Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5877
Gene name
LocationContig_2973:488..1471
Strand+
Gene length (bp)983
Transcript length (bp)834
Coding sequence length (bp)834
Protein length (aa) 278

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 19 41 22
2 53 75 22
3 102 121 19
4 133 155 22
5 178 200 22
6 212 234 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5877
MGWVVNASPEVDAESQYPTIIAICVVLSLLSIATVSCRLWIRATARGLAADDWMAALSMVFALIYSILCIAQTKY
GLGLPLKSRPQANTPIYARVNFAGRPIYQLGISFFKIALLISYLRLLKGTDQRNYRRAVWATIGLVFLAHLGCAL
SLIFACTPVDKSWNPARVGSCLPPAPSFTGYAVVTIVSDVVVALLPVPVLLRLNVRLEKKVGLIGIFMLGLFTTL
CSILRFLQIDRIQYGDGNSTMLVLWGTIEFNVGASIVNRTWSRPCPSWPPSA*
Coding >Hirsu2|5877
ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC
GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC
GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCAGACAAAGTAC
GGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGTCAACTTCGCGGGGCGG
CCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCGGCTGCTCAAGGGCACC
GACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCACCTCGGCTGCGCCCTG
TCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAGCTGCCTGCCGCCGGCG
CCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCGGTCCCGGTCCTG
CTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGGCCTCTTCACCACCCTC
TGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCACCATGCTCGTCCTCTGG
GGCACCATCGAGTTCAACGTCGGCGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCG
TCTGCATGA
Transcript >Hirsu2|5877
ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC
GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC
GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCAGACAAAGTAC
GGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGTCAACTTCGCGGGGCGG
CCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCGGCTGCTCAAGGGCACC
GACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCACCTCGGCTGCGCCCTG
TCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAGCTGCCTGCCGCCGGCG
CCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCGGTCCCGGTCCTG
CTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGGCCTCTTCACCACCCTC
TGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCACCATGCTCGTCCTCTGG
GGCACCATCGAGTTCAACGTCGGCGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCG
TCTGCATGA
Gene >Hirsu2|5877
ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC
GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC
GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCGTACGTTTTCC
TGTCTCCATCTGTCTCCCATCTCTCCCTCCTCTCTCTCTCGGAACAGGCAACGTTGCTGACGAACAAAAAAAAAA
CACAGAGACAAAGTACGGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGT
CAACTTCGCGGGGCGGCCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCG
GCTGCTCAAGGGCACCGACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCA
CCTCGGCTGCGCCCTGTCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAG
CTGCCTGCCGCCGGCGCCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCT
GCCGGTCCCGGTCCTGCTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGG
CCTCTTCACCACCCTCTGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCAC
CATGCTCGTCCTCTGGGGCACCATCGAGTTCAACGTCGGCGTACGTCCTCCCTCGCTCCCTCCCTCCCTCCTGCT
GCCCCAACCACTCTCTGACTTAGGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCGT
CTGCATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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