Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5936
Gene name
LocationContig_3:84199..85386
Strand+
Gene length (bp)1187
Transcript length (bp)843
Coding sequence length (bp)843
Protein length (aa) 281

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01965 DJ-1_PfpI DJ-1/PfpI family 3.8E-19 41 221

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1 35 243 6.0E-23
sp|Q9V1F8|PFPI_PYRAB Intracellular protease 1 OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=pfpI PE=3 SV=1 50 224 2.0E-08
sp|O59413|PFPI_PYRHO Intracellular protease 1 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=pfpI PE=1 SV=1 52 224 3.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Endoplasmic reticulum Signal peptide 0.1839 0.0602 0.8059 0.0722 0.1866 0.0485 0.6328 0.5034 0.3169 0.0113

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999418

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7074
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|4774
Ophiocordyceps subramaniannii Hirsu2|5936 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5936
MARLQRAFFLFCIPGLLAAVGARETEGQWCKAGHSLSLGISVFPGFEPLDVFGPLEVFYALSYHRNVSLAVIAKE
KGLVSSRPPFKTGSKNATNGYENALGPRIEATHSFSEAPVLDVLLVPGGRGTSALEQANDTSVEDFIKSTFGQLD
FLLSVCTGAVSLAKAGVLSGRRATTNKSVWKAATNHGKNVTWVPTARWVEDGNIWTSSGVSAGIDMTYAFLRRLY
GDGDEILKSVMNEIEYAPHTKADWDPFSVVHKVPGANTMASLADSTTPVGYDENS*
Coding >Hirsu2|5936
ATGGCCAGATTGCAACGTGCTTTCTTCCTCTTCTGTATTCCGGGCTTACTCGCCGCTGTGGGGGCTAGAGAGACT
GAGGGACAATGGTGCAAAGCCGGGCATTCTCTCTCTCTTGGCATTTCAGTGTTTCCCGGATTCGAGCCTCTCGAT
GTCTTCGGCCCCCTGGAAGTATTCTACGCGTTATCCTATCATCGTAATGTATCCCTTGCGGTAATCGCAAAAGAA
AAGGGACTGGTGAGCTCCCGTCCACCTTTCAAGACAGGGTCGAAAAATGCAACGAACGGCTACGAAAATGCTCTG
GGGCCAAGAATAGAGGCTACGCATTCCTTTTCCGAAGCTCCAGTACTGGATGTCCTGCTTGTGCCGGGAGGTCGC
GGAACCAGTGCCCTTGAGCAGGCAAACGACACCTCAGTCGAGGACTTTATCAAAAGCACCTTTGGTCAGTTGGAC
TTCCTACTCAGCGTTTGCACTGGGGCTGTCAGCTTAGCCAAAGCCGGCGTGCTTTCCGGCCGTCGAGCGACGACA
AACAAGAGCGTTTGGAAAGCGGCTACAAATCATGGGAAAAACGTCACCTGGGTGCCTACAGCCCGCTGGGTTGAA
GACGGAAACATTTGGACGAGCTCTGGAGTCTCCGCTGGGATAGATATGACCTACGCCTTTCTCAGGCGTTTATAC
GGCGACGGCGACGAGATTTTGAAGAGCGTTATGAACGAGATAGAATACGCGCCTCACACGAAAGCGGACTGGGAC
CCGTTTTCAGTAGTTCATAAGGTCCCCGGCGCGAACACGATGGCAAGTTTAGCCGACTCAACCACACCGGTTGGG
TACGATGAAAACTCTTAA
Transcript >Hirsu2|5936
ATGGCCAGATTGCAACGTGCTTTCTTCCTCTTCTGTATTCCGGGCTTACTCGCCGCTGTGGGGGCTAGAGAGACT
GAGGGACAATGGTGCAAAGCCGGGCATTCTCTCTCTCTTGGCATTTCAGTGTTTCCCGGATTCGAGCCTCTCGAT
GTCTTCGGCCCCCTGGAAGTATTCTACGCGTTATCCTATCATCGTAATGTATCCCTTGCGGTAATCGCAAAAGAA
AAGGGACTGGTGAGCTCCCGTCCACCTTTCAAGACAGGGTCGAAAAATGCAACGAACGGCTACGAAAATGCTCTG
GGGCCAAGAATAGAGGCTACGCATTCCTTTTCCGAAGCTCCAGTACTGGATGTCCTGCTTGTGCCGGGAGGTCGC
GGAACCAGTGCCCTTGAGCAGGCAAACGACACCTCAGTCGAGGACTTTATCAAAAGCACCTTTGGTCAGTTGGAC
TTCCTACTCAGCGTTTGCACTGGGGCTGTCAGCTTAGCCAAAGCCGGCGTGCTTTCCGGCCGTCGAGCGACGACA
AACAAGAGCGTTTGGAAAGCGGCTACAAATCATGGGAAAAACGTCACCTGGGTGCCTACAGCCCGCTGGGTTGAA
GACGGAAACATTTGGACGAGCTCTGGAGTCTCCGCTGGGATAGATATGACCTACGCCTTTCTCAGGCGTTTATAC
GGCGACGGCGACGAGATTTTGAAGAGCGTTATGAACGAGATAGAATACGCGCCTCACACGAAAGCGGACTGGGAC
CCGTTTTCAGTAGTTCATAAGGTCCCCGGCGCGAACACGATGGCAAGTTTAGCCGACTCAACCACACCGGTTGGG
TACGATGAAAACTCTTAA
Gene >Hirsu2|5936
ATGGCCAGATTGCAACGTGCTTTCTTCCTCTTCTGTATTCCGGGCTTACTCGCCGCTGTGGGGGCTAGAGAGACT
GAGGGACAATGGTGCAAAGCCGGGCATTCTCTCTCTCTTGGCATTGTACGTACGCTCCGACGTCGACTTCACCTC
AACAGATCAAAAAGACAAATCCAAAAGTCAAAAGAGCTAAAAATCAAACTAGTCAGTGTTTCCCGGATTCGAGCC
TCTCGATGTCTTCGGCCCCCTGGAAGTATTCTACGCGGTACGAAAGCAATTTTACCAATCTGAAGCCGCCAGGTC
CGCCGCAATGAGGCCAGCAGTCTACACATTTCCATCTAACGCGGTTACACGTGCAGTTATCCTATCATCGTAATG
TATCCCTTGCGGTAATCGCAAAAGAAAAGGGACTGGTGAGCTCCCGTCCACCTTTCAAGACAGGGTCGAAAAATG
CAACGAACGGCTACGAAAATGCTCTGGGGCCAAGAATAGAGGCTACGCATTCCTTTTCCGAAGCTCCAGTACTGG
ATGTCCTGCTTGTGCCGGGAGGTCGCGGAACCAGTGCCCTTGAGCAGGCAAACGACACCTCAGTCGAGGACTTTA
TCAAAAGCACCTTTGGTCAGTTGGACTTCCTACTCAGCGTTTGCACTGGGGCTGTCAGCTTAGCCAAAGCCGGCG
TGCTTTCCGGCCGTCGAGCGACGACAAACAAGAGCGTTTGGAAAGCGGCTACAAATCATGGGAAAAACGTCACCT
GGGTGCCTACAGCCCGCTGGGTTGAAGACGGAAACATTTGGACGAGCTCTGGAGTCTCCGCTGGTAAGTTTAGCA
ACCATAGTGATGTGAAAAGCCGTCGTGCATAACACAAATCTCTCTCGTAGAGAAACTTTTGAGCAGCTGCTCAGG
TCGCTGCGGGCTACCTAACTGATCTCTTTGCAGGGATAGATATGACCTACGCCTTTCTCAGGCGTTTATACGGCG
ACGGCGACGAGATTTTGAAGAGCGTTATGAACGAGATAGAATACGCGCCTCACACGAAAGCGGACTGGGACCCGT
TTTCAGTAGTTCATAAGGTATTTCACGAATTTGAACAAGATCTGCCATATACTCATCGTCGATAGGTCCCCGGCG
CGAACACGATGGCAAGTTTAGCCGACTCAACCACACCGGTTGGGTACGATGAAAACTCTTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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