Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|60
Gene name
LocationContig_1006:973..2623
Strand+
Gene length (bp)1650
Transcript length (bp)1650
Coding sequence length (bp)1650
Protein length (aa) 550

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12002 MgsA_C MgsA AAA+ ATPase C terminal 1.4E-61 380 537
PF16193 AAA_assoc_2 AAA C-terminal domain 2.5E-22 310 379
PF00004 AAA ATPase family associated with various cellular activities (AAA) 1.4E-13 171 278
PF05496 RuvB_N Holliday junction DNA helicase RuvB P-loop domain 9.1E-08 139 257

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O13984|WRIP1_SCHPO ATPase WRNIP1 homolog C26H5.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.02c PE=3 SV=2 3 530 1.0E-161
sp|P40151|WRIP1_YEAST DNA-dependent ATPase MGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGS1 PE=1 SV=2 3 548 3.0E-127
sp|Q8CG07|WRIP1_RAT ATPase WRNIP1 OS=Rattus norvegicus GN=Wrnip1 PE=1 SV=1 114 532 2.0E-123
sp|Q91XU0|WRIP1_MOUSE ATPase WRNIP1 OS=Mus musculus GN=Wrnip1 PE=1 SV=2 114 532 2.0E-123
sp|Q75JU2|WRIP1_DICDI ATPase WRNIP1 OS=Dictyostelium discoideum GN=wrnip1 PE=3 SV=1 128 532 4.0E-107
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O13984|WRIP1_SCHPO ATPase WRNIP1 homolog C26H5.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.02c PE=3 SV=2 3 530 1.0E-161
sp|P40151|WRIP1_YEAST DNA-dependent ATPase MGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGS1 PE=1 SV=2 3 548 3.0E-127
sp|Q8CG07|WRIP1_RAT ATPase WRNIP1 OS=Rattus norvegicus GN=Wrnip1 PE=1 SV=1 114 532 2.0E-123
sp|Q91XU0|WRIP1_MOUSE ATPase WRNIP1 OS=Mus musculus GN=Wrnip1 PE=1 SV=2 114 532 2.0E-123
sp|Q75JU2|WRIP1_DICDI ATPase WRNIP1 OS=Dictyostelium discoideum GN=wrnip1 PE=3 SV=1 128 532 4.0E-107
sp|P39918|RARA_COXBU Replication-associated recombination protein A OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=rarA PE=3 SV=3 134 538 3.0E-103
sp|P45262|RARA_HAEIN Replication-associated recombination protein A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rarA PE=3 SV=1 134 538 8.0E-99
sp|P0AAZ4|RARA_ECOLI Replication-associated recombination protein A OS=Escherichia coli (strain K12) GN=rarA PE=1 SV=1 134 537 4.0E-95
sp|P0AAZ5|RARA_ECOL6 Replication-associated recombination protein A OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rarA PE=3 SV=1 134 537 4.0E-95
sp|P0AAZ6|RARA_ECO57 Replication-associated recombination protein A OS=Escherichia coli O157:H7 GN=rarA PE=3 SV=1 134 537 4.0E-95
sp|Q9WYX8|Y508_THEMA Uncharacterized protein TM_0508 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0508 PE=3 SV=1 134 537 5.0E-89
sp|P9WQN1|Y2559_MYCTU Uncharacterized AAA domain-containing protein Rv2559c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2559c PE=1 SV=1 133 537 6.0E-88
sp|P9WQN0|Y2559_MYCTO Uncharacterized AAA domain-containing protein MT2636 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2636 PE=3 SV=1 133 537 6.0E-88
sp|O34528|YRVN_BACSU Uncharacterized AAA domain-containing protein YrvN OS=Bacillus subtilis (strain 168) GN=yrvN PE=3 SV=1 134 535 8.0E-87
sp|O26343|RFCS_METTH Replication factor C small subunit OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=rfcS PE=1 SV=1 133 339 2.0E-14
sp|Q2NH89|RFCS_METST Replication factor C small subunit OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=rfcS PE=3 SV=1 134 334 3.0E-14
sp|Q6YZ54|RFC3_ORYSJ Replication factor C subunit 3 OS=Oryza sativa subsp. japonica GN=RFC3 PE=2 SV=1 131 334 3.0E-14
sp|Q9CAQ8|RFC5_ARATH Replication factor C subunit 5 OS=Arabidopsis thaliana GN=RFC5 PE=1 SV=1 131 334 2.0E-13
sp|Q89A95|DPO3X_BUCBP DNA polymerase III subunit gamma OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=dnaX PE=3 SV=1 135 354 4.0E-13
sp|A3DNV9|RFCS_STAMF Replication factor C small subunit OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) GN=rfcS PE=3 SV=1 136 347 4.0E-13
sp|O74111|RFC3_BLAAD Replication factor C subunit 3 OS=Blastobotrys adeninivorans GN=RFC3 PE=3 SV=1 128 396 1.0E-12
sp|O14003|RFC3_SCHPO Replication factor C subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rfc3 PE=1 SV=2 129 382 2.0E-12
sp|Q99J62|RFC4_MOUSE Replication factor C subunit 4 OS=Mus musculus GN=Rfc4 PE=1 SV=1 115 350 2.0E-12
sp|P38629|RFC3_YEAST Replication factor C subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RFC3 PE=1 SV=1 121 393 2.0E-12
sp|A5UMF3|RFCS_METS3 Replication factor C small subunit OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rfcS PE=3 SV=1 132 338 1.0E-11
sp|Q5UZE5|RFCS_HALMA Replication factor C small subunit OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rfcS PE=3 SV=2 131 336 4.0E-11
sp|Q9D0F6|RFC5_MOUSE Replication factor C subunit 5 OS=Mus musculus GN=Rfc5 PE=1 SV=1 131 334 4.0E-11
sp|P35249|RFC4_HUMAN Replication factor C subunit 4 OS=Homo sapiens GN=RFC4 PE=1 SV=2 119 350 5.0E-11
sp|P09122|DPO3X_BACSU DNA polymerase III subunit gamma/tau OS=Bacillus subtilis (strain 168) GN=dnaX PE=3 SV=3 139 408 9.0E-11
sp|Q58294|RFCL_METJA Replication factor C large subunit OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rfcL PE=1 SV=1 136 338 1.0E-10
sp|P40937|RFC5_HUMAN Replication factor C subunit 5 OS=Homo sapiens GN=RFC5 PE=1 SV=1 131 334 2.0E-10
sp|A0B6D7|RFCL_METTP Replication factor C large subunit OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=rfcL PE=3 SV=1 135 418 2.0E-10
sp|P40348|RFC2_YEAST Replication factor C subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RFC2 PE=1 SV=1 134 397 3.0E-10
sp|Q8K983|DPO3X_BUCAP DNA polymerase III subunit gamma OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=dnaX PE=3 SV=1 135 343 3.0E-10
sp|P75177|DPO3X_MYCPN DNA polymerase III subunit gamma/tau OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=dnaX PE=3 SV=1 135 354 3.0E-10
sp|P53033|RFC2_CHICK Replication factor C subunit 2 OS=Gallus gallus GN=RFC2 PE=2 SV=1 134 441 4.0E-10
sp|P40339|RFC4_YEAST Replication factor C subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RFC4 PE=1 SV=1 134 334 6.0E-10
sp|P47658|DPO3X_MYCGE DNA polymerase III subunit gamma/tau OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=dnaX PE=3 SV=3 135 410 8.0E-10
sp|A3MS27|RFCL_PYRCJ Replication factor C large subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rfcL PE=3 SV=1 134 351 8.0E-10
sp|Q54E21|RFC2_DICDI Probable replication factor C subunit 2 OS=Dictyostelium discoideum GN=rfc2 PE=3 SV=1 134 334 9.0E-10
sp|Q9UXF6|RFCL_SULSO Replication factor C large subunit OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rfcL PE=1 SV=1 138 334 1.0E-09
sp|P74876|DPO3X_SALTY DNA polymerase III subunit tau OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=dnaX PE=3 SV=2 135 395 1.0E-09
sp|C3MVD2|RFCL_SULIM Replication factor C large subunit OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rfcL PE=3 SV=1 138 334 2.0E-09
sp|C3N5N1|RFCL_SULIA Replication factor C large subunit OS=Sulfolobus islandicus (strain M.16.27) GN=rfcL PE=3 SV=1 138 334 2.0E-09
sp|Q05B83|RFC2_BOVIN Replication factor C subunit 2 OS=Bos taurus GN=RFC2 PE=2 SV=1 134 334 2.0E-09
sp|A1RSA3|RFCL_PYRIL Replication factor C large subunit OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=rfcL PE=3 SV=1 132 351 2.0E-09
sp|O94449|RFC4_SCHPO Replication factor C subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rfc4 PE=1 SV=1 134 334 2.0E-09
sp|Q5UP47|RFCS3_MIMIV Putative replication factor C small subunit L499 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L499 PE=3 SV=1 122 334 3.0E-09
sp|Q641W4|RFC2_RAT Replication factor C subunit 2 OS=Rattus norvegicus GN=Rfc2 PE=2 SV=1 134 338 3.0E-09
sp|A6US36|RFCS_METVS Replication factor C small subunit OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rfcS PE=3 SV=1 134 334 3.0E-09
sp|C4KHA7|RFCL_SULIK Replication factor C large subunit OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rfcL PE=3 SV=1 138 334 3.0E-09
sp|Q9WUK4|RFC2_MOUSE Replication factor C subunit 2 OS=Mus musculus GN=Rfc2 PE=1 SV=1 134 338 3.0E-09
sp|P60374|RFCS_NANEQ Replication factor C small subunit OS=Nanoarchaeum equitans (strain Kin4-M) GN=rfcS PE=3 SV=1 137 401 3.0E-09
sp|P35250|RFC2_HUMAN Replication factor C subunit 2 OS=Homo sapiens GN=RFC2 PE=1 SV=3 134 338 4.0E-09
sp|C3NE95|RFCL_SULIY Replication factor C large subunit OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rfcL PE=3 SV=1 138 334 4.0E-09
sp|C3MQ13|RFCL_SULIL Replication factor C large subunit OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rfcL PE=3 SV=1 138 334 4.0E-09
sp|Q9YBS7|RFCS_AERPE Replication factor C small subunit OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rfcS PE=3 SV=3 136 347 5.0E-09
sp|Q6L1I0|RFCS_PICTO Replication factor C small subunit OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rfcS PE=3 SV=1 137 334 5.0E-09
sp|A6UWR5|RFCL_META3 Replication factor C large subunit OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rfcL PE=3 SV=1 135 334 5.0E-09
sp|C3NHF4|RFCL_SULIN Replication factor C large subunit OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rfcL PE=3 SV=1 138 334 9.0E-09
sp|P06710|DPO3X_ECOLI DNA polymerase III subunit tau OS=Escherichia coli (strain K12) GN=dnaX PE=1 SV=1 135 363 1.0E-08
sp|O57853|RFCL_PYRHO Replication factor C large subunit OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=rfcL PE=3 SV=1 133 334 2.0E-08
sp|Q3ISA5|RFCL_NATPD Replication factor C large subunit OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=rfcL PE=3 SV=1 135 334 2.0E-08
sp|Q9UWR2|RFCL_PYRFU Replication factor C large subunit OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rfcL PE=1 SV=1 134 334 2.0E-08
sp|P04526|DPA44_BPT4 Sliding-clamp-loader gp44 subunit OS=Enterobacteria phage T4 GN=44 PE=1 SV=1 129 426 2.0E-08
sp|Q9FXM3|RFC2_ORYSJ Replication factor C subunit 2 OS=Oryza sativa subsp. japonica GN=RFC2 PE=2 SV=1 134 339 2.0E-08
sp|A3MS28|RFCS_PYRCJ Replication factor C small subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rfcS PE=3 SV=1 137 340 3.0E-08
sp|Q5JHP1|RFCL_THEKO Replication factor C large subunit OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rfcL PE=1 SV=1 133 345 4.0E-08
sp|A7GTA2|RUVB_BACCN Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) GN=ruvB PE=3 SV=1 133 373 4.0E-08
sp|Q7XRX1|RFC4_ORYSJ Replication factor C subunit 4 OS=Oryza sativa subsp. japonica GN=RFC4 PE=2 SV=2 118 338 4.0E-08
sp|P53016|RFC4_CAEEL Replication factor C subunit 4 OS=Caenorhabditis elegans GN=rfc-4 PE=1 SV=1 128 415 4.0E-08
sp|A6VJ61|RFCS_METM7 Replication factor C small subunit OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rfcS PE=3 SV=1 134 348 4.0E-08
sp|Q93ZX1|RFC4_ARATH Replication factor C subunit 4 OS=Arabidopsis thaliana GN=RFC4 PE=2 SV=1 130 339 5.0E-08
sp|O28219|RFCS_ARCFU Replication factor C small subunit OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rfcS PE=1 SV=1 136 334 6.0E-08
sp|A4WGV2|RFCS1_PYRAR Replication factor C small subunit 1 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rfcS1 PE=3 SV=1 137 336 9.0E-08
sp|A3CUX9|RFCS_METMJ Replication factor C small subunit OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rfcS PE=3 SV=1 137 341 1.0E-07
sp|A9VIP6|RUVB_BACWK Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus weihenstephanensis (strain KBAB4) GN=ruvB PE=3 SV=1 133 373 1.0E-07
sp|B7HE54|RUVB_BACC4 Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain B4264) GN=ruvB PE=3 SV=1 133 373 1.0E-07
sp|P57553|DPO3X_BUCAI DNA polymerase III subunit gamma OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=dnaX PE=3 SV=1 135 339 1.0E-07
sp|Q4A9R6|RUVB_MYCHJ Holliday junction ATP-dependent DNA helicase RuvB OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=ruvB PE=3 SV=2 139 395 1.0E-07
sp|Q4A7W4|RUVB_MYCH7 Holliday junction ATP-dependent DNA helicase RuvB OS=Mycoplasma hyopneumoniae (strain 7448) GN=ruvB PE=3 SV=2 139 395 1.0E-07
sp|Q600N3|RUVB_MYCH2 Holliday junction ATP-dependent DNA helicase RuvB OS=Mycoplasma hyopneumoniae (strain 232) GN=ruvB PE=3 SV=1 139 395 1.0E-07
sp|A1RSA2|RFCS1_PYRIL Replication factor C small subunit 1 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=rfcS1 PE=3 SV=1 137 336 1.0E-07
sp|A3CTR4|RFCL_METMJ Replication factor C large subunit OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rfcL PE=3 SV=1 137 333 2.0E-07
sp|Q3ITJ2|RFCS_NATPD Replication factor C small subunit OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=rfcS PE=3 SV=1 137 336 2.0E-07
sp|B7IIT2|RUVB_BACC2 Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain G9842) GN=ruvB PE=3 SV=1 139 373 2.0E-07
sp|A1RWU7|RFCS_THEPD Replication factor C small subunit OS=Thermofilum pendens (strain Hrk 5) GN=rfcS PE=3 SV=1 136 357 2.0E-07
sp|Q6HDA6|RUVB_BACHK Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=ruvB PE=3 SV=1 133 373 3.0E-07
sp|Q634C4|RUVB_BACCZ Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain ZK / E33L) GN=ruvB PE=3 SV=1 133 373 3.0E-07
sp|B9IYZ4|RUVB_BACCQ Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain Q1) GN=ruvB PE=3 SV=1 133 373 3.0E-07
sp|P43746|DPO3X_HAEIN DNA polymerase III subunit tau/gamma OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=dnaX PE=3 SV=1 135 342 4.0E-07
sp|Q9V2G3|RFCL_PYRAB Replication factor C large subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=rfcL PE=1 SV=3 133 334 5.0E-07
sp|Q817W4|RUVB_BACCR Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) GN=ruvB PE=3 SV=3 139 373 5.0E-07
sp|P53034|RFC2_DROME Replication factor C subunit 2 OS=Drosophila melanogaster GN=RfC4 PE=2 SV=1 134 334 6.0E-07
sp|Q8ZYK4|RFCS1_PYRAE Replication factor C small subunit 1 OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rfcS1 PE=3 SV=1 137 336 6.0E-07
sp|Q18GQ9|RFCL_HALWD Replication factor C large subunit OS=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) GN=rfcL PE=3 SV=1 135 351 6.0E-07
sp|B7HQH9|RUVB_BACC7 Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain AH187) GN=ruvB PE=3 SV=1 133 373 7.0E-07
sp|P61528|RUVB_BACC1 Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=ruvB PE=3 SV=1 133 373 7.0E-07
sp|A4WGV3|RFCL_PYRAR Replication factor C large subunit OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rfcL PE=3 SV=1 132 351 7.0E-07
sp|Q9HPI4|RFCL_HALSA Replication factor C large subunit OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rfcL PE=3 SV=2 135 350 7.0E-07
sp|B0R601|RFCL_HALS3 Replication factor C large subunit OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rfcL PE=3 SV=1 135 350 7.0E-07
sp|C0R250|RUVB_BRAHW Holliday junction ATP-dependent DNA helicase RuvB OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=ruvB PE=3 SV=1 139 268 7.0E-07
sp|B1YC69|RFCL_PYRNV Replication factor C large subunit OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=rfcL PE=3 SV=1 134 351 8.0E-07
sp|C1ESW4|RUVB_BACC3 Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus cereus (strain 03BB102) GN=ruvB PE=3 SV=1 133 373 8.0E-07
sp|Q977Z9|RFCS_THEVO Replication factor C small subunit OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=rfcS PE=3 SV=2 137 334 8.0E-07
sp|A0RJ26|RUVB_BACAH Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus thuringiensis (strain Al Hakam) GN=ruvB PE=3 SV=1 133 373 9.0E-07
sp|Q6M0E9|RFCL_METMP Replication factor C large subunit OS=Methanococcus maripaludis (strain S2 / LL) GN=rfcL PE=3 SV=1 136 351 1.0E-06
sp|Q2FQT9|RFCS_METHJ Replication factor C small subunit OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=rfcS PE=3 SV=1 133 334 1.0E-06
sp|Q9A3G8|RUVB_CAUCR Holliday junction ATP-dependent DNA helicase RuvB OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=ruvB PE=3 SV=1 133 353 1.0E-06
sp|B8H454|RUVB_CAUCN Holliday junction ATP-dependent DNA helicase RuvB OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=ruvB PE=3 SV=1 133 353 1.0E-06
sp|Q81LG9|RUVB_BACAN Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus anthracis GN=ruvB PE=3 SV=1 133 373 1.0E-06
sp|C3L6U9|RUVB_BACAC Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=ruvB PE=3 SV=1 133 373 1.0E-06
sp|C3P9A7|RUVB_BACAA Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus anthracis (strain A0248) GN=ruvB PE=3 SV=1 133 373 1.0E-06
sp|A1RV38|RFCS2_PYRIL Replication factor C small subunit 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) GN=rfcS2 PE=3 SV=1 137 354 1.0E-06
sp|Q46C63|RFCS_METBF Replication factor C small subunit OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rfcS PE=3 SV=1 137 350 2.0E-06
sp|Q8TPU4|RFCL_METAC Replication factor C large subunit OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rfcL PE=3 SV=1 128 358 2.0E-06
sp|Q8TZC5|RFCL_METKA Replication factor C large subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=rfcL PE=3 SV=1 134 415 2.0E-06
sp|Q4JAB1|RFCL_SULAC Replication factor C large subunit OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rfcL PE=3 SV=1 138 334 2.0E-06
sp|Q92BI2|RUVB_LISIN Holliday junction ATP-dependent DNA helicase RuvB OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=ruvB PE=3 SV=1 139 393 3.0E-06
