Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|593
Gene name
Location	Contig_1117:1975..2755
Strand	-
Gene length (bp)	780
Transcript length (bp)	639
Coding sequence length (bp)	639
Protein length (aa)	213

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09056	Phospholip_A2_3	Prokaryotic phospholipase A2	7.6E-26	29	150

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D4B0M5\|A2001_ARTBC	Uncharacterized secreted protein ARB_02001 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02001 PE=1 SV=1	27	151	1.0E-12

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|593 MKLRLVALASLLAGAATARLNATKIEVVDMLCYEWSLQDFITLRDGRNYRRRLRRDYPDLNWESDGCTVVPDEPG GFKFGPACERHDFCYRNLKGQRRFYSGVRRSVDRGFDTDLGFTCSTPEAQELSDQACILKCSVYRTVYFAGVKAL GGIFGARVDAALPNGTVDGARPLPRRSDVMWDFRRNGSIKEIKDPGRLASRPGPWNEYPERP*
Coding	>Hirsu2\|593 ATGAAGCTCCGGCTCGTCGCCCTGGCCTCGCTGCTCGCCGGCGCGGCGACGGCGCGGCTGAACGCGACCAAGATC GAGGTCGTCGACATGCTGTGCTACGAGTGGTCGCTGCAGGACTTCATCACCCTCCGCGACGGCCGCAACTACCGC CGCCGGCTCAGGAGGGACTACCCGGACCTCAACTGGGAGTCGGACGGCTGCACCGTCGTGCCCGACGAGCCGGGC GGCTTCAAGTTCGGGCCGGCCTGCGAGCGGCACGACTTCTGCTACCGCAACCTCAAGGGCCAGCGGAGGTTCTAC AGCGGCGTCCGCAGGAGCGTCGACCGTGGCTTTGACACAGACCTCGGCTTCACCTGCTCGACGCCGGAGGCGCAG GAGCTGTCGGACCAGGCCTGCATCTTGAAGTGCTCCGTCTACCGGACCGTGTACTTCGCTGGCGTCAAGGCGCTC GGCGGCATCTTCGGAGCTAGGGTGGACGCGGCGCTTCCGAACGGGACGGTCGATGGCGCGAGGCCGCTCCCCCGG CGTTCGGACGTCATGTGGGACTTTAGGCGCAACGGGAGCATCAAGGAGATTAAGGACCCCGGGAGGCTGGCGTCC CGTCCGGGCCCGTGGAACGAGTATCCCGAGAGGCCGTAG
Transcript	>Hirsu2\|593 ATGAAGCTCCGGCTCGTCGCCCTGGCCTCGCTGCTCGCCGGCGCGGCGACGGCGCGGCTGAACGCGACCAAGATC GAGGTCGTCGACATGCTGTGCTACGAGTGGTCGCTGCAGGACTTCATCACCCTCCGCGACGGCCGCAACTACCGC CGCCGGCTCAGGAGGGACTACCCGGACCTCAACTGGGAGTCGGACGGCTGCACCGTCGTGCCCGACGAGCCGGGC GGCTTCAAGTTCGGGCCGGCCTGCGAGCGGCACGACTTCTGCTACCGCAACCTCAAGGGCCAGCGGAGGTTCTAC AGCGGCGTCCGCAGGAGCGTCGACCGTGGCTTTGACACAGACCTCGGCTTCACCTGCTCGACGCCGGAGGCGCAG GAGCTGTCGGACCAGGCCTGCATCTTGAAGTGCTCCGTCTACCGGACCGTGTACTTCGCTGGCGTCAAGGCGCTC GGCGGCATCTTCGGAGCTAGGGTGGACGCGGCGCTTCCGAACGGGACGGTCGATGGCGCGAGGCCGCTCCCCCGG CGTTCGGACGTCATGTGGGACTTTAGGCGCAACGGGAGCATCAAGGAGATTAAGGACCCCGGGAGGCTGGCGTCC CGTCCGGGCCCGTGGAACGAGTATCCCGAGAGGCCGTAG
Gene	>Hirsu2\|593 ATGAAGCTCCGGCTCGTCGCCCTGGCCTCGCTGCTCGCCGGCGCGGCGACGGCGCGGCTGAACGCGACCAAGATC GAGGTCGTCGACATGCTGTGCTACGAGTGGTCGCTGCAGGACTTCATCACCCTCCGCGACGGCCGCAACTACCGC CGCCGGCTCAGGAGGGACTACCCGGACCTCAACTGGGAGTCGGACGGCTGCACCGTCGTGCCCGACGAGCCGGGC GGCTTCAAGTTCGGGCCGGCCTGCGAGCGGCACGACTTCTGCTACCGCAACCTCAAGGGCCAGCGGAGGTTCTAC AGCGGCGTCCGCAGGAGCGTCGACCGTGGCTTTGACACAGAGTTCGTTGCGCGTCCATCTCCCCCCTTTTTCTCC CCGCTCCCGAATCACATGGCATGGCTTGGTCTGGGAAGACGAGGCATACGTCTTGGGAAGATTGTCGTCTGAGGG AGCACGCTGACGTCTGTGCCTCGCCCGTATAGCCTCGGCTTCACCTGCTCGACGCCGGAGGCGCAGGAGCTGTCG GACCAGGCCTGCATCTTGAAGTGCTCCGTCTACCGGACCGTGTACTTCGCTGGCGTCAAGGCGCTCGGCGGCATC TTCGGAGCTAGGGTGGACGCGGCGCTTCCGAACGGGACGGTCGATGGCGCGAGGCCGCTCCCCCGGCGTTCGGAC GTCATGTGGGACTTTAGGCGCAACGGGAGCATCAAGGAGATTAAGGACCCCGGGAGGCTGGCGTCCCGTCCGGGC CCGTGGAACGAGTATCCCGAGAGGCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail