Protein ID | Hirsu2|5935 |
Gene name | |
Location | Contig_3:82080..83229 |
Strand | + |
Gene length (bp) | 1149 |
Transcript length (bp) | 1095 |
Coding sequence length (bp) | 1095 |
Protein length (aa) | 365 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0945 | 0.1357 | 0.9233 | 0.0963 | 0.0658 | 0.0089 | 0.0851 | 0.1618 | 0.0716 | 0.0005 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999712 |
Orthofinder run ID | 4 |
Orthogroup | 332 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5935 MKTFVSAVMVAALAQATEMGPQGGYGGRPGGGSGVDINNPGPLPEGVKKIGHEVARVGGCILERAWRDAKHLQCG KCEGGKENNLVSCVCGNKDQVEKSIRRNFNICIKETDKFHSVVREIGADIGGLGLSAFCGAYEGSGRRGGRGGEY KGESGRAYKRDLQGAYDEHKPSYGKSSYGEHKPHYKPEHKEYEPEYKPSPAPGYKPKPHTGDYADEDEYKPGQKD QYKADYKKGEEDLKEYHGKPTPMPSYKPKPHTGDYADAGHVGHIGGGHGGEHGLGGHGGEHGLGGHGGEHGLGGH GGEHGLGGHGGEHGLGGHGGEHGLGGHGGEHGLGGHGGEHHNGGHYEHKGDYGREEKSGYKSAY* |
Coding | >Hirsu2|5935 ATGAAGACCTTCGTCTCCGCCGTCATGGTCGCTGCGCTTGCGCAAGCTACCGAGATGGGGCCGCAGGGCGGCTAC GGTGGACGCCCTGGCGGTGGCTCCGGAGTCGATATCAACAACCCTGGCCCTCTTCCGGAGGGCGTCAAGAAGATC GGCCACGAAGTCGCTCGCGTCGGTGGCTGCATCCTTGAGCGAGCCTGGCGCGACGCGAAGCACCTGCAGTGCGGC AAGTGCGAGGGTGGCAAGGAGAACAACCTGGTGAGCTGCGTCTGCGGCAACAAGGATCAGGTCGAGAAGAGCATC CGCCGCAACTTCAACATCTGTATCAAAGAGACCGACAAGTTCCACTCCGTCGTCCGGGAGATTGGCGCCGACATC GGTGGACTCGGCTTGAGCGCGTTCTGCGGAGCTTACGAGGGCAGCGGCCGTCGCGGTGGGCGCGGCGGGGAGTAC AAGGGCGAGTCCGGCCGCGCTTACAAGAGGGATCTCCAGGGCGCATACGACGAGCACAAGCCTTCGTACGGCAAG TCCTCTTATGGCGAGCACAAGCCCCACTACAAGCCGGAGCACAAGGAGTATGAGCCCGAGTACAAGCCGTCGCCT GCTCCCGGCTACAAGCCCAAGCCTCACACCGGTGACTACGCCGACGAGGACGAGTACAAGCCCGGCCAAAAGGAT CAGTACAAGGCCGACTACAAGAAGGGCGAAGAGGACCTCAAGGAGTACCACGGCAAGCCCACGCCGATGCCCTCT TACAAGCCCAAGCCTCACACCGGTGACTACGCTGATGCCGGTCATGTCGGACACATCGGCGGTGGCCACGGTGGC GAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACAC GGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACACGGCGGCGAGCACGGCCTCGGC GGACACGGCGGCGAGCACGGCCTCGGAGGACACGGCGGCGAGCACCACAACGGCGGCCACTACGAGCACAAGGGC GACTACGGTCGCGAGGAGAAGTCTGGCTACAAGTCCGCCTACTAA |
Transcript | >Hirsu2|5935 ATGAAGACCTTCGTCTCCGCCGTCATGGTCGCTGCGCTTGCGCAAGCTACCGAGATGGGGCCGCAGGGCGGCTAC GGTGGACGCCCTGGCGGTGGCTCCGGAGTCGATATCAACAACCCTGGCCCTCTTCCGGAGGGCGTCAAGAAGATC GGCCACGAAGTCGCTCGCGTCGGTGGCTGCATCCTTGAGCGAGCCTGGCGCGACGCGAAGCACCTGCAGTGCGGC AAGTGCGAGGGTGGCAAGGAGAACAACCTGGTGAGCTGCGTCTGCGGCAACAAGGATCAGGTCGAGAAGAGCATC CGCCGCAACTTCAACATCTGTATCAAAGAGACCGACAAGTTCCACTCCGTCGTCCGGGAGATTGGCGCCGACATC GGTGGACTCGGCTTGAGCGCGTTCTGCGGAGCTTACGAGGGCAGCGGCCGTCGCGGTGGGCGCGGCGGGGAGTAC AAGGGCGAGTCCGGCCGCGCTTACAAGAGGGATCTCCAGGGCGCATACGACGAGCACAAGCCTTCGTACGGCAAG TCCTCTTATGGCGAGCACAAGCCCCACTACAAGCCGGAGCACAAGGAGTATGAGCCCGAGTACAAGCCGTCGCCT GCTCCCGGCTACAAGCCCAAGCCTCACACCGGTGACTACGCCGACGAGGACGAGTACAAGCCCGGCCAAAAGGAT CAGTACAAGGCCGACTACAAGAAGGGCGAAGAGGACCTCAAGGAGTACCACGGCAAGCCCACGCCGATGCCCTCT TACAAGCCCAAGCCTCACACCGGTGACTACGCTGATGCCGGTCATGTCGGACACATCGGCGGTGGCCACGGTGGC GAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACAC GGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACACGGCGGCGAGCACGGCCTCGGC GGACACGGCGGCGAGCACGGCCTCGGAGGACACGGCGGCGAGCACCACAACGGCGGCCACTACGAGCACAAGGGC GACTACGGTCGCGAGGAGAAGTCTGGCTACAAGTCCGCCTACTAA |
Gene | >Hirsu2|5935 ATGAAGACCTTCGTCTCCGCCGTCATGGTCGCTGCGCTTGCGCAAGCTACCGAGATGGGGCCGCAGGGCGGCTAC GGTGGACGCCCTGGCGGTGGCTCCGGAGTCGATATCAACAACCCTGGCCCTCTTCCGGAGGGCGTCAAGAAGATC GGCCACGAAGTCGCTCGCGTCGGTGGCTGCATCCTTGAGCGAGCCTGGCGCGACGCGAAGCACCTGCAGTGCGGC AAGTGCGAGGGTGGCAAGGAGAACAACCTGGTGAGCTGCGTCTGCGGCAACAAGGATCAGGTCGAGAAGAGCATC CGCCGCAACTTCAACATCTGTATCAAAGAGACCGACAAGTTCCACTCCGTCGTCCGGGAGATTGGCGCCGGTGAG TGCGGAGAAGGCCTGGCATCTGGTAGAGATGGCTGACGATGAGGTGTAGACATCGGTGGACTCGGCTTGAGCGCG TTCTGCGGAGCTTACGAGGGCAGCGGCCGTCGCGGTGGGCGCGGCGGGGAGTACAAGGGCGAGTCCGGCCGCGCT TACAAGAGGGATCTCCAGGGCGCATACGACGAGCACAAGCCTTCGTACGGCAAGTCCTCTTATGGCGAGCACAAG CCCCACTACAAGCCGGAGCACAAGGAGTATGAGCCCGAGTACAAGCCGTCGCCTGCTCCCGGCTACAAGCCCAAG CCTCACACCGGTGACTACGCCGACGAGGACGAGTACAAGCCCGGCCAAAAGGATCAGTACAAGGCCGACTACAAG AAGGGCGAAGAGGACCTCAAGGAGTACCACGGCAAGCCCACGCCGATGCCCTCTTACAAGCCCAAGCCTCACACC GGTGACTACGCTGATGCCGGTCATGTCGGACACATCGGCGGTGGCCACGGTGGCGAGCACGGCCTCGGCGGACAC GGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGCGGACACGGTGGCGAGCACGGCCTCGGC GGACACGGTGGCGAGCACGGCCTCGGCGGACACGGCGGCGAGCACGGCCTCGGCGGACACGGCGGCGAGCACGGC CTCGGAGGACACGGCGGCGAGCACCACAACGGCGGCCACTACGAGCACAAGGGCGACTACGGTCGCGAGGAGAAG TCTGGCTACAAGTCCGCCTACTAA |