Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5958
Gene name
LocationContig_30:56040..57062
Strand+
Gene length (bp)1022
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 4.4E-11 3 316
PF06609 TRI12 Fungal trichothecene efflux pump (TRI12) 2.9E-11 83 308

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0009987 cellular process No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.0679 0.1615 0.0568 0.6786 0.0927 0.0118 0.4459 0.7374 0.2145 0.0004

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 58 19
3 73 95 22
4 116 137 21
5 147 164 17
6 185 207 22
7 220 242 22
8 249 268 19
9 278 300 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7075
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|5958 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5958
MNMAIAGFCIIGISFGVQPLLHTVTSEVLPRRWRAWGQAADMASNGLGSICGLLVGGALNRTNDPASDGFRRYYL
MGMAWFVGAALLCAIVYTPPETAAQRLYRGRTADKLKMLDWVGYLLLAAGLVLFCVGLSLSQNPYPWTDPKVSAT
FATGIVLAFCLVGYETFVKRDGMFHHGLFTRDRNFSIALFCVFAEGMAFFAANIYFAFEVSVLYETDAVLVGTRY
GIMLVCSMVGAALAGLYCDITRRVRWATVLAFVIFVVFFSCMAIADRHSNTAVWGYPVLLGFALGITLTTLVTVC
QLSPAPELIAIASGLVINE*
Coding >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAATGAATAA
Transcript >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAATGAATAA
Gene >Hirsu2|5958
ATGAACATGGCCATCGCCGGCTTCTGCATCATAGGCATCTCCTTCGGCGTCCAACCTCTCCTTCACACCGTCACG
TCTGAGGTGCTACCCCGGCGATGGCGCGCCTGGGGCCAGGCCGCCGATATGGCCTCCAACGGCCTGGGTAGCATC
TGCGGCCTTCTGGTCGGCGGAGCCCTTAACCGGACAAACGACCCGGCCTCGGACGGCTTCCGCCGCTACTATCTC
ATGGGCATGGCCTGGTTCGTCGGCGCCGCCCTCCTGTGCGCCATCGTCTACACCCCTCCTGAGACGGCGGCCCAG
AGGCTGTATCGCGGCCGCACCGCCGACAAGCTCAAGATGCTCGACTGGGTCGGCTACCTGCTCCTGGCCGCCGGC
CTCGTCCTCTTCTGCGTCGGCCTGTCTCTCTCCCAGAACCCCTACCCGTGGACGGACCCGAAAGTGTCCGCCACG
TTCGCCACCGGCATAGTCCTAGCTTTTTGTCTCGTCGGCTACGAGACCTTCGTTAAGCGCGACGGCATGTTCCAC
CACGGCCTGTTCACTCGCGACCGCAATTTCTCCATCGCCTTATTCTGTGTTTTTGCCGAGGGCATGGCGTTCTTC
GCCGCAAACATCTACTTCGCGTTCGAAGTCAGCGTCCTATACGAGACTGATGCCGTCCTTGTTGGGACGCGCTAC
GGCATCATGCTTGTCTGCTCCATGGTCGGCGCCGCGCTCGCTGGACTGTACTGCGATATTACTCGCCGCGTGCGC
TGGGCAACTGTCCTGGCCTTCGTCATCTTTGTCGTCTTCTTTTCTTGCATGGCCATTGCCGATCGTCACTCTAAC
ACGGCCGTCTGGGGGTATCCTGTGCTTCTGGGATTTGCACTCGGCATCACGTTGACGACCCTCGTCACCGTCTGC
CAGCTATCGCCGGCCCCTGAACTGATAGCCATTGCCTCCGGCCTGGTCATAAGTGTACGGTCTCTCGGTGGCACG
GTTGGCATCGCCATCTGGAATTCCCTCTTCACCTCTCAGATGAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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