Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5938
Gene name
LocationContig_3:90159..91869
Strand-
Gene length (bp)1710
Transcript length (bp)1371
Coding sequence length (bp)1371
Protein length (aa) 457

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 2.5E-28 6 398
PF00083 Sugar_tr Sugar (and other) transporter 2.7E-10 28 165

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94343|YHMA_SCHPO Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 10 452 1.0E-48
sp|P53389|HOL1_YEAST Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 260 439 6.0E-23
sp|P53389|HOL1_YEAST Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 18 166 2.0E-14
sp|P38227|QDR3_YEAST Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 218 423 4.0E-13
sp|O59814|YCT4_SCHPO Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 24 445 2.0E-12
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Swissprot ID Swissprot Description Start End E-value
sp|O94343|YHMA_SCHPO Uncharacterized MFS-type transporter C1271.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1271.10c PE=1 SV=1 10 452 1.0E-48
sp|P53389|HOL1_YEAST Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 260 439 6.0E-23
sp|P53389|HOL1_YEAST Protein HOL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOL1 PE=1 SV=1 18 166 2.0E-14
sp|P38227|QDR3_YEAST Quinidine resistance protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=QDR3 PE=1 SV=2 218 423 4.0E-13
sp|O59814|YCT4_SCHPO Uncharacterized transporter C794.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.04c PE=3 SV=1 24 445 2.0E-12
sp|Q59XM0|QDR3_CANAL MFS antiporter QDR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR3 PE=2 SV=1 6 159 7.0E-11
sp|P33532|BSU1_SCHPO Vitamin B6 transporter bsu1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bsu1 PE=3 SV=2 11 156 1.0E-10
sp|P38776|YHK8_YEAST Probable drug/proton antiporter YHK8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHK8 PE=1 SV=1 10 441 4.0E-10
sp|Q07824|TPO1_YEAST Polyamine transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO1 PE=1 SV=1 29 441 3.0E-09
sp|Q9USN4|YJA1_SCHPO Uncharacterized transporter C1529.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1529.01 PE=3 SV=2 35 440 4.0E-09
sp|O43081|YHS6_SCHPO Uncharacterized MFS-type transporter C947.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC947.06c PE=3 SV=1 10 441 1.0E-07
sp|Q9P3V5|YI45_SCHPO Uncharacterized transporter C1348.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1348.05 PE=3 SV=1 10 375 3.0E-07
sp|Q10084|MFS2_SCHPO Uncharacterized transporter mfs2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfs2 PE=3 SV=1 31 440 4.0E-07
sp|Q9P3E8|YLZ2_SCHPO Uncharacterized transporter C750.02c/PB2B2.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC750.02c PE=3 SV=1 10 375 4.0E-07
