© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|597 |
| Gene name | |
| Location | Contig_1118:30..1368 |
| Strand | + |
| Gene length (bp) | 1338 |
| Transcript length (bp) | 1125 |
| Coding sequence length (bp) | 1125 |
| Protein length (aa) | 375 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | 0.0563 | 0.2374 | 0.0362 | 0.0281 | 0.7519 | 0.4422 | 0.1942 | 0.1925 | 0.0405 | 0.6382 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 187 | 204 | 17 |
| 2 | 225 | 247 | 22 |
| 3 | 252 | 269 | 17 |
| 4 | 305 | 322 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 5435 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|597 LALAACPAGRLRVSVALFALFRALEFGWNAAEAGGLVWGVRAGRPRERPWWFGSWMLQPLAFGQLLHACVFDRDC FPDAYGNFIFGKSSAYLHQRPRSWPAHMKWPTTRQIVDSLAEMARLNWPAYVSPTLFPNKEEVLPPTLQVVAPLS SRAHPLITSLSCATLHPSDPSCLRTYLTFWLQSFPPLARFFLLVCSGMTVLPRLKRLHDQPVATVQSIVARALRL STFVAGAISTAWASICLFQAYLPRHVLATQRFFLGGFFAGLWAWAERRHGRAVFLHSARASVDSLWKVGVKRRWW KAMRGGDVWVFVAALMLTGVVYERDARAIREGHWRKGVSWVRGEGWRDWSAEAETDEEEEEEELEGHEGRVKGE* |
| Coding | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGCATACGGCAACTTCATCTTCGGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCC GCGCACATGAAGTGGCCGACGACGCGGCAGATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCAGCC TACGTCTCGCCGACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGC TCGCGGGCGCACCCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACG TACCTGACCTTCTGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTG CTGCCGCGGCTCAAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTG TCGACCTTCGTCGCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCAC GTGCTGGCGACGCAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGC CGCGCCGTCTTCCTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGG AAGGCCATGCGCGGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGAC GCCCGCGCCATCCGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGC GCCGAGGCCGAGACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |
| Transcript | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGCATACGGCAACTTCATCTTCGGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCC GCGCACATGAAGTGGCCGACGACGCGGCAGATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCAGCC TACGTCTCGCCGACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGC TCGCGGGCGCACCCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACG TACCTGACCTTCTGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTG CTGCCGCGGCTCAAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTG TCGACCTTCGTCGCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCAC GTGCTGGCGACGCAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGC CGCGCCGTCTTCCTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGG AAGGCCATGCGCGGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGAC GCCCGCGCCATCCGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGC GCCGAGGCCGAGACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |
| Gene | >Hirsu2|597 CTGGCGCTCGCCGCCTGCCCCGCCGGCCGCCTGCGCGTCTCCGTCGCCCTCTTCGCCCTCTTCCGCGCCCTCGAG TTCGGCTGGAACGCCGCCGAGGCCGGCGGGCTCGTCTGGGGCGTCCGCGCCGGCCGCCCGCGCGAGCGCCCCTGG TGGTTCGGCAGCTGGATGCTGCAGCCGTTGGCCTTTGGCCAGCTGCTGCACGCCTGTGTCTTCGACCGCGACTGC TTCCCCGACGTGAGTCGTTACCCGTTTTTTCCTTCACCTTGTTTTGCTTTCTCGGGGGGAGTCTCTGAAAAGCCT CTCGGCCCTGGATGGGACCTCGGCTGACTCTCTTCTCTTTCTGTCTCCTCTCAGGCATACGGCAACTTCATCTTC GGCAAGTCGTCGGCCTACTTGCACCAGCGGCCGCGGAGTTGGCCCGCGCACATGAAGTGGCCGACGACGCGGCAG ATCGTCGACAGCCTGGCCGAGATGGCGCGCCTGAACTGGCCGTACGTTTTGCGAACCCGCCTCCCTCCTCTCCTC CTCCCCCTTCCGGCCTTGCCCCGTCCGTCCGTCCCGTCCGCTGACGCAGCAGGGTGCAGAGCCTACGTCTCGCCG ACGCTGTTCCCCAACAAGGAGGAGGTGCTGCCGCCGACTCTGCAGGTGGTGGCGCCGCTGAGCTCGCGGGCGCAC CCGCTCATCACGTCGCTGTCGTGCGCGACGCTGCACCCGTCGGACCCGTCGTGCCTGCGGACGTACCTGACCTTC TGGCTCCAGTCCTTCCCGCCGCTGGCCCGCTTCTTCCTGCTCGTCTGCTCGGGCATGACGGTGCTGCCGCGGCTC AAGCGGCTGCACGACCAGCCGGTGGCGACGGTGCAGAGCATCGTGGCGCGCGCGCTGCGGCTGTCGACCTTCGTC GCCGGCGCCATCTCGACGGCGTGGGCCTCCATCTGCCTCTTCCAGGCCTACCTGCCGCGGCACGTGCTGGCGACG CAGCGCTTCTTCCTCGGCGGCTTCTTCGCCGGCCTGTGGGCCTGGGCGGAGCGGCGCCACGGCCGCGCCGTCTTC CTGCACAGCGCGCGCGCCAGCGTCGACAGCCTGTGGAAGGTGGGCGTCAAGCGGCGCTGGTGGAAGGCCATGCGC GGCGGCGACGTCTGGGTCTTCGTCGCGGCCCTCATGCTGACGGGCGTCGTGTACGAGCGCGACGCCCGCGCCATC CGCGAGGGCCACTGGCGCAAGGGCGTCAGCTGGGTGCGAGGCGAGGGCTGGCGCGACTGGAGCGCCGAGGCCGAG ACGGACGAGGAGGAGGAGGAGGAGGAGCTGGAGGGTCACGAGGGCCGGGTCAAGGGGGAGTGA |