© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5905 |
| Gene name | |
| Location | Contig_2994:70..388 |
| Strand | + |
| Gene length (bp) | 318 |
| Transcript length (bp) | 243 |
| Coding sequence length (bp) | 243 |
| Protein length (aa) | 81 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 2 | 78 | 7.0E-15 |
| sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 2 | 78 | 8.0E-14 |
| sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 2 | 78 | 4.0E-11 |
| sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 1 | 78 | 3.0E-10 |
| sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 8 | 78 | 9.0E-09 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99385|VCX1_YEAST | Vacuolar calcium ion transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VCX1 PE=1 SV=1 | 2 | 78 | 7.0E-15 |
| sp|O59768|VCX1_SCHPO | Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vcx1 PE=3 SV=1 | 2 | 78 | 8.0E-14 |
| sp|Q5KQN0|CAX2_ORYSJ | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica GN=CAX2 PE=2 SV=2 | 2 | 78 | 4.0E-11 |
| sp|Q6K1C4|CAX3_ORYSJ | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2 | 1 | 78 | 3.0E-10 |
| sp|Q8L783|CAX5_ARATH | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana GN=CAX5 PE=2 SV=1 | 8 | 78 | 9.0E-09 |
| sp|Q39254|CAX2_ARATH | Vacuolar cation/proton exchanger 2 OS=Arabidopsis thaliana GN=CAX2 PE=1 SV=2 | 8 | 78 | 2.0E-08 |
| sp|Q9LFZ8|CAX6_ARATH | Putative vacuolar cation/proton exchanger 6 OS=Arabidopsis thaliana GN=CAX6 PE=3 SV=3 | 8 | 78 | 2.0E-08 |
| sp|P74072|CAX_SYNY3 | Ca(2+)/H(+) antiporter OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1336 PE=1 SV=1 | 10 | 78 | 2.0E-07 |
| sp|Q75XW3|CAX_APHHA | Ca(2+)/H(+) antiporter OS=Aphanothece halophytica PE=1 SV=1 | 11 | 78 | 2.0E-07 |
| sp|O34840|CHAA_BACSU | Ca(2+)/H(+) antiporter ChaA OS=Bacillus subtilis (strain 168) GN=chaA PE=1 SV=1 | 30 | 78 | 2.0E-07 |
| sp|Q93Z81|CAX3_ARATH | Vacuolar cation/proton exchanger 3 OS=Arabidopsis thaliana GN=CAX3 PE=1 SV=1 | 8 | 78 | 8.0E-06 |
| sp|Q769E5|CAX1A_ORYSJ | Vacuolar cation/proton exchanger 1a OS=Oryza sativa subsp. japonica GN=CAX1a PE=1 SV=1 | 8 | 78 | 1.0E-05 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 22 | 17 |
| 2 | 26 | 48 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5905 MVVTYSWLNVLLVFVPIGIIVANVRGVHGGIVFAMNCIAVIPLAGLLSHATESVASNMGDSLGALLNVTFGNAVE LIIFM* |
| Coding | >Hirsu2|5905 ATGGTGGTGACGTACAGCTGGCTCAACGTCCTGCTCGTCTTCGTCCCCATCGGCATCATCGTCGCCAACGTGCGC GGCGTCCACGGCGGCATCGTCTTCGCCATGAACTGCATCGCCGTCATCCCCCTCGCCGGCCTCCTCAGCCACGCC ACCGAGTCCGTCGCCAGCAACATGGGCGACTCCCTCGGCGCCCTGCTCAACGTCACCTTTGGCAACGCCGTCGAA CTAATCATCTTCATGTAA |
| Transcript | >Hirsu2|5905 ATGGTGGTGACGTACAGCTGGCTCAACGTCCTGCTCGTCTTCGTCCCCATCGGCATCATCGTCGCCAACGTGCGC GGCGTCCACGGCGGCATCGTCTTCGCCATGAACTGCATCGCCGTCATCCCCCTCGCCGGCCTCCTCAGCCACGCC ACCGAGTCCGTCGCCAGCAACATGGGCGACTCCCTCGGCGCCCTGCTCAACGTCACCTTTGGCAACGCCGTCGAA CTAATCATCTTCATGTAA |
| Gene | >Hirsu2|5905 ATGGTGGTGACGTACAGCTGGCTCAACGTCCTGCTCGTCTTCGTCCCCATCGGCATCATCGTCGCCAACGTGCGC GGCGTCCACGGCGGCATCGTCTTCGCCATGAACTGCATCGCCGTCATCCCCCTCGCCGGCCTCCTCAGCCACGCC ACCGAGTCCGTCGCCAGCAACATGGGCGACTCCCTCGGCGCCCTGCTCAACGTCACCTTTGGCAACGCCGTCGAA CTAATCATCTTGTGAGCAGACCCGTCACCTGTCCCCCCGTCCCCCTGCGAATTCCTGACTGACTCGGGGCCTCCC CCTTCCCACAGCATGTAA |