Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5958
Gene name
LocationContig_30:56040..57062
Strand+
Gene length (bp)1022
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 4.0E-11 3 316
PF06609 TRI12 Fungal trichothecene efflux pump (TRI12) 2.7E-11 83 308

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 58 19
3 73 95 22
4 116 137 21
5 147 164 17
6 185 207 22
7 220 242 22
8 249 268 19
9 278 300 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5958
MNMAIAGFCIIGISFGVQPLLHTVTSEVLPRRWRAWGQAADMASNGLGSICGLLVGGALNRTNDPASDGFRRYYL
MGMAWFVGAALLCAIVYTPPETAAQRLYRGRTADKLKMLDWVGYLLLAAGLVLFCVGLSLSQNPYPWTDPKVSAT
FATGIVLAFCLVGYETFVKRDGMFHHGLFTRDRNFSIALFCVFAEGMAFFAANIYFAFEVSVLYETDAVLVGTRY
GIMLVCSMVGAALAGLYCDITRRVRWATVLAFVIFVVFFSCMAIADRHSNTAVWGYPVLLGFALGITLTTLVTVC
QLSPAPELIAIASGLVINE*
Coding >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAATGAATAA
Transcript >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAATGAATAA
Gene >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAGTGTACGGTCTCTCGGTGGCACG
GTTGGCATCGCCATCTGGAATTCCCTCTTCACCTCTCAGATGAATAA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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