Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5965
Gene name
LocationContig_3002:574..894
Strand+
Gene length (bp)320
Transcript length (bp)240
Coding sequence length (bp)240
Protein length (aa) 80

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0777 0.0493 0.964 0.0368 0.0712 0.0079 0.0446 0.151 0.0339 0.0044

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999768

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5434
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4687
Ophiocordyceps australis map64 (Brazil) OphauB2|3198
Ophiocordyceps camponoti-floridani Ophcf2|00974
Ophiocordyceps camponoti-rufipedis Ophun1|1331
Ophiocordyceps kimflemingae Ophio5|2017
Ophiocordyceps subramaniannii Hirsu2|5965 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5965
MKFIAVVIAALASAVAADYECEPGTYSCTQSEKYGHDGWKVCDVSHKWVHGGDCPPKTVCKFDHENDSPYCVPHG
FHFP*
Coding >Hirsu2|5965
ATGAAGTTCATCGCCGTCGTCATCGCCGCCCTGGCCTCCGCCGTCGCCGCCGACTACGAGTGCGAGCCCGGCACC
TACTCCTGCACCCAGAGCGAGAAGTACGGCCACGATGGCTGGAAGGTCTGCGACGTGAGCCACAAGTGGGTCCAT
GGCGGCGACTGCCCCCCCAAGACCGTCTGCAAGTTCGACCACGAGAACGACAGCCCCTACTGCGTCCCCCACGGC
TTCCACTTCCCATAG
Transcript >Hirsu2|5965
ATGAAGTTCATCGCCGTCGTCATCGCCGCCCTGGCCTCCGCCGTCGCCGCCGACTACGAGTGCGAGCCCGGCACC
TACTCCTGCACCCAGAGCGAGAAGTACGGCCACGATGGCTGGAAGGTCTGCGACGTGAGCCACAAGTGGGTCCAT
GGCGGCGACTGCCCCCCCAAGACCGTCTGCAAGTTCGACCACGAGAACGACAGCCCCTACTGCGTCCCCCACGGC
TTCCACTTCCCATAG
Gene >Hirsu2|5965
ATGAAGTTCATCGCCGTCGTCATCGCCGCCCTGGCCTCCGCCGTCGCCGCCGACTACGAGTGCGAGCCCGGCACC
TACTCCTGCACCCAGAGCGAGAAGTACGGCCACGATGGCTGGAAGGTCTGCGACGTGAGCCACAAGTGGGTCGTA
AGTCTTGGCCCTCCTGCGCCTCCAGCTCGAAAAGCGCCTTGTTCGAGTCTCGCTGACGGGCAAATGTGTGCTTTC
AGCATGGCGGCGACTGCCCCCCCAAGACCGTCTGCAAGTTCGACCACGAGAACGACAGCCCCTACTGCGTCCCCC
ACGGCTTCCACTTCCCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail