Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5885
Gene name
LocationContig_298:18596..19643
Strand+
Gene length (bp)1047
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.2219 0.0925 0.9141 0.2148 0.0925 0.0858 0.1587 0.3862 0.28 0.0248

SignalP

SignalP signal predicted Location Score
Yes 1 - 23 0.99963

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup203
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1057
Ophiocordyceps australis map64 (Brazil) OphauB2|6505
Ophiocordyceps australis map64 (Brazil) OphauB2|7186
Ophiocordyceps camponoti-floridani Ophcf2|05196
Ophiocordyceps camponoti-floridani Ophcf2|05197
Ophiocordyceps camponoti-rufipedis Ophun1|5097
Ophiocordyceps kimflemingae Ophio5|8170
Ophiocordyceps subramaniannii Hirsu2|1068
Ophiocordyceps subramaniannii Hirsu2|2263
Ophiocordyceps subramaniannii Hirsu2|5885 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5885
MTPRAIITLFVASVLHNAIPAVGVDLASVSSDNSEHRAITRLIYQAIRSEDLPHLDTPMPGQPCFYTRDQLEHQN
AGIDITTVRNQDYEVINAGTGSMDIAITTSTAKIDNSSASWTSEGRNAIGGEVTVGYGFAGFGASATASGSHSTM
NAESGGSSQQQEFREDRNFMAQCPARHICTVQTWTFLIRAHGKCPRIPLVDPVCFTERHPRTHYRLFPTLQMQGL
WPGNLTLASVHGHIDEWTVLGSGYYKVFNKADGKPATKVDPFKLVKGVVLPSKDKFRVEYKVNIDCEIAYPLLQA
DQRPYRTQVMLQRSLDAPIRRVHQRSTRVSAEPEVKIIILNSSLPKNF*
Coding >Hirsu2|5885
ATGACGCCACGGGCTATTATCACTCTCTTCGTCGCCAGCGTTCTCCATAACGCTATACCGGCAGTCGGTGTGGAC
TTGGCGAGCGTGTCTAGCGACAACAGCGAACACAGAGCAATCACGAGACTCATTTATCAAGCAATCAGGAGTGAG
GACCTTCCTCACCTTGACACTCCTATGCCCGGGCAACCGTGCTTCTATACCCGTGATCAACTAGAGCACCAAAAC
GCCGGGATTGATATTACTACTGTCCGCAATCAAGACTACGAAGTCATCAATGCTGGGACCGGCTCAATGGACATT
GCCATAACAACATCTACGGCAAAAATTGACAACTCTTCTGCTTCGTGGACAAGCGAGGGCCGAAATGCTATCGGA
GGCGAAGTGACAGTTGGCTACGGCTTTGCAGGTTTCGGTGCGTCTGCGACTGCTTCAGGAAGCCACTCTACCATG
AACGCAGAAAGTGGAGGGTCCAGCCAGCAACAAGAATTCCGGGAAGACAGAAATTTCATGGCACAGTGTCCAGCT
CGTCATATCTGCACAGTTCAGACCTGGACTTTTCTCATCAGGGCCCATGGAAAATGTCCGCGGATACCGCTGGTC
GACCCGGTTTGCTTTACTGAGCGTCATCCCAGGACGCACTACCGCCTGTTTCCGACGCTACAAATGCAAGGCTTG
TGGCCGGGTAATCTCACACTTGCCTCTGTCCACGGCCACATAGATGAATGGACTGTTCTGGGCTCCGGATACTAC
AAAGTATTCAACAAAGCGGATGGCAAACCTGCCACCAAGGTGGATCCGTTCAAGTTAGTCAAAGGTGTTGTCTTG
CCCTCCAAAGACAAATTCCGCGTCGAATACAAAGTCAACATCGATTGCGAAATTGCGTACCCCTTACTTCAGGCG
GACCAAAGGCCATACAGAACACAGGTTATGCTTCAGCGATCGCTCGACGCACCGATTAGGAGAGTGCATCAACGG
TCGACGAGGGTATCTGCGGAGCCGGAGGTGAAAATCATTATCCTTAACTCCTCCCTTCCAAAAAATTTCTAA
Transcript >Hirsu2|5885
ATGACGCCACGGGCTATTATCACTCTCTTCGTCGCCAGCGTTCTCCATAACGCTATACCGGCAGTCGGTGTGGAC
TTGGCGAGCGTGTCTAGCGACAACAGCGAACACAGAGCAATCACGAGACTCATTTATCAAGCAATCAGGAGTGAG
GACCTTCCTCACCTTGACACTCCTATGCCCGGGCAACCGTGCTTCTATACCCGTGATCAACTAGAGCACCAAAAC
GCCGGGATTGATATTACTACTGTCCGCAATCAAGACTACGAAGTCATCAATGCTGGGACCGGCTCAATGGACATT
GCCATAACAACATCTACGGCAAAAATTGACAACTCTTCTGCTTCGTGGACAAGCGAGGGCCGAAATGCTATCGGA
GGCGAAGTGACAGTTGGCTACGGCTTTGCAGGTTTCGGTGCGTCTGCGACTGCTTCAGGAAGCCACTCTACCATG
AACGCAGAAAGTGGAGGGTCCAGCCAGCAACAAGAATTCCGGGAAGACAGAAATTTCATGGCACAGTGTCCAGCT
CGTCATATCTGCACAGTTCAGACCTGGACTTTTCTCATCAGGGCCCATGGAAAATGTCCGCGGATACCGCTGGTC
GACCCGGTTTGCTTTACTGAGCGTCATCCCAGGACGCACTACCGCCTGTTTCCGACGCTACAAATGCAAGGCTTG
TGGCCGGGTAATCTCACACTTGCCTCTGTCCACGGCCACATAGATGAATGGACTGTTCTGGGCTCCGGATACTAC
AAAGTATTCAACAAAGCGGATGGCAAACCTGCCACCAAGGTGGATCCGTTCAAGTTAGTCAAAGGTGTTGTCTTG
CCCTCCAAAGACAAATTCCGCGTCGAATACAAAGTCAACATCGATTGCGAAATTGCGTACCCCTTACTTCAGGCG
GACCAAAGGCCATACAGAACACAGGTTATGCTTCAGCGATCGCTCGACGCACCGATTAGGAGAGTGCATCAACGG
TCGACGAGGGTATCTGCGGAGCCGGAGGTGAAAATCATTATCCTTAACTCCTCCCTTCCAAAAAATTTCTAA
Gene >Hirsu2|5885
ATGACGCCACGGGCTATTATCACTCTCTTCGTCGCCAGCGTTCTCCATAACGCTATACCGGCAGTCGGTGTGGAC
TTGGCGAGCGTGTCTAGCGACAACAGCGAACACAGAGCAATCACGAGACTCATTTATCAAGCAATCAGGAGTGAG
GACCTTCCTCACCTTGACACTCCTATGCCCGGGCAACCGTGCTTCTATACCCGTGATCAACTAGAGCACCAAAAC
GCCGGGATTGATATTACTACTGTCCGCAATCAAGACTACGAAGTCATCAATGCTGGGACCGGCTCAATGGACATT
GCCATAACAACATCTACGGCAAAAATTGACAACTCTTCTGCTTCGTGGACAAGCGAGGGCCGAAATGCTATCGGA
GGCGAAGTGACAGTTGGCTACGGCTTTGCAGGTTTCGGTGCGTCTGCGACTGCTTCAGGAAGCCACTCTACCATG
AACGCAGAAAGTGGAGGGTCCAGCCAGCAACAAGAATTCCGGGAAGACAGAAATTTCATGGCACAGTGTCCAGCT
CGTCATATCTGCACAGTTCAGACCTGGACTTTTCTCATCAGGGCCCATGGAAAATGTCCGCGGATACCGCTGGTC
GACCCGGTTTGCTTTACTGAGCGTCATCCCAGGACGCACTACCGCCTGTTTCCGACGCTACAAATGCAAGGCTTG
TGGCCGGGTAATCTCACACTTGCCTCTGTCCACGGCCACATAGATGAATGGACTGTTCTGGGCTCCGGATACTAC
AAAGTATTCAACAAAGCGGATGGCAAACCTGCCACCAAGGTGGATCCGTTCAAGTTAGTCAAAGGTGTTGTCTTG
CCCTCCAAAGACAAATTCCGCGTCGAATACAAAGTCAACATCGATTGCGAAATTGCGTACCCCTTACTTCAGGCG
GACCAAAGGCCATACAGAACACAGGTTATGCTTCAGCGATCGCTCGACGCACCGATTAGGAGAGTGCATCAACGG
TCGACGAGGGTATCTGCGGAGCCGGAGGTGAAAATCATTATCCTTAACTCCTCCCTTCCAAAAAATTTCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail