Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5953
Gene name
LocationContig_30:34264..35869
Strand+
Gene length (bp)1605
Transcript length (bp)1236
Coding sequence length (bp)1236
Protein length (aa) 412

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 3.1E-52 22 407

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 21 411 1.0E-55
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 8 411 1.0E-46
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 9 411 5.0E-40
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 4 411 1.0E-28
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 215 411 3.0E-25
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Swissprot ID Swissprot Description Start End E-value
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 21 411 1.0E-55
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 8 411 1.0E-46
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 9 411 5.0E-40
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 4 411 1.0E-28
sp|Q8W246|ZIP7_ARATH Zinc transporter 7 OS=Arabidopsis thaliana GN=ZIP7 PE=2 SV=1 215 411 3.0E-25
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 238 411 1.0E-24
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 259 411 2.0E-24
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 231 411 3.0E-24
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 108 411 5.0E-24
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 259 411 5.0E-23
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 241 411 8.0E-22
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 246 411 3.0E-21
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 259 411 7.0E-21
sp|O64738|ZIP6_ARATH Zinc transporter 6, chloroplastic OS=Arabidopsis thaliana GN=ZIP6 PE=3 SV=1 239 411 1.0E-20
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 259 411 3.0E-20
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 240 411 1.0E-19
sp|Q6L8F9|ZIP6_ORYSJ Zinc transporter 6 OS=Oryza sativa subsp. japonica GN=ZIP6 PE=2 SV=1 251 411 1.0E-19
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 259 411 1.0E-16
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 201 411 2.0E-16
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 251 411 3.0E-16
sp|Q5Z653|ZIP10_ORYSJ Zinc transporter 10 OS=Oryza sativa subsp. japonica GN=ZIP10 PE=3 SV=2 259 380 9.0E-16
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 259 411 1.0E-15
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 259 411 2.0E-15
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 247 411 1.0E-14
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 2 152 1.0E-13
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 234 411 1.0E-13
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 1 172 1.0E-12
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 285 411 2.0E-12
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 7 172 5.0E-12
sp|O81123|ZIP1_ARATH Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1 11 147 5.0E-12
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 14 172 7.0E-11
