Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5909
Gene name
LocationContig_2999:487..1337
Strand-
Gene length (bp)850
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5909
MVQTNHVVAIIIIVLFAILALVSFGIWKLVHTARKDLSVTSASSGSSDSSQDILATLSYRPLVSAKPLTGFSLST
LPGSSPIKTPLPASRDRQLGGFSLVVTSYRLLVARVRRLLSHQHVLPASPSATLLLGAHTTQRRHAETFCPDGAE
EATSAGTYNAAREDRTLRVGYSGGGQCAPERSELTPTMMNDIV*
Coding >Hirsu2|5909
ATGGTGCAGACTAACCACGTGGTGGCCATCATCATCATCGTCCTCTTCGCCATCCTCGCCCTCGTCTCCTTCGGC
ATCTGGAAGCTCGTCCACACGGCGCGCAAGGACCTGAGCGTCACCTCCGCCTCGAGCGGCAGCAGCGATTCCAGC
CAGGACATTCTCGCAACACTTTCTTACCGGCCTCTCGTGTCAGCAAAACCTCTTACCGGCTTCTCGTTATCAACA
CTTCCCGGCTCTTCTCCCATCAAAACCCCTTTACCGGCTTCTCGTGACCGACAACTTGGCGGCTTCTCTCTCGTC
GTCACTTCTTACCGGCTTCTCGTCGCCCGTGTTCGGCGGCTTCTCTCTCATCAACACGTCTTACCGGCTTCTCCG
TCAGCGACCCTTCTTCTCGGCGCACACACCACACAGCGCCGACACGCCGAGACGTTTTGTCCAGACGGCGCGGAG
GAAGCTACCTCGGCCGGGACATATAATGCTGCGAGAGAAGACAGGACTTTGCGAGTGGGCTACTCTGGGGGGGGA
CAGTGCGCGCCGGAGCGCAGTGAGTTGACGCCCACCATGATGAACGACATAGTATAG
Transcript >Hirsu2|5909
ATGGTGCAGACTAACCACGTGGTGGCCATCATCATCATCGTCCTCTTCGCCATCCTCGCCCTCGTCTCCTTCGGC
ATCTGGAAGCTCGTCCACACGGCGCGCAAGGACCTGAGCGTCACCTCCGCCTCGAGCGGCAGCAGCGATTCCAGC
CAGGACATTCTCGCAACACTTTCTTACCGGCCTCTCGTGTCAGCAAAACCTCTTACCGGCTTCTCGTTATCAACA
CTTCCCGGCTCTTCTCCCATCAAAACCCCTTTACCGGCTTCTCGTGACCGACAACTTGGCGGCTTCTCTCTCGTC
GTCACTTCTTACCGGCTTCTCGTCGCCCGTGTTCGGCGGCTTCTCTCTCATCAACACGTCTTACCGGCTTCTCCG
TCAGCGACCCTTCTTCTCGGCGCACACACCACACAGCGCCGACACGCCGAGACGTTTTGTCCAGACGGCGCGGAG
GAAGCTACCTCGGCCGGGACATATAATGCTGCGAGAGAAGACAGGACTTTGCGAGTGGGCTACTCTGGGGGGGGA
CAGTGCGCGCCGGAGCGCAGTGAGTTGACGCCCACCATGATGAACGACATAGTATAG
Gene >Hirsu2|5909
ATGGTGCAGACTAACCACGTGGTGGCCATCATCATCATCGTCCTCTTCGCCATCCTCGCCCTCGTCTCCTTCGGC
ATCTGGAAGCTCGTCCACACGGCGCGCAAGGACCTGAGCGTCACCTCCGCCTCGAGCGGCAGCAGCGATTCCAGC
CAGGACATTGTCGACGACTGACAATCACCTGCCCCGGGGGGGTTCAAGCATCCGAAATAGCAGAAAAAAGCGGGG
ACGTCGGCCCGCCCGGCGCCGAGGCCGTCGGGCGGGGCCCCCGCGCGCTTGGACGAAGACTGCAACGGCATGATG
CGCTCACGATCTATTCTCACGACTTTGCACGACCATGGCTCCTCTTGCGGGATATACATAATGTCTTTTTTTTTT
TAAGGGGATGGATCATGCGCCGTTTTATCGATCCTCCTATGTTCATACACAGCTCGCAACACTTTCTTACCGGCC
TCTCGTGTCAGCAAAACCTCTTACCGGCTTCTCGTTATCAACACTTCCCGGCTCTTCTCCCATCAAAACCCCTTT
ACCGGCTTCTCGTGACCGACAACTTGGCGGCTTCTCTCTCGTCGTCACTTCTTACCGGCTTCTCGTCGCCCGTGT
TCGGCGGCTTCTCTCTCATCAACACGTCTTACCGGCTTCTCCGTCAGCGACCCTTCTTCTCGGCGCACACACCAC
ACAGCGCCGACACGCCGAGACGTTTTGTCCAGACGGCGCGGAGGAAGCTACCTCGGCCGGGACATATAATGCTGC
GAGAGAAGACAGGACTTTGCGAGTGGGCTACTCTGGGGGGGGACAGTGCGCGCCGGAGCGCAGTGAGTTGACGCC
CACCATGATGAACGACATAGTATAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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