Protein ID | Hirsu2|6 |
Gene name | |
Location | Contig_10:13321..14230 |
Strand | + |
Gene length (bp) | 909 |
Transcript length (bp) | 909 |
Coding sequence length (bp) | 909 |
Protein length (aa) | 303 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P08658|LIP_PSEFR | Lipase OS=Pseudomonas fragi PE=3 SV=2 | 70 | 220 | 9.0E-11 |
sp|Q05489|LIP_BURGL | Lipase OS=Burkholderia glumae GN=lipA PE=1 SV=1 | 70 | 172 | 5.0E-07 |
sp|P22088|LIP_BURCE | Lipase OS=Burkholderia cepacia GN=lipA PE=1 SV=2 | 70 | 172 | 1.0E-06 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0589 | 0.0337 | 0.946 | 0.0762 | 0.1374 | 0.0287 | 0.2994 | 0.2519 | 0.1996 | 0.0179 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.999401 |
Orthofinder run ID | 4 |
Orthogroup | 3279 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|6 MLFRQLPLLAAVLSGLAGLATATPLPEEQQQQQDQGQGLQSAQEVQRAQEEAALGRSNDWSCRSSKHPNPVVLVH ALFGSDKIGLNFLEGWLRKRGFCTFAPFYGSYVPFLPVLGGLKPIAQSSAEVADFVREVRRRTGAAKVDLVGHSE GGFQSLYVPKFYPDVAAGVDRIVAIAPPTHGTTLLGLQRLLNLLGLVGCAACSDFTTDSPAVARLNDGRPIVQPG NRLTVVASRLDEVVTPPSSSFVDEPAVQNIFVQDYCPIDLAGHLGENIDRNVWNLVLNALEDQHGRKFPCLGGPP GR* |
Coding | >Hirsu2|6 ATGTTGTTCCGCCAGCTTCCGCTCCTGGCCGCCGTGCTGTCCGGCCTCGCCGGCCTCGCCACGGCAACGCCCCTC CCCGAGGAGCAGCAGCAGCAGCAGGACCAGGGGCAGGGGCTGCAGAGCGCGCAGGAGGTGCAGAGGGCGCAGGAG GAGGCGGCTCTGGGCCGGTCCAACGACTGGTCGTGCCGGAGCAGCAAGCACCCCAACCCCGTCGTCCTCGTGCAC GCCCTCTTCGGCAGCGACAAGATCGGGCTCAACTTCCTCGAGGGCTGGCTCCGCAAGCGCGGCTTCTGCACCTTC GCCCCCTTCTACGGCTCGTACGTGCCCTTCCTGCCGGTCCTGGGCGGCCTCAAGCCGATCGCGCAGTCGTCGGCC GAGGTAGCCGACTTCGTGCGTGAGGTGCGTCGCCGCACCGGCGCCGCCAAGGTCGACCTCGTCGGCCACTCCGAG GGCGGCTTCCAGTCGCTCTACGTGCCCAAGTTCTACCCGGACGTGGCGGCCGGCGTCGACCGCATCGTCGCCATC GCGCCGCCCACCCACGGCACCACCCTGCTCGGCCTGCAGAGGCTGCTCAACCTGCTCGGCCTCGTCGGCTGCGCC GCCTGCAGCGACTTCACCACCGACAGCCCCGCCGTCGCCCGCCTCAACGACGGCCGCCCCATCGTCCAGCCCGGC AACCGCCTGACCGTCGTCGCCTCGCGCCTCGACGAGGTCGTCACCCCCCCCTCCAGCTCCTTCGTTGACGAGCCG GCCGTCCAGAACATCTTCGTCCAGGACTACTGCCCCATCGACCTGGCCGGCCACCTCGGCGAGAACATCGACCGC AACGTCTGGAACCTCGTCCTCAACGCCCTCGAGGACCAGCACGGCCGCAAGTTCCCCTGCCTGGGCGGGCCCCCC GGCCGCTGA |
