Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5985
Gene name
LocationContig_3017:24..1221
Strand+
Gene length (bp)1197
Transcript length (bp)1197
Coding sequence length (bp)1197
Protein length (aa) 399

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 1.1E-50 23 394

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 1 398 3.0E-52
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 6 398 3.0E-49
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 5 398 7.0E-39
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 2 398 9.0E-33
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 22 398 3.0E-30
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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 1 398 3.0E-52
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 6 398 3.0E-49
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 5 398 7.0E-39
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 2 398 9.0E-33
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 22 398 3.0E-30
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 189 398 3.0E-23
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 233 398 5.0E-23
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 226 398 7.0E-23
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 205 398 1.0E-22
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 8 398 1.0E-22
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 224 398 1.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 231 398 2.0E-22
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 223 398 3.0E-22
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 238 398 7.0E-22
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 172 398 3.0E-21
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 16 398 1.0E-20
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 245 398 1.0E-20
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 245 398 2.0E-20
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 172 398 4.0E-20
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 245 398 6.0E-20
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 245 398 7.0E-20
sp|Q6L8F9|ZIP6_ORYSJ Zinc transporter 6 OS=Oryza sativa subsp. japonica GN=ZIP6 PE=2 SV=1 13 398 1.0E-19
sp|Q5Z653|ZIP10_ORYSJ Zinc transporter 10 OS=Oryza sativa subsp. japonica GN=ZIP10 PE=3 SV=2 245 367 3.0E-19
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 238 398 4.0E-18
sp|O64738|ZIP6_ARATH Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1 227 398 7.0E-17
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 272 398 3.0E-15
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 1 89 9.0E-11
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 22 104 2.0E-08
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 14 140 4.0E-08
sp|Q54MB9|ZNTC_DICDI Protein zntC OS=Dictyostelium discoideum GN=zntC PE=2 SV=1 252 397 4.0E-07
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 14 116 6.0E-07
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 9 95 9.0E-07
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 7 89 4.0E-06
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 22 89 9.0E-06
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0008324 cation transmembrane transporter activity No
GO:0008150 biological_process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0006812 cation transport No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0022857 transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 63 85 22
3 100 119 19
4 243 265 22
5 269 291 22
6 304 326 22
7 336 358 22
8 378 397 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5985
LARRATCKTGGVDGAADYNTPLHVAALLIIWFVSTLGCSFPIMAAKMPRLRIPPRFFFAVRHFGTGVLIATAFVH
LLPTAFVSLGNPCLGSFWTKQYEAMPGAIALAAIFLVTVVEMALHPSRHVQPSPVLSDPSAAPSSPPPPPPAARH
LCSGTAMLPFRDMGPLSGRSSSMAHGLARLGNSTAVDGSGDIETGDRAAAAAADSDRAKPDPEHDSHDGFDSCGG
GEQPLSPELKRRKERLQCILLEMGILFHSVFIGMALSVSVGTDFVVLLIAIVFHQTFEGLALGARIAAIEWEAKT
WQPWAMALAYGCTTPIGQAIGLATHTLYSPDSEVGLIVVGVMNAISAGLLTFASLVELLSEDFLSDESWRHLRGK
SRVIACVLVFLGAFFMSLVGAWA*
Coding >Hirsu2|5985
CTGGCCCGCCGCGCGACCTGCAAGACGGGCGGCGTCGACGGCGCGGCCGACTATAACACGCCGCTGCACGTCGCC
GCCCTGCTTATCATCTGGTTCGTCAGTACCCTCGGCTGCTCGTTCCCCATCATGGCCGCCAAGATGCCGCGCCTG
CGCATCCCGCCCCGCTTCTTCTTCGCCGTCCGCCACTTCGGCACCGGCGTCCTCATCGCCACCGCCTTCGTCCAC
CTGCTGCCCACCGCCTTCGTCTCGCTCGGAAACCCCTGCCTCGGCAGCTTCTGGACCAAGCAGTACGAGGCCATG
CCCGGCGCCATCGCCTTGGCCGCCATCTTCCTCGTCACCGTCGTCGAGATGGCCCTGCACCCCTCGCGCCACGTC
CAGCCCTCGCCCGTCCTCTCCGACCCGTCCGCCGCTCCGTCGTCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCAC
CTGTGCTCCGGCACCGCCATGCTGCCCTTCCGCGACATGGGCCCGCTCAGCGGCCGCTCCTCCAGCATGGCCCAC
GGCCTGGCCCGGCTCGGCAACAGCACGGCCGTCGACGGCAGCGGCGACATCGAGACGGGCGACCGGGCCGCCGCC
GCCGCCGCCGACTCGGACCGCGCCAAGCCCGACCCGGAACACGACAGCCACGACGGCTTCGACTCGTGCGGCGGC
GGCGAGCAGCCGCTGTCGCCCGAGCTGAAGCGCCGCAAGGAGCGGCTCCAGTGCATCCTGCTCGAGATGGGCATC
CTCTTCCACAGCGTCTTCATCGGCATGGCCCTCAGCGTCTCCGTCGGCACCGACTTCGTCGTCCTCCTCATCGCC
ATCGTCTTCCACCAGACCTTCGAGGGCCTGGCCCTGGGCGCCCGCATCGCCGCCATCGAGTGGGAGGCCAAGACG
TGGCAGCCGTGGGCCATGGCCCTGGCCTACGGCTGCACCACGCCCATCGGCCAGGCCATCGGCCTCGCCACCCAC
ACCCTCTACAGCCCGGACTCCGAGGTCGGCCTCATCGTCGTCGGCGTCATGAACGCCATCTCGGCCGGCCTGCTC
ACATTTGCCTCGCTCGTCGAGCTGCTGTCCGAGGACTTCCTCAGCGACGAGAGCTGGCGCCATCTGCGCGGCAAG
TCGCGCGTCATCGCCTGCGTCCTCGTCTTCCTCGGCGCCTTCTTCATGAGCCTCGTCGGCGCCTGGGCCTGA
Transcript >Hirsu2|5985
CTGGCCCGCCGCGCGACCTGCAAGACGGGCGGCGTCGACGGCGCGGCCGACTATAACACGCCGCTGCACGTCGCC
GCCCTGCTTATCATCTGGTTCGTCAGTACCCTCGGCTGCTCGTTCCCCATCATGGCCGCCAAGATGCCGCGCCTG
CGCATCCCGCCCCGCTTCTTCTTCGCCGTCCGCCACTTCGGCACCGGCGTCCTCATCGCCACCGCCTTCGTCCAC
CTGCTGCCCACCGCCTTCGTCTCGCTCGGAAACCCCTGCCTCGGCAGCTTCTGGACCAAGCAGTACGAGGCCATG
CCCGGCGCCATCGCCTTGGCCGCCATCTTCCTCGTCACCGTCGTCGAGATGGCCCTGCACCCCTCGCGCCACGTC
CAGCCCTCGCCCGTCCTCTCCGACCCGTCCGCCGCTCCGTCGTCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCAC
CTGTGCTCCGGCACCGCCATGCTGCCCTTCCGCGACATGGGCCCGCTCAGCGGCCGCTCCTCCAGCATGGCCCAC
GGCCTGGCCCGGCTCGGCAACAGCACGGCCGTCGACGGCAGCGGCGACATCGAGACGGGCGACCGGGCCGCCGCC
GCCGCCGCCGACTCGGACCGCGCCAAGCCCGACCCGGAACACGACAGCCACGACGGCTTCGACTCGTGCGGCGGC
GGCGAGCAGCCGCTGTCGCCCGAGCTGAAGCGCCGCAAGGAGCGGCTCCAGTGCATCCTGCTCGAGATGGGCATC
CTCTTCCACAGCGTCTTCATCGGCATGGCCCTCAGCGTCTCCGTCGGCACCGACTTCGTCGTCCTCCTCATCGCC
ATCGTCTTCCACCAGACCTTCGAGGGCCTGGCCCTGGGCGCCCGCATCGCCGCCATCGAGTGGGAGGCCAAGACG
TGGCAGCCGTGGGCCATGGCCCTGGCCTACGGCTGCACCACGCCCATCGGCCAGGCCATCGGCCTCGCCACCCAC
ACCCTCTACAGCCCGGACTCCGAGGTCGGCCTCATCGTCGTCGGCGTCATGAACGCCATCTCGGCCGGCCTGCTC
ACATTTGCCTCGCTCGTCGAGCTGCTGTCCGAGGACTTCCTCAGCGACGAGAGCTGGCGCCATCTGCGCGGCAAG
TCGCGCGTCATCGCCTGCGTCCTCGTCTTCCTCGGCGCCTTCTTCATGAGCCTCGTCGGCGCCTGGGCCTGA
Gene >Hirsu2|5985
CTGGCCCGCCGCGCGACCTGCAAGACGGGCGGCGTCGACGGCGCGGCCGACTATAACACGCCGCTGCACGTCGCC
GCCCTGCTTATCATCTGGTTCGTCAGTACCCTCGGCTGCTCGTTCCCCATCATGGCCGCCAAGATGCCGCGCCTG
CGCATCCCGCCCCGCTTCTTCTTCGCCGTCCGCCACTTCGGCACCGGCGTCCTCATCGCCACCGCCTTCGTCCAC
CTGCTGCCCACCGCCTTCGTCTCGCTCGGAAACCCCTGCCTCGGCAGCTTCTGGACCAAGCAGTACGAGGCCATG
CCCGGCGCCATCGCCTTGGCCGCCATCTTCCTCGTCACCGTCGTCGAGATGGCCCTGCACCCCTCGCGCCACGTC
CAGCCCTCGCCCGTCCTCTCCGACCCGTCCGCCGCTCCGTCGTCGCCGCCGCCGCCGCCGCCCGCCGCCCGCCAC
CTGTGCTCCGGCACCGCCATGCTGCCCTTCCGCGACATGGGCCCGCTCAGCGGCCGCTCCTCCAGCATGGCCCAC
GGCCTGGCCCGGCTCGGCAACAGCACGGCCGTCGACGGCAGCGGCGACATCGAGACGGGCGACCGGGCCGCCGCC
GCCGCCGCCGACTCGGACCGCGCCAAGCCCGACCCGGAACACGACAGCCACGACGGCTTCGACTCGTGCGGCGGC
GGCGAGCAGCCGCTGTCGCCCGAGCTGAAGCGCCGCAAGGAGCGGCTCCAGTGCATCCTGCTCGAGATGGGCATC
CTCTTCCACAGCGTCTTCATCGGCATGGCCCTCAGCGTCTCCGTCGGCACCGACTTCGTCGTCCTCCTCATCGCC
ATCGTCTTCCACCAGACCTTCGAGGGCCTGGCCCTGGGCGCCCGCATCGCCGCCATCGAGTGGGAGGCCAAGACG
TGGCAGCCGTGGGCCATGGCCCTGGCCTACGGCTGCACCACGCCCATCGGCCAGGCCATCGGCCTCGCCACCCAC
ACCCTCTACAGCCCGGACTCCGAGGTCGGCCTCATCGTCGTCGGCGTCATGAACGCCATCTCGGCCGGCCTGCTC
ACATTTGCCTCGCTCGTCGAGCTGCTGTCCGAGGACTTCCTCAGCGACGAGAGCTGGCGCCATCTGCGCGGCAAG
TCGCGCGTCATCGCCTGCGTCCTCGTCTTCCTCGGCGCCTTCTTCATGAGCCTCGTCGGCGCCTGGGCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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