© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|5877 |
| Gene name | |
| Location | Contig_2973:488..1471 |
| Strand | + |
| Gene length (bp) | 983 |
| Transcript length (bp) | 834 |
| Coding sequence length (bp) | 834 |
| Protein length (aa) | 278 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 19 | 41 | 22 |
| 2 | 53 | 75 | 22 |
| 3 | 102 | 121 | 19 |
| 4 | 133 | 155 | 22 |
| 5 | 178 | 200 | 22 |
| 6 | 212 | 234 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|5877 MGWVVNASPEVDAESQYPTIIAICVVLSLLSIATVSCRLWIRATARGLAADDWMAALSMVFALIYSILCIAQTKY GLGLPLKSRPQANTPIYARVNFAGRPIYQLGISFFKIALLISYLRLLKGTDQRNYRRAVWATIGLVFLAHLGCAL SLIFACTPVDKSWNPARVGSCLPPAPSFTGYAVVTIVSDVVVALLPVPVLLRLNVRLEKKVGLIGIFMLGLFTTL CSILRFLQIDRIQYGDGNSTMLVLWGTIEFNVGASIVNRTWSRPCPSWPPSA* |
| Coding | >Hirsu2|5877 ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCAGACAAAGTAC GGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGTCAACTTCGCGGGGCGG CCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCGGCTGCTCAAGGGCACC GACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCACCTCGGCTGCGCCCTG TCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAGCTGCCTGCCGCCGGCG CCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCGGTCCCGGTCCTG CTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGGCCTCTTCACCACCCTC TGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCACCATGCTCGTCCTCTGG GGCACCATCGAGTTCAACGTCGGCGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCG TCTGCATGA |
| Transcript | >Hirsu2|5877 ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCAGACAAAGTAC GGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGTCAACTTCGCGGGGCGG CCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCGGCTGCTCAAGGGCACC GACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCACCTCGGCTGCGCCCTG TCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAGCTGCCTGCCGCCGGCG CCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCTGCCGGTCCCGGTCCTG CTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGGCCTCTTCACCACCCTC TGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCACCATGCTCGTCCTCTGG GGCACCATCGAGTTCAACGTCGGCGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCG TCTGCATGA |
| Gene | >Hirsu2|5877 ATGGGTTGGGTCGTCAACGCCAGCCCGGAGGTGGACGCCGAGTCGCAGTACCCGACCATCATCGCCATCTGCGTC GTGCTGTCGCTGCTCTCCATCGCCACCGTCAGCTGCCGGCTCTGGATCCGGGCGACGGCGCGCGGGCTGGCCGCC GACGACTGGATGGCGGCCCTGTCCATGGTCTTTGCGCTGATATACTCGATCCTGTGTATCGCCCGTACGTTTTCC TGTCTCCATCTGTCTCCCATCTCTCCCTCCTCTCTCTCTCGGAACAGGCAACGTTGCTGACGAACAAAAAAAAAA CACAGAGACAAAGTACGGGCTCGGGCTGCCGCTCAAGTCGCGGCCGCAGGCCAACACGCCCATCTACGCGCGCGT CAACTTCGCGGGGCGGCCCATCTACCAGCTCGGCATCTCCTTCTTCAAGATCGCGCTGCTCATCAGCTACCTGCG GCTGCTCAAGGGCACCGACCAGAGGAACTACCGGCGCGCGGTGTGGGCGACGATCGGCCTCGTCTTCCTCGCCCA CCTCGGCTGCGCCCTGTCGCTCATCTTCGCCTGCACGCCCGTCGACAAGTCGTGGAACCCGGCCCGGGTGGGCAG CTGCCTGCCGCCGGCGCCGTCCTTCACCGGCTACGCCGTCGTCACCATCGTCTCCGACGTCGTCGTCGCCCTGCT GCCGGTCCCGGTCCTGCTGCGGCTCAACGTGCGGCTGGAGAAGAAGGTGGGCCTGATCGGCATCTTCATGCTCGG CCTCTTCACCACCCTCTGCTCCATCCTGCGCTTCCTGCAGATCGACCGGATCCAGTACGGCGACGGCAACTCCAC CATGCTCGTCCTCTGGGGCACCATCGAGTTCAACGTCGGCGTACGTCCTCCCTCGCTCCCTCCCTCCCTCCTGCT GCCCCAACCACTCTCTGACTTAGGCGTCCATCGTGAACAGAACATGGTCTCGTCCCTGCCCTTCCTGGCCCCCGT CTGCATGA |