Protein ID | Hirsu2|5867 |
Gene name | |
Location | Contig_297:6103..6537 |
Strand | - |
Gene length (bp) | 434 |
Transcript length (bp) | 372 |
Coding sequence length (bp) | 372 |
Protein length (aa) | 124 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0793 | 0.0611 | 0.9317 | 0.1032 | 0.1086 | 0.0114 | 0.0985 | 0.0997 | 0.0553 | 0.0044 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 16 | 0.999788 |
Orthofinder run ID | 4 |
Orthogroup | 132 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|5867 MKFTAAAVLLASVAYATQGTNMETEGRYRGGAFDFDGLIGKLGPLGQKALCAGPCVAEVANKLKCGGKGLVDTAC ENIDNIKRRSEPCLKKCRIEPRFIEIGHQAAHWACNKRHEHGGESYRG* |
Coding | >Hirsu2|5867 ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGAG ATCGGCCACCAGGCTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA |
Transcript | >Hirsu2|5867 ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGAG ATCGGCCACCAGGCTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA |
Gene | >Hirsu2|5867 ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGGT GAGTCGCGCCGGGCCTGTCCGCCTCGGGCGATACAGACTGCTGACCGCGAGCCACAACAGAGATCGGCCACCAGG CTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA |