Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5906
Gene name
LocationContig_2994:571..1233
Strand+
Gene length (bp)662
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01699 Na_Ca_ex Sodium/calcium exchanger protein 1.3E-14 2 102

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 5 110 3.0E-20
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 2 109 1.0E-18
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 2 110 2.0E-18
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 5 109 2.0E-18
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 5 115 3.0E-18
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Swissprot ID Swissprot Description Start End E-value
sp|Q75XW3|CAX_APHHA Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 5 110 3.0E-20
sp|Q5KQN0|CAX2_ORYSJ Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 2 109 1.0E-18
sp|P74072|CAX_SYNY3 Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 2 110 2.0E-18
sp|Q39254|CAX2_ARATH Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 5 109 2.0E-18
sp|Q9LFZ8|CAX6_ARATH Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 5 115 3.0E-18
sp|Q8L783|CAX5_ARATH Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 5 115 5.0E-18
sp|O59768|VCX1_SCHPO Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 2 123 3.0E-17
sp|Q6K1C4|CAX3_ORYSJ Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 2 107 9.0E-17
sp|Q99385|VCX1_YEAST Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 2 115 7.0E-16
sp|Q6YXZ1|CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1 2 113 9.0E-14
sp|O34840|CHAA_BACSU Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 7 110 1.0E-13
sp|Q5TKG3|CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b OS=Oryza sativa subsp. japonica GN=CAX1b PE=2 SV=1 2 116 3.0E-13
sp|Q945S5|CAX4_ARATH Vacuolar cation/proton exchanger 4 OS=Arabidopsis thaliana GN=CAX4 PE=1 SV=2 2 102 6.0E-11
sp|Q39253|CAX1_ARATH Vacuolar cation/proton exchanger 1 OS=Arabidopsis thaliana GN=CAX1 PE=1 SV=3 2 115 2.0E-10
sp|Q93Z81|CAX3_ARATH Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 2 110 1.0E-08
sp|Q769E5|CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 1 116 6.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0009987 cellular process No
GO:0110165 cellular anatomical entity No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.2998 0.0932 0.0653 0.5658 0.144 0.0085 0.3376 0.8953 0.1732 0.0198

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 45 67 22
3 82 100 18

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup3249
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7016
Ophiocordyceps australis map64 (Brazil) OphauB2|6081
Ophiocordyceps camponoti-floridani Ophcf2|02350
Ophiocordyceps camponoti-rufipedis Ophun1|111
Ophiocordyceps kimflemingae Ophio5|4573
Ophiocordyceps subramaniannii Hirsu2|5906 (this protein)
Ophiocordyceps subramaniannii Hirsu2|6017

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5906
LQDQIRIVQASLLGSILANLLLILGMGFFLGGLRYREQIYNSTVTQMSACLLSLSVISLVLPTAFHASFNDPRRA
DSESLKISRGTSVILLLVYVIYLLFQLKSHAYMYESTPQHIVDAESIPGPAAAWLDTSSSDDSS*
Coding >Hirsu2|5906
CTGCAGGATCAGATTCGCATCGTCCAGGCATCCCTGCTTGGTTCCATCTTGGCCAACCTGCTGCTCATCCTGGGC
ATGGGCTTCTTTCTTGGCGGGCTCCGATATCGTGAGCAGATCTACAACAGCACCGTGACGCAGATGAGCGCCTGC
CTGCTCAGCCTGAGCGTCATCAGCCTCGTGCTGCCGACCGCCTTTCATGCTTCTTTCAACGACCCGCGCCGGGCC
GACTCCGAGTCGCTCAAGATCAGCCGCGGAACCAGCGTGATCCTCCTGCTCGTCTACGTCATCTACCTGCTCTTC
CAGCTCAAGTCTCACGCGTACATGTACGAGTCGACGCCGCAGCACATCGTCGACGCCGAGTCGATCCCCGGCCCG
GCCGCCGCCTGGCTGGACACGTCGAGCTCCGACGACAGCTCATGA
Transcript >Hirsu2|5906
CTGCAGGATCAGATTCGCATCGTCCAGGCATCCCTGCTTGGTTCCATCTTGGCCAACCTGCTGCTCATCCTGGGC
ATGGGCTTCTTTCTTGGCGGGCTCCGATATCGTGAGCAGATCTACAACAGCACCGTGACGCAGATGAGCGCCTGC
CTGCTCAGCCTGAGCGTCATCAGCCTCGTGCTGCCGACCGCCTTTCATGCTTCTTTCAACGACCCGCGCCGGGCC
GACTCCGAGTCGCTCAAGATCAGCCGCGGAACCAGCGTGATCCTCCTGCTCGTCTACGTCATCTACCTGCTCTTC
CAGCTCAAGTCTCACGCGTACATGTACGAGTCGACGCCGCAGCACATCGTCGACGCCGAGTCGATCCCCGGCCCG
GCCGCCGCCTGGCTGGACACGTCGAGCTCCGACGACAGCTCATGA
Gene >Hirsu2|5906
CTGCAGGATCAGATTCGCATCGTCCAGGCATCCCTGCTTGGTTCCATCTTGGCCAACCTGCTGCTCATCCTGGGC
ATGGGCTTCTTTCTTGGCGGGCTCCGATATCGTGAGCAGGTGCGCGCGCCCGCCCCCCCGCCGAAGCCGACTGGG
AATTCGCGTTGACCCCCGACGCTCCAGATCTACAACAGCACCGTGACGCAGATGAGCGCCTGCCTGCTCAGCCTG
AGCGTCATCAGCCTCGTGCTGCCGGTATGTCGCACCCCTGGAACGACCGCCACTGTGCGCCACGTCTTGGCTGAC
GCCACGCAGACCGCCTTTCATGCTTCTTTCAACGACCCGCGCCGGGCCGACTCCGAGTCGCTCAAGATCAGCCGC
GGAACCAGCGTGGTGAGCCGCCGCCTCAGACCAGCCGCGCTCCTGCAGCCGACGCTAACGGCGCTCTCTCCAGAT
CCTCCTGCTCGTCTACGTCATCTACCTGCTCTTCCAGCTCAAGTCTCACGCGTACATGTACGAGTCGACGCCGCA
GCACATCGTCGACGCCGAGTCGATCCCCGGCCCGGCCGCCGCCTGGCTGGACACGTCGAGCTCCGACGACAGCTC
GTCGTCGAGCTCCGACTCGGACTCGTCCGACCACTCGCGGGATACCGTCCGCCGCAAGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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