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 2 137 1.0E-10
sp|Q7XLD4|ZIP3_ORYSJ Zinc transporter 3 OS=Oryza sativa subsp. japonica GN=ZIP3 PE=1 SV=2 2 143 1.0E-09
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 2 164 2.0E-09
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 21 89 4.0E-09
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 7 128 1.0E-08
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 29 113 5.0E-08
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 29 113 5.0E-08
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 3 145 6.0E-08
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 4 90 1.0E-07
sp|Q6ZJ91|ZIP4_ORYSJ Zinc transporter 4 OS=Oryza sativa subsp. japonica GN=ZIP4 PE=2 SV=1 13 103 2.0E-07
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 4 134 3.0E-07
sp|Q6L8F7|ZIP7_ORYSJ Zinc transporter 7 OS=Oryza sativa subsp. japonica GN=ZIP7 PE=2 SV=1 5 117 8.0E-06
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0030001 metal ion transport Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0008324 cation transmembrane transporter activity No
GO:0008150 biological_process No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0006812 cation transport No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0022857 transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 62 84 22
3 99 118 19
4 269 291 22
5 313 335 22
6 347 369 22
7 391 410 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5953
MAEPKPQCGGKQENAEYDLPLHVAGLFLVLAASCIGCGFPVAAKKIKWMKIPPKIFFACKHFGTGVLIATAFVHL
LPTAFQSLGNPCLPDLFTDDYPPLPGVIMMASLFCLFVIEMVLNAKTGGHSHGGPTGENIDHAHGHGHGHAHPLP
SSGPPNYPRDVKDDVQVLNLPVEQRQPPDIRAVKSVLSTMPAWFVVFYEQYVRQHNQMLEMINSNGSNSSFSTKE
RDRDSVSVAEVYTDEENQVVDPAEFKKMSTNITLLEGGILFHSVFVGMTVSITIDGFVVLLIAILFHQMFEGLGL
GSRIAAVPYPKGSIRPWVLVFAFGTTAPIGQAIGLFTRNSYDPESAFGLIIVGIFNAISSGLLIYAALVDLLAED
FLSEEANRLMNGKKKIMAFCWVLAGATGMSIVGAFA*
Coding >Hirsu2|5953
ATGGCTGAGCCAAAGCCTCAGTGTGGGGGGAAGCAAGAAAATGCCGAGTACGATCTGCCATTGCACGTAGCAGGG
CTCTTCTTGGTATTGGCGGCATCATGCATCGGATGTGGTTTCCCCGTTGCCGCAAAGAAGATCAAGTGGATGAAG
ATTCCGCCCAAGATCTTCTTCGCTTGCAAGCACTTTGGTACGGGCGTTCTCATAGCTACCGCCTTCGTACATCTT
CTCCCCACGGCCTTCCAGAGTCTGGGAAACCCATGCCTTCCCGATCTCTTCACTGATGACTACCCGCCACTCCCT
GGTGTCATCATGATGGCATCTCTTTTCTGTTTGTTCGTCATTGAGATGGTGCTCAACGCGAAGACGGGCGGACAC
TCGCACGGCGGTCCGACTGGCGAAAACATCGATCACGCCCACGGCCACGGCCACGGTCACGCTCATCCACTGCCC
TCGTCTGGCCCGCCCAACTACCCTCGGGACGTGAAGGACGATGTGCAAGTCTTGAATCTGCCCGTGGAACAAAGG
CAGCCACCCGACATTAGGGCGGTTAAGAGCGTCTTGTCGACCATGCCCGCGTGGTTCGTCGTCTTTTACGAACAA
TACGTCCGTCAGCACAACCAAATGCTCGAAATGATCAACTCCAACGGCTCCAATTCTTCATTCTCAACCAAGGAG
CGGGACAGGGATTCGGTGTCGGTAGCCGAGGTCTATACGGATGAGGAAAACCAGGTCGTGGATCCAGCCGAATTC
AAGAAGATGTCGACCAACATCACATTGTTGGAGGGTGGTATTCTCTTCCATTCCGTGTTCGTGGGCATGACAGTT
TCTATCACGATCGATGGATTCGTCGTTCTGCTCATCGCCATCTTGTTCCATCAGATGTTCGAAGGCCTGGGCCTG
GGCTCTCGAATCGCTGCCGTGCCCTATCCCAAAGGAAGCATTCGGCCATGGGTCTTGGTATTTGCCTTTGGAACA
ACGGCGCCCATTGGGCAGGCCATCGGCTTGTTTACTCGAAACTCATACGACCCCGAGAGCGCCTTTGGCCTCATC
ATCGTTGGTATTTTCAACGCCATCTCGTCGGGTCTACTTATCTACGCTGCCTTGGTCGATCTCCTGGCCGAGGAC
TTCTTGTCCGAAGAAGCGAATCGACTGATGAACGGCAAAAAGAAGATCATGGCATTTTGCTGGGTCCTTGCGGGA
