© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5925 |
| Gene name | |
| Location | Contig_3:49319..50723 |
| Strand | - |
| Gene length (bp) | 1404 |
| Transcript length (bp) | 1404 |
| Coding sequence length (bp) | 1404 |
| Protein length (aa) | 468 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF12146 | Hydrolase_4 | Serine aminopeptidase, S33 | 2.9E-07 | 181 | 421 |
| PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 2.3E-06 | 155 | 320 |
| PF03583 | LIP | Secretory lipase | 1.0E-06 | 181 | 438 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004806 | triglyceride lipase activity | Yes |
| GO:0016042 | lipid catabolic process | Yes |
| GO:1901575 | organic substance catabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0052689 | carboxylic ester hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016298 | lipase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0008152 | metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0009056 | catabolic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1336 | 0.0801 | 0.9051 | 0.0757 | 0.1043 | 0.0494 | 0.2159 | 0.241 | 0.1142 | 0.0043 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 18 | 0.998639 |
| Orthofinder run ID | 4 |
| Orthogroup | 6191 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5925 MRRVLAFSAVAAAGFASAQQAANFNVSAEDARAHMCGDACQANIKRQNQLDLMAVGANFDYGFYATALNFTSSKP GDVLKLEPLDPTQYSFKAGTSVWRLQYTSVDLDGQPVPVTGFIAFPYTTPPGDDDVAYDDGSEEQGTEPKPNRKF RLAAFAHGTIGVFPGCAPSNGPSLYDYDSWQPLVARGYAVVATDYAGLGNNYTMHKYCSFPAHAADVYYSVLAAR SLFGAVLTPEWISIGHSQGGGTAWKLAESDFVRTDTAYLGTVALAPATYIIDMLLKRMDGVDHPNYLPYLTVGVE AANPQYHETLLSETLRRRIAMAKEAQLCTMAFMGLTADLRGNAKAIVSMEGVKRDMSTLLAWQNSTAPAMGGRSE APMLVVQGLNDTTVLPRTTIQAVESSCASGSEIHLSLYPGLEHSPLLQASEAEWMGWIDDLFAAGRLDSIGECSS NTKRVFNEDHVKLPGEE* |
| Coding | >Hirsu2|5925 ATGCGTCGAGTGCTTGCATTCAGCGCCGTTGCCGCCGCCGGCTTCGCTTCGGCACAACAGGCCGCCAACTTCAAC GTGTCGGCGGAGGATGCGCGTGCTCATATGTGCGGCGATGCATGCCAGGCAAACATCAAGCGGCAAAACCAGTTG GATCTGATGGCTGTTGGAGCCAATTTCGACTACGGATTCTACGCAACGGCACTCAACTTCACGAGCAGCAAGCCC GGAGACGTGCTCAAGCTGGAGCCGCTCGATCCAACACAGTACAGCTTCAAGGCCGGCACAAGTGTCTGGCGCCTA CAATATACGTCGGTCGATCTCGACGGACAGCCAGTGCCGGTGACGGGCTTCATCGCCTTCCCCTACACCACGCCT CCCGGGGACGACGACGTGGCCTACGACGATGGCTCCGAAGAGCAGGGCACGGAGCCGAAGCCGAACAGGAAGTTC CGCCTCGCCGCCTTCGCACATGGAACCATCGGCGTCTTCCCCGGCTGCGCTCCGTCCAACGGCCCCAGCTTGTAT GACTACGACAGTTGGCAGCCGCTCGTAGCGCGCGGGTACGCCGTCGTCGCCACCGACTACGCAGGCCTCGGCAAC AATTACACGATGCACAAGTACTGCAGCTTCCCGGCCCACGCGGCCGACGTCTATTACTCGGTGCTCGCGGCCCGC AGCCTCTTCGGCGCCGTGCTGACGCCGGAGTGGATCAGCATCGGGCACTCGCAGGGCGGCGGCACGGCCTGGAAG CTGGCCGAGAGCGACTTCGTGCGCACTGACACGGCGTATCTGGGCACCGTGGCGCTGGCGCCGGCCACCTACATC ATCGACATGCTGCTCAAGCGCATGGACGGCGTCGACCACCCCAATTACCTCCCCTACCTGACCGTGGGCGTGGAA GCGGCCAACCCGCAGTACCACGAGACGCTGCTGTCCGAAACGCTCCGCCGGCGCATTGCGATGGCCAAGGAGGCC CAGCTGTGTACGATGGCCTTTATGGGGCTCACCGCCGACCTCAGGGGCAATGCCAAGGCAATTGTATCCATGGAG GGCGTCAAGCGTGACATGTCGACTCTGCTGGCCTGGCAGAATTCAACGGCGCCGGCTATGGGCGGCCGCTCGGAG GCCCCGATGCTTGTCGTCCAGGGGCTCAACGACACGACCGTCCTGCCCAGGACGACGATTCAAGCCGTCGAGAGC AGCTGCGCGAGTGGCAGCGAGATCCACCTCAGCCTTTACCCGGGCCTTGAGCACTCGCCGCTGCTGCAGGCCTCC GAGGCCGAGTGGATGGGCTGGATCGACGACCTCTTCGCCGCCGGGAGGCTGGACAGCATCGGAGAATGCTCGAGC AATACGAAGAGAGTCTTCAACGAGGACCATGTCAAGCTGCCGGGCGAGGAGTAA |
| Transcript | >Hirsu2|5925 ATGCGTCGAGTGCTTGCATTCAGCGCCGTTGCCGCCGCCGGCTTCGCTTCGGCACAACAGGCCGCCAACTTCAAC GTGTCGGCGGAGGATGCGCGTGCTCATATGTGCGGCGATGCATGCCAGGCAAACATCAAGCGGCAAAACCAGTTG GATCTGATGGCTGTTGGAGCCAATTTCGACTACGGATTCTACGCAACGGCACTCAACTTCACGAGCAGCAAGCCC GGAGACGTGCTCAAGCTGGAGCCGCTCGATCCAACACAGTACAGCTTCAAGGCCGGCACAAGTGTCTGGCGCCTA CAATATACGTCGGTCGATCTCGACGGACAGCCAGTGCCGGTGACGGGCTTCATCGCCTTCCCCTACACCACGCCT CCCGGGGACGACGACGTGGCCTACGACGATGGCTCCGAAGAGCAGGGCACGGAGCCGAAGCCGAACAGGAAGTTC CGCCTCGCCGCCTTCGCACATGGAACCATCGGCGTCTTCCCCGGCTGCGCTCCGTCCAACGGCCCCAGCTTGTAT GACTACGACAGTTGGCAGCCGCTCGTAGCGCGCGGGTACGCCGTCGTCGCCACCGACTACGCAGGCCTCGGCAAC AATTACACGATGCACAAGTACTGCAGCTTCCCGGCCCACGCGGCCGACGTCTATTACTCGGTGCTCGCGGCCCGC AGCCTCTTCGGCGCCGTGCTGACGCCGGAGTGGATCAGCATCGGGCACTCGCAGGGCGGCGGCACGGCCTGGAAG CTGGCCGAGAGCGACTTCGTGCGCACTGACACGGCGTATCTGGGCACCGTGGCGCTGGCGCCGGCCACCTACATC ATCGACATGCTGCTCAAGCGCATGGACGGCGTCGACCACCCCAATTACCTCCCCTACCTGACCGTGGGCGTGGAA GCGGCCAACCCGCAGTACCACGAGACGCTGCTGTCCGAAACGCTCCGCCGGCGCATTGCGATGGCCAAGGAGGCC CAGCTGTGTACGATGGCCTTTATGGGGCTCACCGCCGACCTCAGGGGCAATGCCAAGGCAATTGTATCCATGGAG GGCGTCAAGCGTGACATGTCGACTCTGCTGGCCTGGCAGAATTCAACGGCGCCGGCTATGGGCGGCCGCTCGGAG GCCCCGATGCTTGTCGTCCAGGGGCTCAACGACACGACCGTCCTGCCCAGGACGACGATTCAAGCCGTCGAGAGC AGCTGCGCGAGTGGCAGCGAGATCCACCTCAGCCTTTACCCGGGCCTTGAGCACTCGCCGCTGCTGCAGGCCTCC GAGGCCGAGTGGATGGGCTGGATCGACGACCTCTTCGCCGCCGGGAGGCTGGACAGCATCGGAGAATGCTCGAGC AATACGAAGAGAGTCTTCAACGAGGACCATGTCAAGCTGCCGGGCGAGGAGTAA |
| Gene | >Hirsu2|5925 ATGCGTCGAGTGCTTGCATTCAGCGCCGTTGCCGCCGCCGGCTTCGCTTCGGCACAACAGGCCGCCAACTTCAAC GTGTCGGCGGAGGATGCGCGTGCTCATATGTGCGGCGATGCATGCCAGGCAAACATCAAGCGGCAAAACCAGTTG GATCTGATGGCTGTTGGAGCCAATTTCGACTACGGATTCTACGCAACGGCACTCAACTTCACGAGCAGCAAGCCC GGAGACGTGCTCAAGCTGGAGCCGCTCGATCCAACACAGTACAGCTTCAAGGCCGGCACAAGTGTCTGGCGCCTA CAATATACGTCGGTCGATCTCGACGGACAGCCAGTGCCGGTGACGGGCTTCATCGCCTTCCCCTACACCACGCCT CCCGGGGACGACGACGTGGCCTACGACGATGGCTCCGAAGAGCAGGGCACGGAGCCGAAGCCGAACAGGAAGTTC CGCCTCGCCGCCTTCGCACATGGAACCATCGGCGTCTTCCCCGGCTGCGCTCCGTCCAACGGCCCCAGCTTGTAT GACTACGACAGTTGGCAGCCGCTCGTAGCGCGCGGGTACGCCGTCGTCGCCACCGACTACGCAGGCCTCGGCAAC AATTACACGATGCACAAGTACTGCAGCTTCCCGGCCCACGCGGCCGACGTCTATTACTCGGTGCTCGCGGCCCGC AGCCTCTTCGGCGCCGTGCTGACGCCGGAGTGGATCAGCATCGGGCACTCGCAGGGCGGCGGCACGGCCTGGAAG CTGGCCGAGAGCGACTTCGTGCGCACTGACACGGCGTATCTGGGCACCGTGGCGCTGGCGCCGGCCACCTACATC ATCGACATGCTGCTCAAGCGCATGGACGGCGTCGACCACCCCAATTACCTCCCCTACCTGACCGTGGGCGTGGAA GCGGCCAACCCGCAGTACCACGAGACGCTGCTGTCCGAAACGCTCCGCCGGCGCATTGCGATGGCCAAGGAGGCC CAGCTGTGTACGATGGCCTTTATGGGGCTCACCGCCGACCTCAGGGGCAATGCCAAGGCAATTGTATCCATGGAG GGCGTCAAGCGTGACATGTCGACTCTGCTGGCCTGGCAGAATTCAACGGCGCCGGCTATGGGCGGCCGCTCGGAG GCCCCGATGCTTGTCGTCCAGGGGCTCAACGACACGACCGTCCTGCCCAGGACGACGATTCAAGCCGTCGAGAGC AGCTGCGCGAGTGGCAGCGAGATCCACCTCAGCCTTTACCCGGGCCTTGAGCACTCGCCGCTGCTGCAGGCCTCC GAGGCCGAGTGGATGGGCTGGATCGACGACCTCTTCGCCGCCGGGAGGCTGGACAGCATCGGAGAATGCTCGAGC AATACGAAGAGAGTCTTCAACGAGGACCATGTCAAGCTGCCGGGCGAGGAGTAA |