Protein ID | Hirsu2|597 |
Gene name | |
Location | Contig_1118:30..1368 |
Strand | + |
Gene length (bp) | 1338 |
Transcript length (bp) | 1125 |
Coding sequence length (bp) | 1125 |
Protein length (aa) | 375 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | 0.0563 | 0.2374 | 0.0362 | 0.0281 | 0.7519 | 0.4422 | 0.1942 | 0.1925 | 0.0405 | 0.6382 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 187 | 204 | 17 |
2 | 225 | 247 | 22 |
3 | 252 | 269 | 17 |
4 | 305 | 322 | 17 |
Orthofinder run ID | 4 |
Orthogroup | 5435 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|597 LALAACPAGRLRVSVALFALFRALEFGWNAAEAGGLVWGVRAGRPRERPWWFGSWMLQPLAFGQLLHACVFDRDC FPDAYGNFIFGKSSAYLHQRPRSWPAHMKWPTTRQIVDSLAEMARLNWPAYVSPTLFPNKEEVLPPTLQVVAPLS SRAHPLITSLSCATLHPSDPSCLRTYLTFWLQSFPPLARFFLLVCSGMTVLPRLKRLHDQPVATVQSIVARALRL STFVAGAISTAWASICLFQAYLPRHVLATQRFFLGGFFAGLWAWAERRHGRAVFLHSARASVDSLWKVGVKRRWW KAMRGGDVWVFVAALMLTGVVYERDARAIREGHWRKGVSWVRGEGWRDWSAEAETDEEEEEEELEGHEGRVKGE* |
Coding | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGCATACGGCAACTTCATCTTCGGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCC GCGCACATGAAGTGGCCGACGACGCGGCAGATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCAGCC TACGTCTCGCCGACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGC TCGCGGGCGCACCCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACG TACCTGACCTTCTGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTG CTGCCGCGGCTCAAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTG TCGACCTTCGTCGCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCAC GTGCTGGCGACGCAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGC CGCGCCGTCTTCCTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGG AAGGCCATGCGCGGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGAC GCCCGCGCCATCCGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGC GCCGAGGCCGAGACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |
Transcript | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGCATACGGCAACTTCATCTTCGGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCC GCGCACATGAAGTGGCCGACGACGCGGCAGATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCAGCC TACGTCTCGCCGACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGC TCGCGGGCGCACCCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACG TACCTGACCTTCTGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTG CTGCCGCGGCTCAAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTG TCGACCTTCGTCGCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCAC GTGCTGGCGACGCAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGC CGCGCCGTCTTCCTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGG AAGGCCATGCGCGGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGAC GCCCGCGCCATCCGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGC GCCGAGGCCGAGACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |
Gene | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGTGAGTCGTTACCCGTTTTTTCCTTCACCTTGTTTTGCTTTCTCGGGGGGAGTCTCTGAAAAGCCT CTCGGCCCTGGATGGGACCTCGGCTGACTCTCTTCTCTTTCTGTCTCCTCTCAGGCATACGGCAACTTCATCTTC GGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCCGCGCACATGAAGTGGCCGACGACGCGGCAG ATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCGTACGTTTTGCGAACCCGCCTCCCTCCTCTCCTC CTCCCCCTTCCGGCCTTGCCCCGTCCGTCCGTCCCGTCCGCTGACGCAGCAGGGTGCAGAGCCTACGTCTCGCCG ACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGCTCGCGGGCGCAC CCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACGTACCTGACCTTC TGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTGCTGCCGCGGCTC AAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTGTCGACCTTCGTC GCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCACGTGCTGGCGACG CAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGCCGCGCCGTCTTC CTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGGAAGGCCATGCGC GGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGACGCCCGCGCCATC CGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGCGCCGAGGCCGAG ACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |