Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5956
Gene name
LocationContig_30:49290..49917
Strand+
Gene length (bp)627
Transcript length (bp)627
Coding sequence length (bp)627
Protein length (aa) 209

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13649 Methyltransf_25 Methyltransferase domain 3.1E-13 62 152
PF08241 Methyltransf_11 Methyltransferase domain 9.7E-12 63 155
PF13489 Methyltransf_23 Methyltransferase domain 2.2E-10 56 196
PF13847 Methyltransf_31 Methyltransferase domain 5.6E-08 59 160
PF06325 PrmA Ribosomal protein L11 methyltransferase (PrmA) 1.7E-07 45 127
PF05175 MTS Methyltransferase small domain 3.5E-07 43 109

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8N6F8|WBS27_HUMAN Williams-Beuren syndrome chromosomal region 27 protein OS=Homo sapiens GN=WBSCR27 PE=1 SV=2 2 158 7.0E-22
sp|A7GHH4|PRMA_CLOBL Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|B1ILM1|PRMA_CLOBK Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|C1FVT8|PRMA_CLOBJ Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|A5I638|PRMA_CLOBH Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=prmA PE=3 SV=1 45 157 7.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|Q8N6F8|WBS27_HUMAN Williams-Beuren syndrome chromosomal region 27 protein OS=Homo sapiens GN=WBSCR27 PE=1 SV=2 2 158 7.0E-22
sp|A7GHH4|PRMA_CLOBL Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|B1ILM1|PRMA_CLOBK Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Okra / Type B1) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|C1FVT8|PRMA_CLOBJ Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|A5I638|PRMA_CLOBH Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|A7FXL3|PRMA_CLOB1 Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|A6LRN8|PRMA_CLOB8 Ribosomal protein L11 methyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=prmA PE=3 SV=1 45 157 7.0E-07
sp|B1KZN5|PRMA_CLOBM Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=prmA PE=3 SV=1 44 157 7.0E-07
sp|Q482G8|UBIG_COLP3 Ubiquinone biosynthesis O-methyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=ubiG PE=3 SV=1 38 193 3.0E-06
sp|C3L3G5|PRMA_CLOB6 Ribosomal protein L11 methyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=prmA PE=3 SV=1 44 111 3.0E-06
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GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0016740 transferase activity No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal|Nuclear export signal 0.8377 0.4497 0.0978 0.1316 0.2118 0.2044 0.0508 0.1248 0.4123 0.005

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7641
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|5956 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5956
MANIARAYGLASTAEARSLYDEWAATFDEEMASASQDYVAPAIATKCLVDSLKSQNLTDIKILDAGCGTGLVGAH
LAKLGAKHIDGVDLSPGMLEVARQTGNYKSLKTADLSQPLDCPSNTYQVVMCIGTLTQGHVGPEVLFDFARAVEQ
GGLVIATVLSTIWESGGYSDAVTRMVRERKVSLVSDEIEDYRRGAGVQARMVILRVLS*
Coding >Hirsu2|5956
ATGGCCAATATTGCACGTGCGTACGGCCTGGCAAGCACGGCAGAAGCCAGGTCACTCTACGACGAATGGGCTGCC
ACCTTTGACGAAGAAATGGCTTCGGCCTCCCAAGATTACGTCGCTCCAGCAATCGCCACCAAGTGTCTGGTGGAC
AGCCTGAAATCGCAAAACTTGACGGATATCAAGATCCTCGACGCAGGCTGCGGCACTGGCCTTGTTGGCGCGCAC
CTCGCCAAGCTAGGCGCGAAACATATCGATGGTGTCGACTTGAGCCCCGGCATGCTCGAAGTCGCACGACAGACC
GGCAACTATAAGTCTTTAAAGACGGCGGATCTGTCTCAGCCCCTCGACTGTCCAAGCAATACTTACCAGGTAGTC
ATGTGCATTGGGACCCTGACTCAAGGCCATGTCGGGCCCGAGGTCTTATTCGATTTCGCTCGTGCCGTCGAGCAG
GGCGGGCTTGTCATCGCAACAGTTCTCTCGACGATCTGGGAAAGTGGAGGCTACAGTGATGCAGTGACCAGGATG
GTGCGAGAACGCAAGGTGAGCTTGGTGAGCGATGAGATCGAGGACTATCGGCGTGGGGCCGGAGTGCAGGCTCGC
ATGGTAATACTCAGGGTGCTTTCGTAG
Transcript >Hirsu2|5956
ATGGCCAATATTGCACGTGCGTACGGCCTGGCAAGCACGGCAGAAGCCAGGTCACTCTACGACGAATGGGCTGCC
ACCTTTGACGAAGAAATGGCTTCGGCCTCCCAAGATTACGTCGCTCCAGCAATCGCCACCAAGTGTCTGGTGGAC
AGCCTGAAATCGCAAAACTTGACGGATATCAAGATCCTCGACGCAGGCTGCGGCACTGGCCTTGTTGGCGCGCAC
CTCGCCAAGCTAGGCGCGAAACATATCGATGGTGTCGACTTGAGCCCCGGCATGCTCGAAGTCGCACGACAGACC
GGCAACTATAAGTCTTTAAAGACGGCGGATCTGTCTCAGCCCCTCGACTGTCCAAGCAATACTTACCAGGTAGTC
ATGTGCATTGGGACCCTGACTCAAGGCCATGTCGGGCCCGAGGTCTTATTCGATTTCGCTCGTGCCGTCGAGCAG
GGCGGGCTTGTCATCGCAACAGTTCTCTCGACGATCTGGGAAAGTGGAGGCTACAGTGATGCAGTGACCAGGATG
GTGCGAGAACGCAAGGTGAGCTTGGTGAGCGATGAGATCGAGGACTATCGGCGTGGGGCCGGAGTGCAGGCTCGC
ATGGTAATACTCAGGGTGCTTTCGTAG
Gene >Hirsu2|5956
ATGGCCAATATTGCACGTGCGTACGGCCTGGCAAGCACGGCAGAAGCCAGGTCACTCTACGACGAATGGGCTGCC
ACCTTTGACGAAGAAATGGCTTCGGCCTCCCAAGATTACGTCGCTCCAGCAATCGCCACCAAGTGTCTGGTGGAC
AGCCTGAAATCGCAAAACTTGACGGATATCAAGATCCTCGACGCAGGCTGCGGCACTGGCCTTGTTGGCGCGCAC
CTCGCCAAGCTAGGCGCGAAACATATCGATGGTGTCGACTTGAGCCCCGGCATGCTCGAAGTCGCACGACAGACC
GGCAACTATAAGTCTTTAAAGACGGCGGATCTGTCTCAGCCCCTCGACTGTCCAAGCAATACTTACCAGGTAGTC
ATGTGCATTGGGACCCTGACTCAAGGCCATGTCGGGCCCGAGGTCTTATTCGATTTCGCTCGTGCCGTCGAGCAG
GGCGGGCTTGTCATCGCAACAGTTCTCTCGACGATCTGGGAAAGTGGAGGCTACAGTGATGCAGTGACCAGGATG
GTGCGAGAACGCAAGGTGAGCTTGGTGAGCGATGAGATCGAGGACTATCGGCGTGGGGCCGGAGTGCAGGCTCGC
ATGGTAATACTCAGGGTGCTTTCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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