sp|O32055|RUVB_BACSU Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus subtilis (strain 168) GN=ruvB PE=1 SV=2 135 380 3.0E-06
sp|A7Z768|RUVB_BACMF Holliday junction ATP-dependent DNA helicase RuvB OS=Bacillus methylotrophicus (strain DSM 23117 / BGSC 10A6 / FZB42) GN=ruvB PE=3 SV=1 135 373 3.0E-06
sp|A0AIY1|RUVB_LISW6 Holliday junction ATP-dependent DNA helicase RuvB OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=ruvB PE=3 SV=1 139 393 4.0E-06
sp|B8DHL6|RUVB_LISMH Holliday junction ATP-dependent DNA helicase RuvB OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=ruvB PE=3 SV=1 139 393 4.0E-06
sp|A9A6N2|RFCL_METM6 Replication factor C large subunit OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rfcL PE=3 SV=1 135 334 4.0E-06
sp|Q54ST4|RFC5_DICDI Probable replication factor C subunit 5 OS=Dictyostelium discoideum GN=rfc5 PE=3 SV=1 128 344 4.0E-06
sp|A6TQM5|RUVB_ALKMQ Holliday junction ATP-dependent DNA helicase RuvB OS=Alkaliphilus metalliredigens (strain QYMF) GN=ruvB PE=3 SV=1 135 393 6.0E-06
sp|A6VIW1|RFCL_METM7 Replication factor C large subunit OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rfcL PE=3 SV=1 135 351 6.0E-06
sp|Q8ZWS2|RFCS2_PYRAE Replication factor C small subunit 2 OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=rfcS2 PE=3 SV=1 137 354 7.0E-06
sp|B9LZC4|RUVB_GEODF Holliday junction ATP-dependent DNA helicase RuvB OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=ruvB PE=3 SV=1 139 364 7.0E-06
sp|C5CIU4|RUVB_KOSOT Holliday junction ATP-dependent DNA helicase RuvB OS=Kosmotoga olearia (strain TBF 19.5.1) GN=ruvB PE=3 SV=1 135 344 7.0E-06
sp|A4FZL6|RFCL_METM5 Replication factor C large subunit OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rfcL PE=3 SV=1 136 334 7.0E-06
sp|A2BL93|RFCL_HYPBU Replication factor C large subunit OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) GN=rfcL PE=3 SV=1 134 357 9.0E-06
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GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0006310 DNA recombination Yes
GO:0009378 four-way junction helicase activity Yes
GO:0006281 DNA repair Yes
GO:0016887 ATP hydrolysis activity Yes
GO:0006950 response to stress No
GO:1901360 organic cyclic compound metabolic process No
GO:0008152 metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0009987 cellular process No
GO:0044260 cellular macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0017111 nucleoside-triphosphatase activity No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0036094 small molecule binding No
GO:0030554 adenyl nucleotide binding No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0050896 response to stimulus No
GO:0005488 binding No
GO:0051716 cellular response to stimulus No
GO:0032555 purine ribonucleotide binding No
GO:0008150 biological_process No
GO:0016787 hydrolase activity No
GO:0046483 heterocycle metabolic process No
GO:0140097 catalytic activity, acting on DNA No
GO:0008094 ATP-dependent activity, acting on DNA No
GO:0003678 DNA helicase activity No
GO:0017076 purine nucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0140657 ATP-dependent activity No
GO:0090304 nucleic acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0004386 helicase activity No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0032553 ribonucleotide binding No
GO:0043168 anion binding No
GO:0006974 cellular response to DNA damage stimulus No
GO:0016462 pyrophosphatase activity No
GO:0000166 nucleotide binding No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0032559 adenyl ribonucleotide binding No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0033554 cellular response to stress No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0006807 nitrogen compound metabolic process No
GO:1901265 nucleoside phosphate binding No
GO:0006259 DNA metabolic process No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.1919 0.9021 0.0625 0.0103 0.1949 0.0077 0.0173 0.009 0.0119 0.0118

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3280
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3608
Ophiocordyceps australis map64 (Brazil) OphauB2|6272
Ophiocordyceps camponoti-floridani Ophcf2|04339
Ophiocordyceps camponoti-rufipedis Ophun1|1516
Ophiocordyceps kimflemingae Ophio5|8023
Ophiocordyceps subramaniannii Hirsu2|60 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|60
MAVDCPICNKPVRPSHINSHIDSGCTSFLADKEPSPPRSQQNGASSQPQKRSASAFFSTPAPKRTHTAAKDGLLT
TSLTSRAAAGKKRSFDEGPGAGLMDVEEEAKEASAEANGRADDAAATATKRVKTQRAAPLAERMRPQTLEQVCGQ
DLVGPTGVLRSLIESDRVPSMILWGASGTGKTTIARCIAHAVGSRFIELNATSTGVSECKKLFQEAANDLALSGR
KTIVFCDEMHRFNKAQQDVFLKPVEAGTVTLIGATTENPSFRIASALLSRCRTFTLKALTADDIVAILRRARQAE
EAVYPPTPLVDDDMLAYLARFSDGDARTALNLLELALSLTTRDGVTRDDIKASLTKTLVYDRGGDQHYDSISAFH
KSVRGSDPDAALYYLARMLQSGEDPLFIARRMVVIASEDVGLADNTLLPLATAAYTAAQQIGLPEARIPLAHCAV
ALCLAPKSTRAYRALNNAFAALREPGAAALPVPLHLRNAPTRLMRDMGYGADYKYPPNYRDGQVRQTYLPDALVG
RRFFEERHLGTEVDPDLVMGEAGN*
Coding >Hirsu2|60
ATGGCGGTGGACTGTCCCATCTGCAACAAGCCCGTCAGGCCTTCGCATATAAATAGCCATATCGACTCGGGCTGC
ACAAGCTTCCTCGCCGATAAGGAGCCTTCGCCCCCGCGTTCGCAGCAGAATGGCGCCTCGTCACAGCCGCAGAAG
CGCAGCGCCTCGGCCTTCTTCTCCACGCCCGCGCCGAAGCGCACCCACACCGCGGCCAAGGATGGCCTCCTGACG
ACGTCCCTCACCAGCCGGGCGGCTGCGGGAAAGAAGAGGAGCTTCGACGAGGGTCCTGGCGCCGGCCTGATGGAC
GTGGAAGAGGAGGCGAAGGAGGCGTCGGCCGAGGCCAACGGGCGGGCAGACGACGCGGCGGCGACGGCAACCAAG
CGGGTCAAGACGCAACGGGCGGCGCCCCTGGCCGAGAGGATGCGCCCGCAGACGCTGGAACAGGTGTGCGGCCAG
GATCTCGTCGGGCCGACGGGCGTGCTGCGCTCGCTCATCGAGTCGGACCGCGTGCCGTCCATGATCCTGTGGGGG
GCCTCGGGCACGGGCAAGACGACCATCGCCCGCTGCATCGCCCACGCCGTCGGCAGCCGCTTCATCGAGCTCAAC
GCGACAAGCACGGGCGTGTCCGAGTGCAAGAAGCTGTTCCAGGAGGCGGCCAACGACCTGGCTCTCAGCGGCCGC
AAGACCATCGTCTTCTGCGACGAGATGCACCGCTTCAACAAGGCCCAGCAAGACGTCTTTCTCAAGCCGGTAGAG
GCCGGCACCGTCACTCTCATCGGCGCCACGACGGAGAACCCGTCCTTCCGCATCGCCAGCGCCCTGCTGTCCCGC
TGCCGCACGTTCACCCTCAAGGCCCTGACGGCCGACGACATCGTCGCCATCCTGAGGCGCGCCCGCCAGGCCGAG
GAGGCCGTCTACCCGCCCACGCCGCTCGTCGACGACGACATGCTGGCCTATCTGGCCCGCTTCAGCGACGGCGAC
GCCCGGACCGCCCTCAACCTCCTCGAGCTGGCCCTGTCGCTGACGACGCGCGACGGCGTCACCCGGGACGACATC
AAGGCCTCACTGACCAAGACGCTCGTCTACGACCGCGGCGGCGACCAGCACTACGACTCCATCTCCGCCTTCCAC
AAGTCAGTCCGTGGCAGCGACCCGGACGCCGCCCTCTACTACCTCGCCCGCATGCTGCAGTCGGGCGAGGACCCC
CTCTTCATCGCCCGCCGCATGGTCGTCATCGCCTCCGAGGACGTCGGCCTGGCCGACAACACGCTGCTGCCCCTG
GCCACGGCCGCCTACACGGCCGCCCAGCAGATTGGCCTGCCCGAGGCCCGGATCCCGCTCGCCCATTGCGCCGTC
GCCCTGTGCCTGGCGCCCAAGAGCACGCGCGCCTACCGCGCGCTCAACAACGCCTTCGCCGCCCTGCGCGAGCCC
GGCGCGGCCGCCCTGCCGGTGCCGCTACACCTCCGCAACGCGCCCACCCGCCTCATGCGCGACATGGGCTACGGC
GCCGACTACAAGTACCCCCCCAACTACCGCGACGGCCAGGTCCGCCAGACCTATCTGCCCGACGCCCTCGTCGGT
CGCCGCTTCTTCGAGGAACGCCATCTCGGCACCGAGGTCGACCCGGATCTAGTCATGGGCGAGGCGGGAAATTAG
Transcript >Hirsu2|60
ATGGCGGTGGACTGTCCCATCTGCAACAAGCCCGTCAGGCCTTCGCATATAAATAGCCATATCGACTCGGGCTGC
ACAAGCTTCCTCGCCGATAAGGAGCCTTCGCCCCCGCGTTCGCAGCAGAATGGCGCCTCGTCACAGCCGCAGAAG
CGCAGCGCCTCGGCCTTCTTCTCCACGCCCGCGCCGAAGCGCACCCACACCGCGGCCAAGGATGGCCTCCTGACG
ACGTCCCTCACCAGCCGGGCGGCTGCGGGAAAGAAGAGGAGCTTCGACGAGGGTCCTGGCGCCGGCCTGATGGAC
GTGGAAGAGGAGGCGAAGGAGGCGTCGGCCGAGGCCAACGGGCGGGCAGACGACGCGGCGGCGACGGCAACCAAG
CGGGTCAAGACGCAACGGGCGGCGCCCCTGGCCGAGAGGATGCGCCCGCAGACGCTGGAACAGGTGTGCGGCCAG
GATCTCGTCGGGCCGACGGGCGTGCTGCGCTCGCTCATCGAGTCGGACCGCGTGCCGTCCATGATCCTGTGGGGG
GCCTCGGGCACGGGCAAGACGACCATCGCCCGCTGCATCGCCCACGCCGTCGGCAGCCGCTTCATCGAGCTCAAC
GCGACAAGCACGGGCGTGTCCGAGTGCAAGAAGCTGTTCCAGGAGGCGGCCAACGACCTGGCTCTCAGCGGCCGC
AAGACCATCGTCTTCTGCGACGAGATGCACCGCTTCAACAAGGCCCAGCAAGACGTCTTTCTCAAGCCGGTAGAG
GCCGGCACCGTCACTCTCATCGGCGCCACGACGGAGAACCCGTCCTTCCGCATCGCCAGCGCCCTGCTGTCCCGC
TGCCGCACGTTCACCCTCAAGGCCCTGACGGCCGACGACATCGTCGCCATCCTGAGGCGCGCCCGCCAGGCCGAG
GAGGCCGTCTACCCGCCCACGCCGCTCGTCGACGACGACATGCTGGCCTATCTGGCCCGCTTCAGCGACGGCGAC
GCCCGGACCGCCCTCAACCTCCTCGAGCTGGCCCTGTCGCTGACGACGCGCGACGGCGTCACCCGGGACGACATC
AAGGCCTCACTGACCAAGACGCTCGTCTACGACCGCGGCGGCGACCAGCACTACGACTCCATCTCCGCCTTCCAC
AAGTCAGTCCGTGGCAGCGACCCGGACGCCGCCCTCTACTACCTCGCCCGCATGCTGCAGTCGGGCGAGGACCCC
CTCTTCATCGCCCGCCGCATGGTCGTCATCGCCTCCGAGGACGTCGGCCTGGCCGACAACACGCTGCTGCCCCTG
GCCACGGCCGCCTACACGGCCGCCCAGCAGATTGGCCTGCCCGAGGCCCGGATCCCGCTCGCCCATTGCGCCGTC
GCCCTGTGCCTGGCGCCCAAGAGCACGCGCGCCTACCGCGCGCTCAACAACGCCTTCGCCGCCCTGCGCGAGCCC
GGCGCGGCCGCCCTGCCGGTGCCGCTACACCTCCGCAACGCGCCCACCCGCCTCATGCGCGACATGGGCTACGGC
GCCGACTACAAGTACCCCCCCAACTACCGCGACGGCCAGGTCCGCCAGACCTATCTGCCCGACGCCCTCGTCGGT
CGCCGCTTCTTCGAGGAACGCCATCTCGGCACCGAGGTCGACCCGGATCTAGTCATGGGCGAGGCGGGAAATTAG
Gene >Hirsu2|60
ATGGCGGTGGACTGTCCCATCTGCAACAAGCCCGTCAGGCCTTCGCATATAAATAGCCATATCGACTCGGGCTGC
ACAAGCTTCCTCGCCGATAAGGAGCCTTCGCCCCCGCGTTCGCAGCAGAATGGCGCCTCGTCACAGCCGCAGAAG
CGCAGCGCCTCGGCCTTCTTCTCCACGCCCGCGCCGAAGCGCACCCACACCGCGGCCAAGGATGGCCTCCTGACG
ACGTCCCTCACCAGCCGGGCGGCTGCGGGAAAGAAGAGGAGCTTCGACGAGGGTCCTGGCGCCGGCCTGATGGAC
GTGGAAGAGGAGGCGAAGGAGGCGTCGGCCGAGGCCAACGGGCGGGCAGACGACGCGGCGGCGACGGCAACCAAG
CGGGTCAAGACGCAACGGGCGGCGCCCCTGGCCGAGAGGATGCGCCCGCAGACGCTGGAACAGGTGTGCGGCCAG
GATCTCGTCGGGCCGACGGGCGTGCTGCGCTCGCTCATCGAGTCGGACCGCGTGCCGTCCATGATCCTGTGGGGG
GCCTCGGGCACGGGCAAGACGACCATCGCCCGCTGCATCGCCCACGCCGTCGGCAGCCGCTTCATCGAGCTCAAC
GCGACAAGCACGGGCGTGTCCGAGTGCAAGAAGCTGTTCCAGGAGGCGGCCAACGACCTGGCTCTCAGCGGCCGC
AAGACCATCGTCTTCTGCGACGAGATGCACCGCTTCAACAAGGCCCAGCAAGACGTCTTTCTCAAGCCGGTAGAG
GCCGGCACCGTCACTCTCATCGGCGCCACGACGGAGAACCCGTCCTTCCGCATCGCCAGCGCCCTGCTGTCCCGC
TGCCGCACGTTCACCCTCAAGGCCCTGACGGCCGACGACATCGTCGCCATCCTGAGGCGCGCCCGCCAGGCCGAG
GAGGCCGTCTACCCGCCCACGCCGCTCGTCGACGACGACATGCTGGCCTATCTGGCCCGCTTCAGCGACGGCGAC
GCCCGGACCGCCCTCAACCTCCTCGAGCTGGCCCTGTCGCTGACGACGCGCGACGGCGTCACCCGGGACGACATC
AAGGCCTCACTGACCAAGACGCTCGTCTACGACCGCGGCGGCGACCAGCACTACGACTCCATCTCCGCCTTCCAC
AAGTCAGTCCGTGGCAGCGACCCGGACGCCGCCCTCTACTACCTCGCCCGCATGCTGCAGTCGGGCGAGGACCCC
CTCTTCATCGCCCGCCGCATGGTCGTCATCGCCTCCGAGGACGTCGGCCTGGCCGACAACACGCTGCTGCCCCTG
GCCACGGCCGCCTACACGGCCGCCCAGCAGATTGGCCTGCCCGAGGCCCGGATCCCGCTCGCCCATTGCGCCGTC
GCCCTGTGCCTGGCGCCCAAGAGCACGCGCGCCTACCGCGCGCTCAACAACGCCTTCGCCGCCCTGCGCGAGCCC
GGCGCGGCCGCCCTGCCGGTGCCGCTACACCTCCGCAACGCGCCCACCCGCCTCATGCGCGACATGGGCTACGGC
GCCGACTACAAGTACCCCCCCAACTACCGCGACGGCCAGGTCCGCCAGACCTATCTGCCCGACGCCCTCGTCGGT
CGCCGCTTCTTCGAGGAACGCCATCTCGGCACCGAGGTCGACCCGGATCTAGTCATGGGCGAGGCGGGAAATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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