Transcript | >Hirsu2|6 ATGTTGTTCCGCCAGCTTCCGCTCCTGGCCGCCGTGCTGTCCGGCCTCGCCGGCCTCGCCACGGCAACGCCCCTC CCCGAGGAGCAGCAGCAGCAGCAGGACCAGGGGCAGGGGCTGCAGAGCGCGCAGGAGGTGCAGAGGGCGCAGGAG GAGGCGGCTCTGGGCCGGTCCAACGACTGGTCGTGCCGGAGCAGCAAGCACCCCAACCCCGTCGTCCTCGTGCAC GCCCTCTTCGGCAGCGACAAGATCGGGCTCAACTTCCTCGAGGGCTGGCTCCGCAAGCGCGGCTTCTGCACCTTC GCCCCCTTCTACGGCTCGTACGTGCCCTTCCTGCCGGTCCTGGGCGGCCTCAAGCCGATCGCGCAGTCGTCGGCC GAGGTAGCCGACTTCGTGCGTGAGGTGCGTCGCCGCACCGGCGCCGCCAAGGTCGACCTCGTCGGCCACTCCGAG GGCGGCTTCCAGTCGCTCTACGTGCCCAAGTTCTACCCGGACGTGGCGGCCGGCGTCGACCGCATCGTCGCCATC GCGCCGCCCACCCACGGCACCACCCTGCTCGGCCTGCAGAGGCTGCTCAACCTGCTCGGCCTCGTCGGCTGCGCC GCCTGCAGCGACTTCACCACCGACAGCCCCGCCGTCGCCCGCCTCAACGACGGCCGCCCCATCGTCCAGCCCGGC AACCGCCTGACCGTCGTCGCCTCGCGCCTCGACGAGGTCGTCACCCCCCCCTCCAGCTCCTTCGTTGACGAGCCG GCCGTCCAGAACATCTTCGTCCAGGACTACTGCCCCATCGACCTGGCCGGCCACCTCGGCGAGAACATCGACCGC AACGTCTGGAACCTCGTCCTCAACGCCCTCGAGGACCAGCACGGCCGCAAGTTCCCCTGCCTGGGCGGGCCCCCC GGCCGCTGA |
Gene | >Hirsu2|6 ATGTTGTTCCGCCAGCTTCCGCTCCTGGCCGCCGTGCTGTCCGGCCTCGCCGGCCTCGCCACGGCAACGCCCCTC CCCGAGGAGCAGCAGCAGCAGCAGGACCAGGGGCAGGGGCTGCAGAGCGCGCAGGAGGTGCAGAGGGCGCAGGAG GAGGCGGCTCTGGGCCGGTCCAACGACTGGTCGTGCCGGAGCAGCAAGCACCCCAACCCCGTCGTCCTCGTGCAC GCCCTCTTCGGCAGCGACAAGATCGGGCTCAACTTCCTCGAGGGCTGGCTCCGCAAGCGCGGCTTCTGCACCTTC GCCCCCTTCTACGGCTCGTACGTGCCCTTCCTGCCGGTCCTGGGCGGCCTCAAGCCGATCGCGCAGTCGTCGGCC GAGGTAGCCGACTTCGTGCGTGAGGTGCGTCGCCGCACCGGCGCCGCCAAGGTCGACCTCGTCGGCCACTCCGAG GGCGGCTTCCAGTCGCTCTACGTGCCCAAGTTCTACCCGGACGTGGCGGCCGGCGTCGACCGCATCGTCGCCATC GCGCCGCCCACCCACGGCACCACCCTGCTCGGCCTGCAGAGGCTGCTCAACCTGCTCGGCCTCGTCGGCTGCGCC GCCTGCAGCGACTTCACCACCGACAGCCCCGCCGTCGCCCGCCTCAACGACGGCCGCCCCATCGTCCAGCCCGGC AACCGCCTGACCGTCGTCGCCTCGCGCCTCGACGAGGTCGTCACCCCCCCCTCCAGCTCCTTCGTTGACGAGCCG GCCGTCCAGAACATCTTCGTCCAGGACTACTGCCCCATCGACCTGGCCGGCCACCTCGGCGAGAACATCGACCGC AACGTCTGGAACCTCGTCCTCAACGCCCTCGAGGACCAGCACGGCCGCAAGTTCCCCTGCCTGGGCGGGCCCCCC GGCCGCTGA |