sp|Q9HDX4|MFC1_SCHPO Uncharacterized transporter mfc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfc1 PE=3 SV=2 28 360 1.0E-06
sp|Q59XM0|QDR3_CANAL MFS antiporter QDR3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=QDR3 PE=2 SV=1 189 418 6.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 23 45 22
2 67 89 22
3 110 132 22
4 142 161 19
5 230 252 22
6 272 294 22
7 315 334 19
8 349 371 22
9 378 400 22
10 413 435 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5938
MYIQRPVFWSQMLRELDITQEDLNVAQALQLVGTAVGCILLVPFAKKYGRRPTYIISVALVTGATLWSAYMTTAT
EIILSNVLMGLAGATNETATQMSIRDMFFVHQRGSANGLYLIAIAAGAFLAPMAAGIHASISGWRSSYFLLGYFM
IILLVLFILTFEETKYVPAPSGTTKDYYGADSKLGSIEYEASVRDKIRQRPPFPRYLRLQLITRTNESLWKTFFY
PIHAIWYPHIIFTYLEFASGVCWFVVVSSIAAIVFARPPYSFNPAQVGLMFGGPLIGSLIGSLYGGLLVDWAIIR
FAIRNKGIFEPEMRLWLVPVPALAMSAGLVIFGVTADRFSPKGMHWAFPSIGGGLFAFGFGGISDISFTLVIDSF
PNIVAQSFVVIAFFRNTISIAGPFSISPWLEAMSVSEMFITAGCISLGIHLTALPLVFWGKRARAKIAPHYQRLA
ERATSV*
Coding >Hirsu2|5938
ATGTATATTCAGCGCCCAGTCTTTTGGTCGCAGATGCTTCGAGAGCTGGACATCACACAGGAAGACCTGAATGTT
GCCCAGGCCCTTCAGCTAGTTGGAACGGCTGTAGGGTGTATCTTACTGGTCCCCTTTGCTAAGAAATATGGTCGA
CGTCCGACCTATATTATCTCTGTTGCCTTGGTCACTGGCGCGACGCTATGGTCCGCCTATATGACCACGGCAACG
GAGATAATTCTAAGCAATGTTCTGATGGGCCTAGCTGGTGCCACCAATGAGACGGCCACGCAGATGAGCATCCGC
GATATGTTTTTCGTCCATCAGCGAGGCTCAGCTAACGGCCTATACTTGATTGCCATCGCAGCGGGTGCCTTCCTC
GCCCCTATGGCTGCCGGTATTCACGCGTCAATCTCCGGCTGGCGGTCTTCTTATTTTTTATTAGGCTATTTTATG
ATCATCCTCCTTGTTCTGTTTATCCTTACATTTGAGGAAACTAAATACGTTCCTGCTCCGTCGGGAACTACGAAG
GACTATTATGGCGCAGACTCCAAGCTGGGCTCAATCGAGTACGAAGCCTCTGTCCGAGATAAAATTCGGCAACGC
CCGCCGTTCCCACGATACCTAAGGCTTCAGCTTATAACCCGCACAAACGAGTCGCTCTGGAAGACGTTTTTTTAC
CCTATACACGCTATATGGTATCCTCATATCATTTTTACCTACCTTGAATTCGCTTCCGGTGTTTGTTGGTTCGTT
GTCGTCTCTTCGATTGCTGCTATCGTCTTTGCAAGGCCGCCGTATAGCTTTAACCCCGCCCAAGTCGGCTTAATG
TTTGGGGGACCCCTGATCGGCTCTCTGATCGGAAGCTTATACGGCGGCCTTCTTGTCGATTGGGCAATTATCCGA
TTTGCAATACGGAATAAAGGTATTTTTGAGCCGGAAATGCGTTTATGGCTCGTACCAGTCCCGGCTCTAGCTATG
TCGGCTGGTCTTGTCATTTTTGGCGTCACGGCTGATCGGTTCTCGCCCAAGGGTATGCATTGGGCCTTCCCTAGC
ATCGGTGGCGGCCTGTTTGCGTTTGGCTTTGGCGGTATCTCAGATATATCTTTCACTCTCGTGATCGACTCCTTC
CCTAACATCGTCGCCCAATCGTTCGTCGTTATCGCGTTCTTTCGAAATACTATCAGTATTGCTGGACCGTTTTCA
ATCTCTCCCTGGTTGGAAGCGATGAGTGTTAGCGAGATGTTCATCACCGCCGGCTGTATCAGTCTGGGCATTCAC
CTTACCGCTCTGCCCCTTGTTTTCTGGGGCAAGAGAGCCCGCGCTAAAATTGCGCCGCATTACCAACGCCTTGCC
GAGAGGGCCACGTCTGTTTGA
Transcript >Hirsu2|5938
ATGTATATTCAGCGCCCAGTCTTTTGGTCGCAGATGCTTCGAGAGCTGGACATCACACAGGAAGACCTGAATGTT
GCCCAGGCCCTTCAGCTAGTTGGAACGGCTGTAGGGTGTATCTTACTGGTCCCCTTTGCTAAGAAATATGGTCGA
CGTCCGACCTATATTATCTCTGTTGCCTTGGTCACTGGCGCGACGCTATGGTCCGCCTATATGACCACGGCAACG
GAGATAATTCTAAGCAATGTTCTGATGGGCCTAGCTGGTGCCACCAATGAGACGGCCACGCAGATGAGCATCCGC
GATATGTTTTTCGTCCATCAGCGAGGCTCAGCTAACGGCCTATACTTGATTGCCATCGCAGCGGGTGCCTTCCTC
GCCCCTATGGCTGCCGGTATTCACGCGTCAATCTCCGGCTGGCGGTCTTCTTATTTTTTATTAGGCTATTTTATG
ATCATCCTCCTTGTTCTGTTTATCCTTACATTTGAGGAAACTAAATACGTTCCTGCTCCGTCGGGAACTACGAAG
GACTATTATGGCGCAGACTCCAAGCTGGGCTCAATCGAGTACGAAGCCTCTGTCCGAGATAAAATTCGGCAACGC
CCGCCGTTCCCACGATACCTAAGGCTTCAGCTTATAACCCGCACAAACGAGTCGCTCTGGAAGACGTTTTTTTAC
CCTATACACGCTATATGGTATCCTCATATCATTTTTACCTACCTTGAATTCGCTTCCGGTGTTTGTTGGTTCGTT
GTCGTCTCTTCGATTGCTGCTATCGTCTTTGCAAGGCCGCCGTATAGCTTTAACCCCGCCCAAGTCGGCTTAATG
TTTGGGGGACCCCTGATCGGCTCTCTGATCGGAAGCTTATACGGCGGCCTTCTTGTCGATTGGGCAATTATCCGA
TTTGCAATACGGAATAAAGGTATTTTTGAGCCGGAAATGCGTTTATGGCTCGTACCAGTCCCGGCTCTAGCTATG
TCGGCTGGTCTTGTCATTTTTGGCGTCACGGCTGATCGGTTCTCGCCCAAGGGTATGCATTGGGCCTTCCCTAGC
ATCGGTGGCGGCCTGTTTGCGTTTGGCTTTGGCGGTATCTCAGATATATCTTTCACTCTCGTGATCGACTCCTTC
CCTAACATCGTCGCCCAATCGTTCGTCGTTATCGCGTTCTTTCGAAATACTATCAGTATTGCTGGACCGTTTTCA
ATCTCTCCCTGGTTGGAAGCGATGAGTGTTAGCGAGATGTTCATCACCGCCGGCTGTATCAGTCTGGGCATTCAC
CTTACCGCTCTGCCCCTTGTTTTCTGGGGCAAGAGAGCCCGCGCTAAAATTGCGCCGCATTACCAACGCCTTGCC
GAGAGGGCCACGTCTGTTTGA
Gene >Hirsu2|5938
ATGTATATTCAGCGCGTAAGTTTCGATTTGTCGGATACCCAAAGCCCTTTTTCCACACTTCTAAAATTTGTTTCG
GCATATAGATTAGCAACACAGCCAGTCTTTTGGTCGCAGATGCTTCGAGAGCTGGACATCACACAGGAAGACCTG
AATGTTGCCCAGGCCCTTCAGCTAGTTGGAACGGCTGTAGGGTGTATCTTACTGGTCCCCTTTGCTAAGAAATAT
GGTCGACGTCCGACCTATATTATCTCTGTTGCCTTGGTCACTGGCGCGACGCTATGGTCCGCCTATATGACCACG
GCAACGGAGATAATTCTAAGCAATGTTCTGATGGGCCTAGCTGGTGCCACCAATGAGACGGCCACGCAGATGAGC
GTACGTCTCCCACCTTGATCTTCACCGCTTTACAGTGCCTTGGACAAACATCATTATCAGCGGTAACCGATTCTA
ATTACATACTCGCCTGTTTCCAGATCCGCGATATGTTTTTCGTCCATCAGCGAGGCTCAGCTAACGGCCTATACT
TGATTGCCATCGCAGCGGGTGCCTTCCTCGCCCCTATGGCTGCCGGTATTCACGCGTCAATCTCCGGCTGGCGGT
CTTCTTATTTTTTATTAGGCTATTTTATGATCATCCTCCTTGTTCTGTTTATCCTTACATTTGAGGAAACTAAAT
ACGTTCCTGCTCCGTCGGGAACTACGAAGGACTATTATGGCGCAGACTCCAAGCTGGGCTCAATCGAGTACGAAG
CCTCTGTCCGAGATAAAATTCGGCAACGCCCGCCGTTCCCACGATACCTAAGGCTTCAGCTTATAACCCGCACAA
ACGAGTCGCTCTGGAAGACGTTTTTTTACCCTATACACGCTATATGGTATCCTCATATCATTTTTACCTACCTTG
AATTCGCTTCCGGTGTTTGTTGGTTCGTTGTCGTCTCTTCGATTGCTGCTATCGTCTTTGCAAGGCCGCCGTATA
GCTTTAACCCCGCCCAAGTCGGCTTAATGTTTGGGGGACCCCTGATCGGCTCTCTGATCGGAAGCTTATACGGCG
GCCTTCTTGTCGATTGGGCAATTATCCGATTTGCAATACGGAATAAAGGTATTTTTGAGCCGGAAATGCGTTTAT
GGCTCGTACCAGTCCCGGCTCTAGCTATGTCGGCTGGTCTTGTCATTTTTGGCGTCACGGCTGATCGGGTAAGAC
TATCCCCGTCCCTTACCTAAATGGTTTGTTGCTTTCACTAACTAGTTCTCGCCCAAGGGTATGCATTGGGCCTTC
CCTAGCATCGGTGGCGGCCTGTTTGCGTTTGGCTTTGGCGGTATCTCAGATATATCTTTCACTCTCGTGATCGAC
TCCTTCCCTAACGTGAGTGCAACCGTTTTCTTAACTTCTGTTTTTTTTCTCATGTCTTTTAAGACGCCCATGGTC
GAAAATGTATCTACCATTGAAGGCTAACGTTAAAGGGAACCTTAGATCGTCGCCCAATCGTTCGTCGTTATCGCG
TTCTTTCGAAATACTATCAGTATTGCTGGACCGTTTTCAATCTCTCCCTGGTTGGAAGCGATGAGTGTTAGCGAG
ATGTTCATCACCGCCGGCTGTATCAGTCTGGGCATTCACCTTACCGCTCTGCCCCTTGTTTTCTGGGGCAAGAGA
GCCCGCGCTAAAATTGCGCCGCATTACCAACGCCTTGCCGAGAGGGCCACGTCTGTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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