTGAGCCTAAGGCCAAGATCAGGATCT TTGACCCAGACTGGCTGGGCCGTAAGTTATTTGTCTAGCGCCCTTGACACCTTCTTGCTAAAATTTGAAGTCTTT TGGTTTAATATTAGGCGCACCTCTCACCGCTTTTCCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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