GCCACCGGCATGTCTATCGTCGGAGCTTTCGCTTAG
Transcript >Hirsu2|5953
ATGGCTGAGCCAAAGCCTCAGTGTGGGGGGAAGCAAGAAAATGCCGAGTACGATCTGCCATTGCACGTAGCAGGG
CTCTTCTTGGTATTGGCGGCATCATGCATCGGATGTGGTTTCCCCGTTGCCGCAAAGAAGATCAAGTGGATGAAG
ATTCCGCCCAAGATCTTCTTCGCTTGCAAGCACTTTGGTACGGGCGTTCTCATAGCTACCGCCTTCGTACATCTT
CTCCCCACGGCCTTCCAGAGTCTGGGAAACCCATGCCTTCCCGATCTCTTCACTGATGACTACCCGCCACTCCCT
GGTGTCATCATGATGGCATCTCTTTTCTGTTTGTTCGTCATTGAGATGGTGCTCAACGCGAAGACGGGCGGACAC
TCGCACGGCGGTCCGACTGGCGAAAACATCGATCACGCCCACGGCCACGGCCACGGTCACGCTCATCCACTGCCC
TCGTCTGGCCCGCCCAACTACCCTCGGGACGTGAAGGACGATGTGCAAGTCTTGAATCTGCCCGTGGAACAAAGG
CAGCCACCCGACATTAGGGCGGTTAAGAGCGTCTTGTCGACCATGCCCGCGTGGTTCGTCGTCTTTTACGAACAA
TACGTCCGTCAGCACAACCAAATGCTCGAAATGATCAACTCCAACGGCTCCAATTCTTCATTCTCAACCAAGGAG
CGGGACAGGGATTCGGTGTCGGTAGCCGAGGTCTATACGGATGAGGAAAACCAGGTCGTGGATCCAGCCGAATTC
AAGAAGATGTCGACCAACATCACATTGTTGGAGGGTGGTATTCTCTTCCATTCCGTGTTCGTGGGCATGACAGTT
TCTATCACGATCGATGGATTCGTCGTTCTGCTCATCGCCATCTTGTTCCATCAGATGTTCGAAGGCCTGGGCCTG
GGCTCTCGAATCGCTGCCGTGCCCTATCCCAAAGGAAGCATTCGGCCATGGGTCTTGGTATTTGCCTTTGGAACA
ACGGCGCCCATTGGGCAGGCCATCGGCTTGTTTACTCGAAACTCATACGACCCCGAGAGCGCCTTTGGCCTCATC
ATCGTTGGTATTTTCAACGCCATCTCGTCGGGTCTACTTATCTACGCTGCCTTGGTCGATCTCCTGGCCGAGGAC
TTCTTGTCCGAAGAAGCGAATCGACTGATGAACGGCAAAAAGAAGATCATGGCATTTTGCTGGGTCCTTGCGGGA
GCCACCGGCATGTCTATCGTCGGAGCTTTCGCTTAG
Gene >Hirsu2|5953
ATGGCTGAGCCAAAGCCTCAGTGTGGGGGGAAGCAAGAAAATGCCGAGTACGATCTGCCATTGCACGTAGCAGGG
CTCTGTGAGTACCCGGAAGCGAAGCCACGATTACAATTATCGGCGACGACATGAGCTGACCATGACGTGACCAGT
CTTGGTATTGGCGGCATCATGCATCGGTATGCGAATGTTCGAAAAATTTTTTATCGCGGCCTGACGACTGAACTG
ACATGAATCTGGTAGGATGTGGTTTCCCCGTTGCCGCAAAGAAGATCAAGTGGATGAAGATTCCGCCCAAGATCT
TCTTCGCTTGCAAGCACTTTGGTACGGGCGTTCTCATAGCTACCGCCTTCGTACATGTACGCCATCGCCCACGGA
CTGCGAATCAACCCCATTCTCGTCTGAGCCTTCACTGACAACTTTGACAGCTTCTCCCCACGGCCTTCCAGAGTC
TGGGAAACCCATGCCTTCCCGATCTCTTCACTGATGACTACCCGCCACTCCCTGGTGTCATCATGATGGCATCTC
TTTTCTGTTTGTTCGTCATTGAGATGGTGCTCAACGCGAAGACGGGCGGACACTCGCACGGCGGTCCGACTGGCG
AAAACATCGATCACGCCCACGGCCACGGCCACGGTCACGCTCATCCACTGCCCTCGTCTGGCCCGCCCAACTACC
CTCGGGACGTGAAGGACGATGTGCAAGTCTTGAATCTGCCCGTGGAACAAAGGCAGCCACCCGACATTAGGGCGG
TTAAGAGCGTGTACGAGAGGCAGCCGCCTTCAAGCGTGTACGAAGACAGTAACAAGCGGGACAGCTTGTCGACCA
TGCCCGCGTGGTTCGTCGTCTTTTACGAACAATACGTCCGTCAGCACAACCAAATGCTCGAAATGATCAACTCCA
ACGGCTCCAATTCTTCATTCTCAACCAAGGAGCGGGACAGGGATTCGGTGTCGGTAGCCGAGGTCTATACGGATG
AGGAAAACCAGGTCGTGGATCCAGCCGAATTCAAGAAGATGTCGACCAACATCACATTGTTGGAGGGTGGTATTC
TCTTCCATTCCGTGTTCGTGGGCATGACAGTTTCTATCACGATCGATGGATTCGTCGTTCTGCTCATCGCCATCT
TGTTCCATCAGATGTTCGAAGGCCTGGGCCTGGGCTCTCGAATCGCTGCCGTGCCCTATCCCAAAGGAAGCATTC
GGCCATGGGTCTTGGTATTTGCCTTTGGAACAACGGCGCCCATTGGGCAGGCCATCGGCTTGTTTACTCGAAACT
CATACGACCCCGAGAGCGCCTTTGGCCTCATCATCGTTGGTATTTTCAACGCCATGTGAGTGTTTTATCTTTTCA
AAACCAGTAATCCTTGCGCTAACCTCGCACAGCTCGTCGGGTCTACTTATCTACGCTGCCTTGGTCGATCTCCTG
GCCGAGGACTTCTTGTCCGAAGAAGCGAATCGACTGATGAACGGCAAAAAGAAGATCATGGCATTTTGCTGGGTC
CTTGCGGGAGGTGAGCGAGACCCACCCTGACCAAGTTCAACTTCATTTTGCTGATATCTGGCTTTTCCAGCCACC
GGCATGTCTATCGTCGGAGCTTTCGCTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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