Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|592
Gene name
LocationContig_1117:13..1175
Strand+
Gene length (bp)1162
Transcript length (bp)1074
Coding sequence length (bp)1074
Protein length (aa) 358

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 15 37 22
2 56 75 19
3 95 117 22
4 137 159 22
5 179 201 22
6 213 235 22
7 255 276 21

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|592
LAPPPGVTPNPAHPASLVGLAGIAAGIGLGFVTTFFLLRTYGRVVIKRTFTLEDVLVSIGWAGTVAYCGIMRATM
SHHGGEHGWDITRDQAHEAAYWFNVASIEYGVMIGFTKLAVLCLYRRVFSPARWSRFDNACIGLIVLVSCFYGST
TVVKIWECAPRDKIWNSSLPGRCLEINWILNISGGFNMMTDFLILLLPVHAVLNLKVDRLKRILIVLTFTFGLCA
PVFATAGFIVRLRNSGNPDKTWNQPEILLWGAGELVSGNLCVCFPELFFLFRRKRRAQLRRERERRHHPTPSQLQ
GWHDENQKAGAQPSYPYFTKSLMGTAVLSTASSTQPYIELQDQASVKNAPSAQSGRS*
Coding >Hirsu2|592
CTGGCGCCGCCGCCCGGGGTGACGCCCAACCCGGCGCACCCGGCGTCGCTGGTGGGGCTGGCCGGGATCGCGGCC
GGGATCGGGCTCGGCTTCGTGACGACCTTCTTCCTGCTGCGGACGTACGGGCGCGTCGTGATCAAGCGCACCTTC
ACGCTCGAGGACGTGCTGGTCAGCATCGGCTGGGCCGGCACGGTGGCCTACTGCGGCATCATGCGCGCCACCATG
TCGCACCACGGCGGCGAGCACGGCTGGGACATCACGCGCGACCAGGCGCACGAGGCGGCCTACTGGTTCAACGTG
GCCAGCATCGAGTACGGCGTCATGATCGGCTTCACCAAGCTGGCCGTCCTGTGCCTCTACCGCCGCGTCTTCTCG
CCCGCCCGCTGGTCGCGCTTCGACAACGCCTGCATCGGCCTCATCGTCCTCGTCAGCTGCTTCTACGGCAGCACC
ACCGTCGTCAAGATCTGGGAGTGCGCCCCGCGCGACAAGATCTGGAACTCGTCCCTGCCGGGCCGCTGCCTCGAG
ATCAACTGGATCCTCAACATCAGCGGCGGCTTCAACATGATGACCGACTTCCTCATCCTGCTGCTGCCCGTCCAC
GCCGTCCTCAACCTCAAGGTCGACCGCCTCAAGCGCATCCTCATCGTCCTCACCTTCACCTTTGGCCTCTGCGCC
CCCGTCTTCGCCACCGCCGGCTTCATCGTCCGGCTCCGCAACAGCGGCAACCCCGACAAGACCTGGAACCAGCCC
GAGATCCTGCTCTGGGGCGCCGGCGAGCTCGTCTCCGGCAACCTCTGCGTCTGCTTCCCCGAGCTCTTCTTCCTC
TTCCGCCGCAAGCGCCGCGCCCAGCTGCGCCGCGAGCGCGAGCGCCGCCACCACCCGACCCCCTCCCAGCTGCAG
GGCTGGCACGACGAGAACCAAAAGGCCGGCGCCCAGCCGTCCTACCCCTACTTCACCAAGAGCCTCATGGGCACC
GCCGTCCTCAGCACCGCCAGCAGCACCCAGCCGTACATCGAGCTGCAGGACCAGGCCAGCGTCAAGAACGCGCCC
AGCGCCCAGAGCGGACGGTCCTGA
Transcript >Hirsu2|592
CTGGCGCCGCCGCCCGGGGTGACGCCCAACCCGGCGCACCCGGCGTCGCTGGTGGGGCTGGCCGGGATCGCGGCC
GGGATCGGGCTCGGCTTCGTGACGACCTTCTTCCTGCTGCGGACGTACGGGCGCGTCGTGATCAAGCGCACCTTC
ACGCTCGAGGACGTGCTGGTCAGCATCGGCTGGGCCGGCACGGTGGCCTACTGCGGCATCATGCGCGCCACCATG
TCGCACCACGGCGGCGAGCACGGCTGGGACATCACGCGCGACCAGGCGCACGAGGCGGCCTACTGGTTCAACGTG
GCCAGCATCGAGTACGGCGTCATGATCGGCTTCACCAAGCTGGCCGTCCTGTGCCTCTACCGCCGCGTCTTCTCG
CCCGCCCGCTGGTCGCGCTTCGACAACGCCTGCATCGGCCTCATCGTCCTCGTCAGCTGCTTCTACGGCAGCACC
ACCGTCGTCAAGATCTGGGAGTGCGCCCCGCGCGACAAGATCTGGAACTCGTCCCTGCCGGGCCGCTGCCTCGAG
ATCAACTGGATCCTCAACATCAGCGGCGGCTTCAACATGATGACCGACTTCCTCATCCTGCTGCTGCCCGTCCAC
GCCGTCCTCAACCTCAAGGTCGACCGCCTCAAGCGCATCCTCATCGTCCTCACCTTCACCTTTGGCCTCTGCGCC
CCCGTCTTCGCCACCGCCGGCTTCATCGTCCGGCTCCGCAACAGCGGCAACCCCGACAAGACCTGGAACCAGCCC
GAGATCCTGCTCTGGGGCGCCGGCGAGCTCGTCTCCGGCAACCTCTGCGTCTGCTTCCCCGAGCTCTTCTTCCTC
TTCCGCCGCAAGCGCCGCGCCCAGCTGCGCCGCGAGCGCGAGCGCCGCCACCACCCGACCCCCTCCCAGCTGCAG
GGCTGGCACGACGAGAACCAAAAGGCCGGCGCCCAGCCGTCCTACCCCTACTTCACCAAGAGCCTCATGGGCACC
GCCGTCCTCAGCACCGCCAGCAGCACCCAGCCGTACATCGAGCTGCAGGACCAGGCCAGCGTCAAGAACGCGCCC
AGCGCCCAGAGCGGACGGTCCTGA
Gene >Hirsu2|592
CTGGCGCCGCCGCCCGGGGTGACGCCCAACCCGGCGCACCCGGCGTCGCTGGTGGGGCTGGCCGGGATCGCGGCC
GGGATCGGGCTCGGCTTCGTGACGACCTTCTTCCTGCTGCGGACGTACGGGCGCGTCGTGATCAAGCGCACCTTC
ACGCTCGAGGACGTGCTGGTCAGCATCGGCTGGGCCGGCACGGTGGCCTACTGCGGCATCATGCGCGCCACCATG
TCGCACCACGGCGGCGAGCACGGCTGGGACATCACGCGCGACCAGGCGCACGAGGCGGCCTACTGGTTCAACGTG
GCCAGCATCGAGTACGGCGTCATGATCGGCTTCACCAAGCTGGCCGTCCTGTGCCTCTACCGCCGCGTCTTCTCG
CCCGCCCGCTGGTCGCGCTTCGACAACGCCTGCATCGGCCTCATCGTCCTCGTCAGCTGCTTCTACGGCAGCACC
ACCGTCGTCAAGATCTGGGAGTGCGCCCCGCGCGACAAGATCTGGAACTCGTCCCTGCCGGGCCGCTGCCTCGAG
ATCAACTGGATCCTCAACATCAGCGGCGGCTTCAACATGATGACCGACTTCCTCATCCTGCTGCTGCCCGTCCAC
GCCGTCCTCAACCTCAAGGTCGACCGCCTCAAGCGCATCCTCATCGTCCTCACCTTCACCTTTGGCCTCTGGTAC
GTCCGTCCCGTCTCCCCCCCCTTCAAGTCGTGCCATGCATCGTTCGTTCGGCCTGAGCCGCGTGCCGACCTCGTC
CACCCGCAGCGCCCCCGTCTTCGCCACCGCCGGCTTCATCGTCCGGCTCCGCAACAGCGGCAACCCCGACAAGAC
CTGGAACCAGCCCGAGATCCTGCTCTGGGGCGCCGGCGAGCTCGTCTCCGGCAACCTCTGCGTCTGCTTCCCCGA
GCTCTTCTTCCTCTTCCGCCGCAAGCGCCGCGCCCAGCTGCGCCGCGAGCGCGAGCGCCGCCACCACCCGACCCC
CTCCCAGCTGCAGGGCTGGCACGACGAGAACCAAAAGGCCGGCGCCCAGCCGTCCTACCCCTACTTCACCAAGAG
CCTCATGGGCACCGCCGTCCTCAGCACCGCCAGCAGCACCCAGCCGTACATCGAGCTGCAGGACCAGGCCAGCGT
CAAGAACGCGCCCAGCGCCCAGAGCGGACGGTCCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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