Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|5867
Gene name
LocationContig_297:6103..6537
Strand-
Gene length (bp)434
Transcript length (bp)372
Coding sequence length (bp)372
Protein length (aa) 124

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.0793 0.0611 0.9317 0.1032 0.1086 0.0114 0.0985 0.0997 0.0553 0.0044

SignalP

SignalP signal predicted Location Score
Yes 1 - 16 0.999788

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup132
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4594
Ophiocordyceps australis map64 (Brazil) OphauB2|8119
Ophiocordyceps camponoti-floridani Ophcf2|02435
Ophiocordyceps camponoti-rufipedis Ophun1|4175
Ophiocordyceps kimflemingae Ophio5|7212
Ophiocordyceps kimflemingae Ophio5|7535
Ophiocordyceps kimflemingae Ophio5|7863
Ophiocordyceps subramaniannii Hirsu2|1066
Ophiocordyceps subramaniannii Hirsu2|2840
Ophiocordyceps subramaniannii Hirsu2|5867 (this protein)
Ophiocordyceps subramaniannii Hirsu2|7262
Ophiocordyceps subramaniannii Hirsu2|9763

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|5867
MKFTAAAVLLASVAYATQGTNMETEGRYRGGAFDFDGLIGKLGPLGQKALCAGPCVAEVANKLKCGGKGLVDTAC
ENIDNIKRRSEPCLKKCRIEPRFIEIGHQAAHWACNKRHEHGGESYRG*
Coding >Hirsu2|5867
ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG
GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC
TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC
GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGAG
ATCGGCCACCAGGCTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA
Transcript >Hirsu2|5867
ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG
GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC
TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC
GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGAG
ATCGGCCACCAGGCTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA
Gene >Hirsu2|5867
ATGAAGTTCACCGCCGCCGCCGTCCTCCTCGCCAGCGTCGCCTACGCGACCCAGGGCACCAACATGGAGACCGAG
GGCCGCTACAGGGGCGGCGCCTTCGACTTCGACGGCCTCATCGGCAAGCTCGGCCCGCTGGGCCAGAAGGCCCTC
TGCGCCGGCCCCTGCGTCGCCGAGGTCGCCAACAAGCTCAAGTGCGGCGGCAAGGGCCTGGTCGACACCGCCTGC
GAGAACATCGACAACATCAAGCGCCGGTCGGAGCCGTGCCTGAAGAAGTGCCGCATCGAGCCCCGCTTCATCGGT
GAGTCGCGCCGGGCCTGTCCGCCTCGGGCGATACAGACTGCTGACCGCGAGCCACAACAGAGATCGGCCACCAGG
CTGCCCACTGGGCCTGCAACAAGCGCCACGAGCACGGCGGCGAGAGCTACCGCGGCTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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